Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CBP.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G62390 108 / 1e-25 ATBAG7 BCL-2-associated athanogene 7 (.1) AT3G29310 52 / 5e-07 calmodulin-binding protein-related (.1) AT2G46240 49 / 7e-06 ATBAG6, BAG6 ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 6, BCL-2-associated athanogene 6 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G126800 [exp] 578 / 0 AT5G62390 311 / 1e-102 BCL-2-associated athanogene 7 (.1) Potri.017G091100 [exp] 65 / 4e-11 AT3G29310 141 / 2e-36 calmodulin-binding protein-related (.1) Potri.002G166300 [exp] 54 / 1e-07 AT2G46240 140 / 2e-33 ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 6, BCL-2-associated athanogene 6 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031147 [exp] 352 / 7e-119 AT5G62390 331 / 3e-110 BCL-2-associated athanogene 7 (.1) Lus10031724 [exp] 346 / 1e-116 AT5G62390 334 / 1e-111 BCL-2-associated athanogene 7 (.1) Lus10038064 [exp] 70 / 9e-13 AT3G29310 139 / 7e-36 calmodulin-binding protein-related (.1) Lus10026469 [exp] 67 / 1e-11 AT3G29310 140 / 3e-36 calmodulin-binding protein-related (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF02179 [poplar] [flax] BAG BAG domain
Representative CDS sequence Show only first row Show all	>Potri.012G126000.2 pacid=42783286 polypeptide=Potri.012G126000.2.p locus=Potri.012G126000 ID=Potri.012G126000.2.v4.1 annot-version=v4.1 ATGAGCCGATTTAGAAGAATCGAAATCTTTGAGCCGCACTATGCTCCCGTCTTACTCAGAGAAACCTCCATTTTCACTCCGAAATCACTCGTTTTTCCAT CCTTTGAAGAACCCGAGGAGCTCGGTTTTGCTGCTTTCGATCTCTTGTGCTCGAAGCCTACCTCTTTCGAGGTTTTTGATACAGTGACTGATCTGGTTAA AACGCGTTCGTTTTACACGAGCAAGAGTATCCACGACCGATTTGAGACTGACTTGCGCTTGCACACTCTTCATGATCGCGTCAGCGAGCTCGAGTCAAAG TTTGACAGGCTAGTCAACCCGAAGATCAACGGCGGGAGTGGTGCTGAGAGGAAGTACACGTGGACAGCGGAGATTAAAGGACCGGTGACAGAAAGGAAGT ATAAACTGACAGCAGAGATCAAAGGAGGAGAAGAGAAGAAGAAGAAAGAAGAGAAGACTAAGAATTATAAATGGACTGCTGAGATTAAAGGAAAAGGAGA GGAAGAGATTCCTATCTCGCGGAAGTATACGTTTGAAACATCAAGTGGATTTGCAGGTGACGGTAGCAAATCAGAAAAGAAAGAGAAGGAGAAGGAGAAG GAGAAAAAGATAGAGGCTAAGGAGAAGAAAGGACAGTGCGCCACGCGTCTTGTTGAAATCGAAGATTACCCTGATCATGGAGCTGTTGTTTTGCGCCAGG CATTTGCAAAGAGAGCTGGAGTGGTGGAGAAGAGGAAGGGGAAGAAGAAGGAATTGTCGCCTCAGGATGCAGCATTGTTGATTCAGATTACATTTAGGGC TTATTTGATCCGGAGATCACAGGCACTTCGTGCGCTTAGAGAGTTGGCGATTGCAAAAGCTAAGTTGAAGGAGCTTAGAGCTTTGTTTAATAACTTTTCA TATAGGCGCCATGTTGCGCGTGATGCTGAGGAGAGGCAGAGGTTTTCGGAGAAAATTATTGTGCTGCTTCTTACTGTTGATGCCATTGAGGGAGCTGATC TAATGGTTCGAGCTGCAAAGCGGTCAATGGTGGATGAGCTGGAGGCAATGCTTGATGTGGTGGACCCCCAGCCTGCCGGTAAATCACTTTCTATGAGAAG ACGAACATTTGATATGCCTGATGGTATCATTCGAAAGGAAATTGCTGAAGGTGTGGCCCAGGTTGTCCAGATGCTTGATAAAGAAGAGGATGGCACCGCC ACCTTTGAGGCATGCTTGTAA
AA sequence Show only first row Show all	>Potri.012G126000.2 pacid=42783286 polypeptide=Potri.012G126000.2.p locus=Potri.012G126000 ID=Potri.012G126000.2.v4.1 annot-version=v4.1 MSRFRRIEIFEPHYAPVLLRETSIFTPKSLVFPSFEEPEELGFAAFDLLCSKPTSFEVFDTVTDLVKTRSFYTSKSIHDRFETDLRLHTLHDRVSELESK FDRLVNPKINGGSGAERKYTWTAEIKGPVTERKYKLTAEIKGGEEKKKKEEKTKNYKWTAEIKGKGEEEIPISRKYTFETSSGFAGDGSKSEKKEKEKEK EKKIEAKEKKGQCATRLVEIEDYPDHGAVVLRQAFAKRAGVVEKRKGKKKELSPQDAALLIQITFRAYLIRRSQALRALRELAIAKAKLKELRALFNNFS YRRHVARDAEERQRFSEKIIVLLLTVDAIEGADLMVRAAKRSMVDELEAMLDVVDPQPAGKSLSMRRRTFDMPDGIIRKEIAEGVAQVVQMLDKEEDGTA TFEACL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G62390		ATBAG7	BCL-2-associated athanogene 7 ...		Potri.012G126000 [exp]	0	1	CBP.2
AT3G09070			Protein of unknown function (D...		Potri.006G096600 [exp]	2.44	0.8423
AT5G23420		HMGB6	high-mobility group box 6 (.1....		Potri.007G000900 [exp]	2.64	0.8705
AT5G67100		ICU2	INCURVATA2, DNA-directed DNA p...		Potri.007G045300 [exp]	10.95	0.8026
AT3G16080			Zinc-binding ribosomal protein...		Potri.001G183200 [exp]	12.84	0.8263	Pt-RPL37.3
AT3G51280			Tetratricopeptide repeat (TPR)...		Potri.005G112100 [exp]	18.33	0.8138
AT5G23400			Leucine-rich repeat (LRR) fami...		Potri.010G040200 [exp]	25.69	0.7878
AT3G11500			Small nuclear ribonucleoprotei...		Potri.016G078100 [exp]	27.65	0.7863
AT3G18800			unknown protein		Potri.019G006500 [exp]	29.79	0.8113
AT5G47520		AtRABA5a	RAB GTPase homolog A5A (.1)		Potri.006G015400 [exp]	36.53	0.7270	Pt-RAB11.16
AT3G19184	B3		AP2/B3-like transcriptional fa...		Potri.009G103100 [exp]	42.62	0.7735

Compare expression of checked genes

Potri.012G126000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.