Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ERL1.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G62230 1412 / 0 ERL1 ERECTA-like 1 (.1.2) AT5G07180 1391 / 0 ERL2 ERECTA-like 2 (.1) AT2G26330 1141 / 0 QRP1, ER QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1, ERECTA, Leucine-rich receptor-like protein kinase family protein (.1) AT2G33170 493 / 2e-157 Leucine-rich repeat receptor-like protein kinase family protein (.1) AT5G63930 493 / 3e-157 Leucine-rich repeat protein kinase family protein (.1) AT5G44700 489 / 1e-154 GSO2, EDA23 GASSHO 2, EMBRYO SAC DEVELOPMENT ARREST 23, Leucine-rich repeat transmembrane protein kinase (.1) AT1G17230 485 / 2e-154 Leucine-rich receptor-like protein kinase family protein (.1) AT3G49670 478 / 1e-152 BAM2 BARELY ANY MERISTEM 2, Leucine-rich receptor-like protein kinase family protein (.1) AT5G65700 473 / 7e-151 BAM1 BARELY ANY MERISTEM 1, Leucine-rich receptor-like protein kinase family protein (.1.2) AT5G07280 470 / 7e-148 EXS, EMS1 EXTRA SPOROGENOUS CELLS, EXCESS MICROSPOROCYTES1, Leucine-rich repeat transmembrane protein kinase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G132200 [exp] 1657 / 0 AT5G62230 1404 / 0.0 ERECTA-like 1 (.1.2) Potri.006G220100 [exp] 1172 / 0 AT2G26330 1547 / 0.0 QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1, ERECTA, Leucine-rich receptor-like protein kinase family protein (.1) Potri.011G139700 [exp] 493 / 2e-157 AT1G17230 1363 / 0.0 Leucine-rich receptor-like protein kinase family protein (.1) Potri.019G025500 [exp] 490 / 2e-156 AT5G63930 1320 / 0.0 Leucine-rich repeat protein kinase family protein (.1) Potri.003G174900 [exp] 485 / 2e-154 AT2G33170 1348 / 0.0 Leucine-rich repeat receptor-like protein kinase family protein (.1) Potri.001G053400 [exp] 482 / 4e-153 AT2G33170 1311 / 0.0 Leucine-rich repeat receptor-like protein kinase family protein (.1) Potri.013G051300 [exp] 481 / 8e-153 AT5G63930 1281 / 0.0 Leucine-rich repeat protein kinase family protein (.1) Potri.003G157300 [exp] 477 / 1e-152 AT4G20270 1285 / 0.0 BARELY ANY MERISTEM 3, Leucine-rich receptor-like protein kinase family protein (.1) Potri.001G073600 [exp] 471 / 2e-150 AT4G20270 1279 / 0.0 BARELY ANY MERISTEM 3, Leucine-rich receptor-like protein kinase family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031689 [exp] 1387 / 0 AT5G62230 1437 / 0.0 ERECTA-like 1 (.1.2) Lus10031108 [exp] 1383 / 0 AT5G62230 1422 / 0.0 ERECTA-like 1 (.1.2) Lus10038071 [exp] 1132 / 0 AT2G26330 1554 / 0.0 QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1, ERECTA, Leucine-rich receptor-like protein kinase family protein (.1) Lus10009790 [exp] 1104 / 0 AT2G26330 1547 / 0.0 QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1, ERECTA, Leucine-rich receptor-like protein kinase family protein (.1) Lus10011761 [exp] 521 / 1e-169 AT5G63930 913 / 0.0 Leucine-rich repeat protein kinase family protein (.1) Lus10019248 [exp] 469 / 2e-149 AT5G65700 1479 / 0.0 BARELY ANY MERISTEM 1, Leucine-rich receptor-like protein kinase family protein (.1.2) Lus10036251 [exp] 473 / 1e-148 AT4G20140 1495 / 0.0 GASSHO1, Leucine-rich repeat transmembrane protein kinase (.1) Lus10039641 [exp] 457 / 2e-144 AT5G65700 1580 / 0.0 BARELY ANY MERISTEM 1, Leucine-rich receptor-like protein kinase family protein (.1.2) Lus10011576 [exp] 449 / 2e-143 AT5G65700 1330 / 0.0 BARELY ANY MERISTEM 1, Leucine-rich receptor-like protein kinase family protein (.1.2) Lus10038392 [exp] 453 / 3e-141 AT4G20140 1376 / 0.0 GASSHO1, Leucine-rich repeat transmembrane protein kinase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0016 [poplar] [flax] PKinase PF00069 [poplar] [flax] Pkinase Protein kinase domain CL0016 [poplar] [flax] PF08263 [poplar] [flax] LRRNT_2 Leucine rich repeat N-terminal domain CL0022 [poplar] [flax] LRR PF13855 [poplar] [flax] LRR_8 Leucine rich repeat
Representative CDS sequence Show only first row Show all	>Potri.012G130400.2 pacid=42782626 polypeptide=Potri.012G130400.2.p locus=Potri.012G130400 ID=Potri.012G130400.2.v4.1 annot-version=v4.1 ATGAAGCTAGTAGTGGTTTTCAAGCACTGTTTAGCAATGGCGGTGCTGCTTCTGCTTCTCATGTCTCCTCTTGTTTCCCCACTTAACGACGAGGGGAAAG CATTGATGTCTATTAAGGAATCATTTAGCAATGTGGTGAATGTGCTTCTTGACTGGGATGATGTGCACAATGAAGATTTTTGTTCTTGGCGTGGTGTGTT TTGTGACAATGTCAGCCTCTCCGTTGTTTCTCTTAACCTGTCCAATTTGAACCTTGGTGGTGAAATTTCTCCTGCCATTGGAGATTTGAGAAACTTGCAA TCCATAGACTTTCAAGGGAATAAGTTGACTGGTCAAATCCCAGAAGAGATCGGCAATTGTGCTTCATTATTCAATCTGGATCTTTCTGATAACTTGCTTT ATGGTGACATGCCCTTTTCTATTTCCAAGTTGAAGCAACTTGATACCCTAAATTTGAAGAACAACCAGCTTACTGGTCCTATTCCTTCAACTTTAACCCA AATTCCAAATCTGAAGACACTTGACCTTGCTAAAAACCAGCTGACCGGTGAGATACCAAGACTGATCTACTGGAATGAAGTCTTACAGTACCTCGGATTA CGTGGCAATTTGTTGACTGGAACACTGTCAGAAGATATGTGTCAGTTGACTGGCTTGTGGTATTTTGATGTGAGAGGAAATAACCTATCTGGCACAATTC CTAGTAGCATCGGCAACTGTACCAGCTTTGAGATACTGGATATATCATACAATCAGATCAGTGGGGAGATACCATACAACATTGGCTTCTTGCAAGTTGC TACTCTGTCCCTTCAAGGTAATAGTCTCACCGGGAAGATTCCAGAAGTGATTGGTTTAATGCAGGCCTTGGCTGTTTTGGATTTGAGTGACAATGAGCTA GTTGGACCAATTCCCCCTATACTTGGCAATTTGTCGTACACTGGGAAACTGTATCTTCATGGCAACAAGCTTACAGGACCAATTCCACCCGAGCTTGGAA ACATGTCAAAGCTAAGCTACTTGCAATTGAATGACAACCAGCTGGTTGGAAGAATTCCTCCTGAACTTGGGATGCTCGAACAGTTGTTTGAATTGAATCT TGCTAACAACCATCTTGAAGGCCCCATTCCGAACAATATCAGTTCATGCAGGGCTTTGAACCAATTAAATGTATATGGTAATCACTTGAGTGGAATCATA GCTTCAGGTTTCAAGGGTCTTGAAAGTCTGACTTACCTAAATCTTTCTTCAAATGATTTCAAAGGCAGTATTCCTATTGAGCTGGGACACATTATCAATT TGGATACATTGGATCTCTCCAGCAATAACTTTTCGGGGCCCATTCCAGCTTCTATTGGTGATCTGGAGCACCTTCTCATTTTGAATTTGAGCAGGAATCA TCTTCATGGAAGGTTGCCAGCTGAATTTGGGAATCTAAGAAGCATACAAGCTATAGACATGTCTTTCAACAATGTGACTGGTAGCATTCCAGTGGAATTG GGGCAGTTGCAAAACATTGTTACTCTGATCCTGAACAACAATGACTTGCAAGGAGAAATCCCTGATCAACTTACCAATTGTTTCAGCCTTGCCAATTTGA ATTTCTCATACAACAATTTGTCAGGAATTGTGCCACCTATTAGAAACCTGACAAGGTTTCCGCCAGACAGTTTTATTGGAAATCCTTTGTTGTGTGGCAA CTGGTTGGGATCAGTATGTGGCCCTTATGTCCTGAAGTCTAAAGTGATCTTCTCTAGAGCTGCAGTTGTCTGTATCACGTTGGGATTCGTAACATTATTG TCCATGATTGTTGTTGTGATTTACAAATCCAACCAACGGAAACAATTGACAATGGGATCTGACAAAACCCTACAAGGTCCTCCCAAGCTTGTAGTCCTTC ACATGGACATGGCTATTCACACCTTCGATGACATAATGAGGAACACTGAGAATTTAAGTGAGAAGTATATTATAGGTTATGGTGCATCTAGCACAGTATA CAAGTGTGTGTTGAAAAATTCCCGACCACTTGCAATTAAGCGACTCTACAATCAGTACCCATACAACTTGCATGAGTTTGAAACTGAACTTGAGACCATT GGAAGCATCAGACACCGGAATATAGTCAGCTTACATGGTTATGCACTATCTCCTCGTGGGAACCTTCTCTTCTATGACTATATGAAGAATGGTTCTCTGT GGGATCTTCTTCATGGATCATCCAAAAAGGTTAAGCTTGACTGGGAAACTCGATTGAAAGTAGCAGTTGGTGCTGCTCAAGGACTTGCTTATCTTCACCA TGATTGCAACCCTCGGATTATCCACAGGGATGTGAAGTCCTCAAATATTTTGCTGGATGAGGATTTTGAAGCTCACTTGTCTGATTTTGGAATAGCTAAA TGCATCCCAACTACAAAATCTCATGCCTCAACTTTTGTCCTGGGGACCATTGGCTACATTGATCCAGAGTATGCCCGGACATCGCGGCTAACTGAAAAAT CAGATGTTTATAGTTTTGGCATTGTTCTCTTGGAGCTTCTAACTGGGAAAAAGGCTGTGGATAATGAGTCTAATTTGCAGCAACTGATTTTATCCAGGGC TGATGACAACACTGTAATGGAGGCTGTTGACCCAGAGGTTTCCGTTACATGCATGGATTTGACGCATGTAAAGAAGAGTTTCCAACTTGCATTACTGTGC ACCAAGCGCCATCCTTCAGAGAGACCAACCATGCAGGATGTGTCCAGGGTCTTGGTTTCATTTCTTCCAGCTCTTCCTACAAAAGCTTCTCTTCTTCCAA AGCCTATTGACTATGCCAAATTTGTCATCGACAAAGGACAGCAGCAGCAGCCAATAGTTAACCAGCAGCAACCTTCGCAGGAAAACAACTCTTCTGATGC ACAGTGGTTCGTGAGGTTCAAAGAAGTTGTATCAAAGAACACTCTTTAA
AA sequence Show only first row Show all	>Potri.012G130400.2 pacid=42782626 polypeptide=Potri.012G130400.2.p locus=Potri.012G130400 ID=Potri.012G130400.2.v4.1 annot-version=v4.1 MKLVVVFKHCLAMAVLLLLLMSPLVSPLNDEGKALMSIKESFSNVVNVLLDWDDVHNEDFCSWRGVFCDNVSLSVVSLNLSNLNLGGEISPAIGDLRNLQ SIDFQGNKLTGQIPEEIGNCASLFNLDLSDNLLYGDMPFSISKLKQLDTLNLKNNQLTGPIPSTLTQIPNLKTLDLAKNQLTGEIPRLIYWNEVLQYLGL RGNLLTGTLSEDMCQLTGLWYFDVRGNNLSGTIPSSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNSLTGKIPEVIGLMQALAVLDLSDNEL VGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNDNQLVGRIPPELGMLEQLFELNLANNHLEGPIPNNISSCRALNQLNVYGNHLSGII ASGFKGLESLTYLNLSSNDFKGSIPIELGHIINLDTLDLSSNNFSGPIPASIGDLEHLLILNLSRNHLHGRLPAEFGNLRSIQAIDMSFNNVTGSIPVEL GQLQNIVTLILNNNDLQGEIPDQLTNCFSLANLNFSYNNLSGIVPPIRNLTRFPPDSFIGNPLLCGNWLGSVCGPYVLKSKVIFSRAAVVCITLGFVTLL SMIVVVIYKSNQRKQLTMGSDKTLQGPPKLVVLHMDMAIHTFDDIMRNTENLSEKYIIGYGASSTVYKCVLKNSRPLAIKRLYNQYPYNLHEFETELETI GSIRHRNIVSLHGYALSPRGNLLFYDYMKNGSLWDLLHGSSKKVKLDWETRLKVAVGAAQGLAYLHHDCNPRIIHRDVKSSNILLDEDFEAHLSDFGIAK CIPTTKSHASTFVLGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGKKAVDNESNLQQLILSRADDNTVMEAVDPEVSVTCMDLTHVKKSFQLALLC TKRHPSERPTMQDVSRVLVSFLPALPTKASLLPKPIDYAKFVIDKGQQQQPIVNQQQPSQENNSSDAQWFVRFKEVVSKNTL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G62230		ERL1	ERECTA-like 1 (.1.2)		Potri.012G130400 [exp]	0	1	ERL1.2
AT5G48270			Plant protein of unknown funct...		Potri.010G047700 [exp]	2.00	0.9462
AT5G46880	HD	HDG5, HB-7	HOMEODOMAIN GLABROUS 5, homeob...		Potri.003G096000 [exp]	2.23	0.9504
AT2G18360			alpha/beta-Hydrolases superfam...		Potri.004G155800 [exp]	3.16	0.9360
AT3G59420		ACR4	crinkly4 (.1)		Potri.017G029900 [exp]	3.46	0.9453	Pt-ACR4.2
					Potri.002G252400 [exp]	5.65	0.9367
AT3G59420		ACR4	crinkly4 (.1)		Potri.007G128400 [exp]	6.92	0.9196	ACR4.3
AT5G16110			unknown protein		Potri.005G108633 [exp]	8.66	0.9032
AT1G03170		FAF2	FANTASTIC FOUR 2, Protein of u...		Potri.005G209100 [exp]	8.94	0.8964
AT5G28300	Trihelix		Duplicated homeodomain-like su...		Potri.013G039100 [exp]	9.16	0.9075
AT3G49900			Phototropic-responsive NPH3 fa...		Potri.005G149400 [exp]	13.74	0.8831

Compare expression of checked genes

Potri.012G130400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.