Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-ATKEA5.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G51710 829 / 0 ATKEA5, KEA5 K+ efflux antiporter 5, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 5, K+ efflux antiporter 5 (.1), K+ efflux antiporter 5 (.2) AT2G19600 612 / 0 ATKEA4 K+ efflux antiporter 4, K+ efflux antiporter 4, K+ efflux antiporter 4 (.1) AT5G11800 612 / 0 ATKEA6, KEA6 K+ efflux antiporter 6, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 6, K+ efflux antiporter 6 (.1) AT4G00630 97 / 7e-21 ATKEA2, KEA2 K+ efflux antiporter 2, K+ efflux antiporter 2 (.1), K+ efflux antiporter 2 (.2) AT1G01790 96 / 3e-20 ATKEA1, KEA1 K+ efflux antiporter 1, K+ EFFLUX ANTIPORTER 1, K+ efflux antiporter 1 (.1) AT4G04850 90 / 1e-18 ATKEA3, KEA3 K+ efflux antiporter 3, K+ efflux antiporter 3 (.1), K+ efflux antiporter 3 (.2) AT1G64170 49 / 9e-06 ATCHX16 cation/H+ exchanger 16, cation/H+ exchanger 16, cation/H+ exchanger 16 (.1) AT4G23700 43 / 0.0006 ATCHX17 cation/H+ exchanger 17, cation/H+ exchanger 17, cation/H+ exchanger 17 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G132400 [exp] 933 / 0 AT5G51710 791 / 0.0 K+ efflux antiporter 5, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 5, K+ efflux antiporter 5 (.1), K+ efflux antiporter 5 (.2) Potri.006G230400 [exp] 606 / 0 AT5G11800 731 / 0.0 K+ efflux antiporter 6, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 6, K+ efflux antiporter 6 (.1) Potri.018G054100 [exp] 605 / 0 AT5G11800 740 / 0.0 K+ efflux antiporter 6, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 6, K+ efflux antiporter 6 (.1) Potri.014G080800 [exp] 97 / 1e-20 AT1G01790 1300 / 0.0 K+ efflux antiporter 1, K+ EFFLUX ANTIPORTER 1, K+ efflux antiporter 1 (.1) Potri.002G157200 [exp] 94 / 7e-20 AT1G01790 1343 / 0.0 K+ efflux antiporter 1, K+ EFFLUX ANTIPORTER 1, K+ efflux antiporter 1 (.1) Potri.009G080800 [exp] 85 / 7e-17 AT4G04850 841 / 0.0 K+ efflux antiporter 3, K+ efflux antiporter 3 (.1), K+ efflux antiporter 3 (.2) Potri.013G142301 [exp] 45 / 0.0001 AT5G41610 1067 / 0.0 cation/H+ exchanger 18, ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18, cation/H+ exchanger 18 (.1), cation/H+ exchanger 18 (.2) Potri.001G096320 [exp] 45 / 0.0001 AT5G41610 1069 / 0.0 cation/H+ exchanger 18, ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18, cation/H+ exchanger 18 (.1), cation/H+ exchanger 18 (.2) Potri.003G134900 [exp] 45 / 0.0001 AT5G41610 989 / 0.0 cation/H+ exchanger 18, ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18, cation/H+ exchanger 18 (.1), cation/H+ exchanger 18 (.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031106 [exp] 789 / 0 AT5G51710 907 / 0.0 K+ efflux antiporter 5, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 5, K+ efflux antiporter 5 (.1), K+ efflux antiporter 5 (.2) Lus10031687 [exp] 729 / 0 AT5G51710 833 / 0.0 K+ efflux antiporter 5, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 5, K+ efflux antiporter 5 (.1), K+ efflux antiporter 5 (.2) Lus10040549 [exp] 578 / 0 AT2G19600 851 / 0.0 K+ efflux antiporter 4, K+ efflux antiporter 4, K+ efflux antiporter 4 (.1) Lus10008002 [exp] 531 / 0 AT2G19600 781 / 0.0 K+ efflux antiporter 4, K+ efflux antiporter 4, K+ efflux antiporter 4 (.1) Lus10007999 [exp] 392 / 2e-132 AT2G19600 569 / 0.0 K+ efflux antiporter 4, K+ efflux antiporter 4, K+ efflux antiporter 4 (.1) Lus10008000 [exp] 110 / 2e-27 AT5G51710 149 / 3e-42 K+ efflux antiporter 5, ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 5, K+ efflux antiporter 5 (.1), K+ efflux antiporter 5 (.2) Lus10020485 [exp] 78 / 5e-15 AT4G04850 704 / 0.0 K+ efflux antiporter 3, K+ efflux antiporter 3 (.1), K+ efflux antiporter 3 (.2) Lus10007104 [exp] 77 / 1e-14 AT4G04850 936 / 0.0 K+ efflux antiporter 3, K+ efflux antiporter 3 (.1), K+ efflux antiporter 3 (.2) Lus10018844 [exp] 65 / 2e-10 AT4G00630 1352 / 0.0 K+ efflux antiporter 2, K+ efflux antiporter 2 (.1), K+ efflux antiporter 2 (.2) Lus10024717 [exp] 47 / 4e-05 AT4G23700 538 / 0.0 cation/H+ exchanger 17, cation/H+ exchanger 17, cation/H+ exchanger 17 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0064 [poplar] [flax] CPA_AT PF00999 [poplar] [flax] Na_H_Exchanger Sodium/hydrogen exchanger family
Representative CDS sequence Show only first row Show all	>Potri.012G130500.1 pacid=42783672 polypeptide=Potri.012G130500.1.p locus=Potri.012G130500 ID=Potri.012G130500.1.v4.1 annot-version=v4.1 ATGAAAAGAGGAGGGTTTGCATGTGGATTTGGATTCAGCAGGTGCTGTTGTTTGCTCTTGATTTTGGTCTGTGTAAATGGGAGATCCGATAAGGAAGTAA GGGAGAGGTTTTATGGGAATTTGGTGAATTCATCAGCACCTGATAATGGAGAAGGAAGTATTGCTAAAATGTTTGATCGTGTTCTTGAAAAAGAGTTCTC TGACAATGATCAACCTGAAGGTTCTGATGGAAGCAGCTTCAACAACAGTGTAGCTGACCAGCAAGCTGTTTTGGAGACTGTTGCTAAAATCACTCATGAG AAGGGCAAGAAAAACGATACACAAGTGGCTAATGGATCTAGACCTTTTCAGCTTCAAGATGTATTTTCACTGGAAAATGAGGAATCTGAGGATATGGCAA CCCTGATTGACAAAAAGGACAATGTATTTGTCATGTCGAACAAGAAATCCAAGTATCCAATTCTTCAAGTAGATTTGAGATTAATTTCTGATCTAGTGGT TGCCATAGTTTCTGCTGCCATTGGTGGAATTATCTTTTCTTGTTTGGGTCAACCGGTTATTGTTGGCTATCTTCTAGCAGGTTCCATCATTGGACCAGGG GGTCTGAATTTCATCAGTGAGATGGTACAGGTCGAAACTGTTGCACAGTTTGGTGTTGTGTTTCTTCTTTTTGCGTTAGGACTGGAGTTTTCTTTGACTA AGTTAAAAGTTGTGGGCCCTGTAGCTGTTCTTGGAGGGATGCTTCAAATTGTAATTTTTATGTGCTTGTGTGGCATAGTTGCTGCGATGTGTGGAGCAAA GTTGTCTGAGGGTGTATTTGTGGGTTCGTTCCTGTCAATGTCATCAACAGCAGTGGTGGTGAAATTTTTGATAGAACGGAATAGTAGTAATTCTCTTCAT GGTCAAGTTACCATCGGGACCCTGATTTTTCAGGATTGTGCTATTGGTTTATTATTTGCTTTGCTTCCAGTTTTGGGTGGCAACAGTGGCGCTCTGCAAG GAATGATTTCAATGGGGAAGTTGTTATTGGTCTTGTCCGTATACCTCACAGCTGCATCTTTTATGTCCTGGTCGTTTGTTCCTCGCTTTCTTAAGTTAAT GATACAGCTATCATCTCAAACAAATGAACTTTATCAGCTTGCTGCTGTTGCTTTCTGCTTGTTGTCTGCTTGGTGCAGTGACAAGCTGGGCCTTAGTCTT GAGTTGGGTTCATTCGTGGCTGGAATCATGATATCTACCACCGACTTTGCACAGCATACTTTAGAACAGGTGGAACCAATCAGGAACCTGTTCGCAGCTC TCTTTCTTTCTAGTATTGGAATGCTCATACATGTACATTTTCTGTGGAACCATGTGGATATATTGCTAGCGTCTGTGATTCTGGTTATTGTTGTCAAGAC AACCATTGCTGCTGCAGTTACTAAAGCCTTCGGATATAGCATCAGGACATCATTCCACGTTGGAGTATTGCTTGCTCAAATTGGAGAATTTGCTTTTGTT CTTCTGAGTCGTGCCTCCAATCTTCATCTCATTGAGGGAAAGATGTATCTTCTTCTTCTTGGAACAACAGCTCTTAGTCTGGTAACAACTCCTCTCCTGT TCAAGTTGATACCTAACGTCATGAATTTGGGCATCCTTTTGCAATGGTTTCCATCAGAGAGCAGCACTCCAAATAAATGGTTTCCATCGGAGAATGGTAC TCCAAATGAGGAAAGAGTTTCTATGATTGAAGTACGTAACAGATTGTTGTGA
AA sequence Show only first row Show all	>Potri.012G130500.1 pacid=42783672 polypeptide=Potri.012G130500.1.p locus=Potri.012G130500 ID=Potri.012G130500.1.v4.1 annot-version=v4.1 MKRGGFACGFGFSRCCCLLLILVCVNGRSDKEVRERFYGNLVNSSAPDNGEGSIAKMFDRVLEKEFSDNDQPEGSDGSSFNNSVADQQAVLETVAKITHE KGKKNDTQVANGSRPFQLQDVFSLENEESEDMATLIDKKDNVFVMSNKKSKYPILQVDLRLISDLVVAIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPG GLNFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGPVAVLGGMLQIVIFMCLCGIVAAMCGAKLSEGVFVGSFLSMSSTAVVVKFLIERNSSNSLH GQVTIGTLIFQDCAIGLLFALLPVLGGNSGALQGMISMGKLLLVLSVYLTAASFMSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSL ELGSFVAGIMISTTDFAQHTLEQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIVVKTTIAAAVTKAFGYSIRTSFHVGVLLAQIGEFAFV LLSRASNLHLIEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLGILLQWFPSESSTPNKWFPSENGTPNEERVSMIEVRNRLL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G51710		ATKEA5, KEA5	K+ efflux antiporter 5, ARABID...		Potri.012G130500 [exp]	0	1	Pt-ATKEA5.1
AT5G13500			unknown protein		Potri.003G195600 [exp]	3.46	0.9132
AT2G35880			TPX2 (targeting protein for Xk...		Potri.016G066600 [exp]	4.47	0.9150
AT1G15690		FUGU5, AtVHP1;1...	FUGU 5, ARABIDOPSIS THALIANA V...		Potri.018G119500 [exp]	6.32	0.9138
AT5G61840		GUT1, IRX10-L	Exostosin family protein (.1)		Potri.012G109600 [exp]	14.14	0.8883
AT3G57220			Glycosyl transferase family 4 ...		Potri.006G045700 [exp]	14.73	0.8915
AT1G66150		TMK1	transmembrane kinase 1 (.1)		Potri.017G134900 [exp]	14.83	0.8703	TMK1.1
AT5G16490		RIC4	ROP-interactive CRIB motif-con...		Potri.014G147000 [exp]	15.68	0.8916	Pt-RIC2.1
AT1G28240			Protein of unknown function (D...		Potri.011G053000 [exp]	15.96	0.8781
AT1G53035			unknown protein		Potri.001G399900 [exp]	16.43	0.8834
AT1G67730		ATKCR1, YBR159,...	beta-ketoacyl reductase 1 (.1)		Potri.008G181700 [exp]	16.97	0.8772

Compare expression of checked genes

Potri.012G130500 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.