Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	MOM.2,1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G08060 474 / 3e-136 MOM1, MOM MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) AT2G25170 221 / 1e-57 CKH2, SSL2, GYM, CHD3, PKL, CHR6 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1) AT5G44800 205 / 2e-52 PKR1, CHR4, MI-2-LIKE PICKLE RELATED 1, chromatin remodeling 4 (.1) AT4G31900 195 / 6e-50 PKR2 PICKLE RELATED 2, chromatin remodeling factor, putative (.1.2) AT2G13370 180 / 7e-45 CHR5 chromatin remodeling 5 (.1) AT5G19310 124 / 3e-28 Homeotic gene regulator (.1) AT3G06400 121 / 3e-27 CHR11 chromatin-remodeling protein 11 (.1.2.3) AT5G18620 120 / 9e-27 CHR17 chromatin remodeling factor17 (.1.2) AT3G06010 118 / 4e-26 ATCHR12 Homeotic gene regulator (.1) AT5G66750 113 / 8e-25 CHR01, CHA1, SOM1, CHR1, SOM4, DDM1, ATDDM1 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G212700 [exp] 2277 / 0 AT1G08060 464 / 2e-133 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Potri.005G010133 [exp] 1328 / 0 AT1G08060 166 / 5e-41 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Potri.018G021100 [exp] 215 / 9e-56 AT2G25170 1818 / 0.0 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1) Potri.006G262200 [exp] 215 / 9e-56 AT2G25170 1826 / 0.0 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1) Potri.001G123400 [exp] 215 / 2e-55 AT5G44800 1996 / 0.0 PICKLE RELATED 1, chromatin remodeling 4 (.1) Potri.003G110100 [exp] 214 / 4e-55 AT5G44800 1988 / 0.0 PICKLE RELATED 1, chromatin remodeling 4 (.1) Potri.009G047800 [exp] 176 / 2e-43 AT2G13370 2129 / 0.0 chromatin remodeling 5 (.1) Potri.001G253400 [exp] 172 / 2e-42 AT2G13370 2206 / 0.0 chromatin remodeling 5 (.1) Potri.010G021400 [exp] 126 / 1e-28 AT3G06400 1748 / 0.0 chromatin-remodeling protein 11 (.1.2.3)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041322 [exp] 1273 / 0 AT1G08060 440 / 4e-125 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10037390 [exp] 1263 / 0 AT1G08060 455 / 7e-130 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10021457 [exp] 236 / 3e-62 AT1G08060 152 / 8e-37 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10041019 [exp] 229 / 4e-60 AT2G25170 1776 / 0.0 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1) Lus10005339 [exp] 223 / 4e-58 AT2G25170 1787 / 0.0 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1) Lus10016103 [exp] 220 / 4e-57 AT1G08060 150 / 3e-36 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10038363 [exp] 217 / 4e-56 AT5G44800 1916 / 0.0 PICKLE RELATED 1, chromatin remodeling 4 (.1) Lus10036223 [exp] 207 / 5e-53 AT5G44800 1780 / 0.0 PICKLE RELATED 1, chromatin remodeling 4 (.1) Lus10022423 [exp] 181 / 6e-45 AT2G13370 2250 / 0.0 chromatin remodeling 5 (.1) Lus10009711 [exp] 171 / 3e-42 AT2G13370 2115 / 0.0 chromatin remodeling 5 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Potri.013G006000.8 pacid=42810702 polypeptide=Potri.013G006000.8.p locus=Potri.013G006000 ID=Potri.013G006000.8.v4.1 annot-version=v4.1 ATGGGAAATGATACTAAAGCTAGTCGCAAAGCTAAGGCTGAGGAAAGCAAAAACAATGATGTAAAAGGGAGAAACATCGCTAGCAGGTCATCAACTGATA AGTCTGGTCTAAGAAGGTCGGTGAGAGAAGCATCATCAAAGAAAAATGTGACTCCAAGCCCTTCAAGCACTCGGAAGTCTGAACGTCTTGAGAAGCAGAC CCCTACGGCTCCTCCAGCTACGAGGAAATCTGAGAGATTAGTTGAGAAGCAAAGCTTGTCGAGTCCTCTGAGAAGGTCTGAGAGGGGTAAGAATCAATCT TCATCTAGTTCTTCTGGTTCAAAGAAGTCTGGCAAAAAATCAAGCTCTTCAGTTATGAAGAAAAAGCAGAAGAAAGAGAAGAGTGTCAAACAGCTTGAAA CTAAAGATGTTGGAAACGATAAGAAACATGTGATCAAAGCTGTCCTGGTTGAAACAAAGAGAATGGATGCTCGTGCTTACAAGGCATTGTTCAAACGACA ACAAAAGAAAGCTAATCTGGAAGGTCGTTGTGAGGAGATGAAGAACAAGAATGCTGATGGCAATGATTGCAGAGATGGTGCTTCCGAGAATGTTAATGGG GGCAGTGAATGCAGTCAAAGGAAGGTGGAAGAATTGATAGATAGGTGTGTTTTGAGAGATTCTGAGAAAAATTTGGAAGGAAATTCCATTGCAAGTGAAC CTGTAAAAGAGGTGTTGGAAAATAATGGTGGACCAAAACCTCCACTTAAAAGCCAGAAGCTCACATTCTTAGAAAAAGACCATCAATTTAAAGAAGGGGA CAGCAGGGAAGATCTGAATAGTGATGACAGTGTGCTGCTGTCAGCTCAAAGAACTTTATCGGAGCCGGAGAATGATGTTGCTCAAATGGAACAAGAACAA TTGCCAGCAGAGTTGGTAGATTTGACAGTTAATAGGACACCCAGGGTTGATACTGAGGTGGAGAGTGGTTACAAGGAGATGCCTTTTAAACGAAAAAGAA GCATTGAGGACTTGAATTCTGATGCTACAACAATGGTTTCAAATAAAGTTGCCGATGCAGCTCCATATGAGAACGGCAGAACTGATTCCGTGGCGAAGTG CGCTACATCTTCCAAAAGGCAAAGAGGGGGAATTGAAGCCAATGTCACTGCAGGACCTGCAGAACCATGCATCGCGGACTTGCATCTTAAAAAGTCTTCT CTATATTCTCAGCTCGATGGCGACCCAAATACATGTGTCATCTGCAAGCTTGGTGGAAAGCTCTTGTGTTGTGACGGACAAGGTTGTAAAAGAAGCTACC ATCTTTCTTGTCTAGATCCTCCTTTAGGGGATGTTCCCCTTGGAGTTTGGCACTGTCTTGCATGTGTTAGGAAGAAGATCGAGTTTGGTATGCATTCAGT TTCAAAGGGAATAGAGTCAATTTGGGATGCCAGTGAAGTGGAGGTGGCAGATGACAATGGAGTGCAAAGGCAGAAGCAATTTTATGTTAAATACAAAGGT CTTGCTCATGTTCATAATCGCTGGTTGCCGGAGAATCAATTGATCCTTGAAGCTCCTTCACTTCTAGCAAAATTCAACCAAAAAAACCAGGTCAGAAAGT GGAAGCAAGAATGGATTGTGCCACATCACATGCTTCAAAAGCGATCAGTAATGTTTCCCAACCAGCACGTAGAGAATTTCAGTCACCATGCTAGCAATAT TCTAGCATGCCAATTTGAGTGGCTTGTTAAATGGCGTGGCCTGGATTATGAGCATGCAACCTGGGAGTTGGAGATTGCTCCTTTCATGAATTCACCTGAA GCTCAGAGCCTCATACGAGATTATGAAAATCGTCTTGTGAAGGCAAAAGGAGCTGAGTATTTATCTATAATAGATAAGTTGTCAGCTGGAGGTTCACCTG AATTTGATTATAACCATCTGGACTTTGTCAACTATCTTCATGACTACTGGCTCAAGGGAGAGAATGCTGTTCTTATCGATGATCAGGAACAAATCACAAA GGTGATCTCTTTTATTTTGTCATTGTCATCCAATGCCTCTTGGCCTTTTCTCATCATCACAACTTCTGCTTCACTTCATTCATGGGAAGAAGAGTTATTT CGTCTGGCACCATCTCTATATGCTGTGGTTTATCACGGAAACAAAGACATACGGAAAAGTATTAGGAAGTTGGAGTTTTACAGTGAAGGCGGTTGCATTA TGTTTCAAATACTTGTAACATCACCAGAAGTTATTATTGAGGATCTAAATGTGCTTGAATCAATGAAATGGGAAGCTGTAATAGTGGATGAGTGCCAGAG CTCTAGAATATTTTCACATTTTAAACAAATTAAGATGCTAAGGACTGCTATGCGGCTTCTCCTTGTAAATGGTCAGCTTAAGGATGGCATCACTGAGCAC CTGCTGTCTCTGCTTGTTCATCAGAGTGATCTAAATGGCAGTGAAGACTTGGTAACTAATTTAAGCCCTAAGACTGGCAATTTGAAGGACCAGTTGTCAA AATACATTGCAAACAGTCCCAGACCAGACCCCTCAAGGTTTAAAGAATATTGGGTTCCTGTACAGTTATCCCTCATGCAGCTTGAGCAGTATTGTGCCAC TTTACTTTCAAAATCTTTATCACTTTGCTCGTCCTCAAGGAACGATCCTGTTGGTGCCCTCCGCGATATTCTTATCTCTTGTCGCAAGTGTTGCGATCAT CCCTACATCATGAATCCATCACTACAAATTTCATTAACGAAAGACAGAAAAGAAGCTGACATTTTAGATATTGGAATAAAAGCAAGTGGCAAGCTGCAAC TCCTGGGTGAGATGCTTTTCAGCATAAAAGAGAGAGGATTAAGAGCGCTGGTCCTTTTTCAGTCTAGTGGAGGTTCTGGAAAGGATAATATTGGTGATAT ATTGGATGACTTTGTGCGTCAAAGATTTGGCCAGGGTTCTTATGAACGTGTTGATGAGCATGTACTCCCTTCAAGGAAGCAATCTGCTTTGAAGTTCTTC AATAATCATCAGGAAGGGAGGTTTGTGTTCTTATTAGAAACCCGTGCTTGTAGTTCCAGCATCAAACTTTCATCTGTGGATACTGTCATCATATTTGCTA GCGATTGGAACCCGATGACTGATATAAGGAGCCTGCAAAAAATAACATTACATTCACAGTTTGACCAGATAAATATATTTCGTCTATACTCTTCTTGCAC TGTGGAAGAAAAAGTTCTAATCATTGCAAGGCAAGATAAGACACTCGAGAGTAGTTTACACAGTATAAGCCGGGCTGCTAGTGACATGCTGCTTATGTGG GGGGCTTCGTATCTCTTTGAAAAATTATCAGAGTTCCATTGTGGCAATGACACTGCCTCGAGTGGAAATACATTGTTTGAGCAATCACATTTGAAAGATG TTATCCAAGAGTTCTTAACCATAATAATTCAGAAGGGAAAAGATAATACTCCAAGTAACTCAATAATTTTGAAAGTTAAACAAAATCAAGGAATATATAC TACTAATTTTCCATTGCATGGTGAGCGAAAAATTCAATTGTTGGATGAAGAGCTGCCTCATATATTTTGGAAAAAACTGCTTGAGGGAAAACAGCCACGG TGGAAATATAGTTCTGGTTTGTCTCAGAGGAACAGAAAAAGGGTTCAATATGCTGATGATATACAGAAGAATACTGTAGTTGAGGGTGATGAAGTTGTAA AGAAGCGCAATAAAGTGGCCAACAATAGCACTAATTCACCTTCTCTAAAAGCTGCTCTAATAGGAACTTCTGGAGCCCCAGTGCTTAATATGTCTCAATT CCTGCCAAGTTCAACTGGCCGTCTTAACACTACTGCTACAAATCATGTTTCCAACTTCAGACATTCGAATAGTAATTCATCAGAAGTACTAAAAGCTAAT AAGGTTGAGTATAATGAAAGAATGAATTTGCATGATTCCGAGAAGAGTCTCCATCTCATTCTGAAGCCAGAGATAACAAAACTTTGTGAAATTTTGCAAC TCCCAGAAAATGTCAAGGTCATGGTGGAACGATTTCTGGAATATGTGCTGAATAATCACCATATCAGTAGAGAACCAGCTAGCATATTACAGGCATTTCT GATATCCTTGTGTTGGACTTCAGCTTCCATGCTAAAGCACAAACTTGGTCACAAAGAATCACTTGCACTTGCAAAACAGCATCTGAATTTTGGCTGCAAG AAAGATGAGGCAGATTTTGTTTATTCAAAGTTGCGATGTCTGAAGAAAGCATTTCTTCATCATACAGGGACTTATAAGGTGGCCACATCTCCAAAAGCTG CAGAGTTTTCAACTGAAGATCACAGCAAGAATCAGTCAAATGGAAGATCATCACTGTCAACACCATCAAACATGCAAAAGGGGAGAATAGAGGTTGAAAA CCTGAGACCTAGCCAGGAATTCTCCATTGATCAGGTCGTTTCCCATCTAGGATTGGCACAAAAAGATTACTCAAAAAGTATCAAAGATATTGAAAAGAAA TGTGACAAACAGATGAGGAAGCTATTGCAGAGGCAACAAGAAGAAATGGAAGAGTTTGAAAAGAAGTACGAGGAAGAGAAGGCAGAGCTTGAACATATGC ACAGAACAGAGGCAGCTGTTATTCGTTTACACAGTAATATTTTGGAGAGAACAGATAAACTTAAGGTACTGGATAATGTTTATGCAAAAAAGTTTGAAGA TCTTAACTGGCAGATGGATATGCATCTTAATAATCTTTTGGAATTGCAACTGGCTACAAGGAACAAGTTACAAGAGAGGAAGGCTCAATGGATTAAAGGA GTTAAGTCCTGGGCACATGCTGAATTAATAAAGAAACCAACTGCAAATGAGTCTGGATATAATCAAGAAAACTTTGTCACTTGGAATTCTTGTTGCAAAG AACAGACTCCCGAACGATCCCGGAGCATGCCAGATGATGTTCCACTGGAAGTTCCTGAAACTGTGAGTTCGAGTGAGGATGTACTTCCTGGGGTATTAGC TACATCCAAACCGAGCTCTGATGGGGCCACATCCAGCATGCTTGACAGAGAAGTTCCCTTGGAAGTGCCTCAGACTGCAACTGTGAGGGGTGTTTCAGAG GATGTTATGTCTGCGAATTCATTTCCATGTGAAGAACAAATCCCTGATTTACAGGTTACATTGAGAGTACTTGAGGCTAACTGCTCTAGTGATGGTCCTG AGAACACCATTCATAAATCTTCATCTGAAAAAGGTTCTGATAGAGTTACGTTAACAGTGCCTGATAGAGAATTTTCACTGGGGGTGACTGGGATAGTCAC TTCCATTGGTGGCCTGGAGAATGCTGCTTCTGTAAATCCTTCACCATCTGAAGGACAACCTCATGCCAGATCCACTTCATGCATGGATGTCAGAGAAGTT TTATTGGAAGCGCCTGAAACTGCTTCTCTGGAAGCTGAAGAGGATGTTAACAGAATTATGGAGAAAGATGGAGTATCTGGCATGGTATCTGATAATGCCA TTGAAGTTGATCAGTGGAATGGAGTGGTGTGTATTCTTAATCAAGAGCCTCACTATGATGATATGGTGGCAGTCAACCAGCAAACTGGAGAGGTTCGATT AGGAGTGCCTGAAAACAATGTTGTTAACCAGCAGCATGAGGTGGATCCATCAGGAGTTCGTGAAGCGGGGGTTGGCCACAATCAGCTAGAGATTGACAGT ATGCACGTTGTAGCCTCTGATAATGGCCAACCAACTGAATCCTCTAGATTGCAAGATAGAGTTGCACGAGTTTGTAATAACCAGATTGCTTTCCAACAAG TTGATGCTTTGGCATCCCAACCTTTTGTAGCTTCTGATCATTCTCATAGTGACGCGCCTGTCACAGAATTGTTACCATCCATGGACTCCTCTGCTGGTTC ACAGCCTACAACTTCATTTGCAGAACATGCGCCTGCTAATTCAATAGCTGTTGGTGAATCAGGGACGCGTATCTCAAACACGATGACTGCACCTGTCACT TCTATAATTAGTAATTGTCCTGTTACTGCACCCGCTGTTCGAATGCCTGTATCTATGTCTCAAGATCCATTGCAGAATGAATTGGATAGAATATGCAGAG AAACAGAACAAATAATCAAGATCCATGAAGATACAAAGCTGCAGCTGAAATCTGATTGCGAGAAGGAGATACAGGAGGTTGTTGCTCAAATTCGTACAAA GCATGATATTAAACTTCAGGAGATAGAATCTGAATTCCTCCGTAAGAAGAAAGAGATGGCTGACAATCAAAACAAAGTTTTCTTGAACAAGATTTTGGCC GAGGCATTCAGGAGCAAGTGCATGGATAATAAGGCATCTAGCACCCCTGTCAGGCAGCAAGAGATAAACTCTAGTATCGTGCAGCAGCAGCTTCAGCTAT CGGAACCCACTGCTCGGCCTTATATTGTTACTGGCTTGTATTCCACTGCTCTTCCAGCAGCTAGTCTGCAAACAACTCCAACATCTTCCCCTCCTGCCCC ACCACGACAGGTTGTTCATAGCTCAGGACGTTTCTCAAGTACCTCAACCAGACCACCACATATCAGCTCCATCTCTCCTGCCACAAGCAATCTCCGAATC GGTAATGAGATTCGAGCTCCTGCCCCACACCTGCAGCATTTTAGACCTTCAGCACGCGGGATGCAAAGTCAACAAGTATCAACAACTTCTCCCACACCTT CTGAGATTCCTTCACGAGGTCCTGCAACTGCACAACAATCAAGTCCTCAGACGACAACAAATAGTGGTGAAAGCATGGGAATCTCACCTTCTATGACATC TCTCCAGGGACTTGAATCTTTAATGGATATAGATAATCAAACAAGTACAAATGCAACTCAGGCCTGGAGTTCCCCCCCACCAACTGATTTGAGTTCTGAC TCAAACCCATTGGCTCAACCAAAGCTTAGCATGCTAAATAGTGTGCTGACAAACCCAATAAGCGAGGTTGTTTGTTTATCAGATGATGATTGA
AA sequence Show only first row Show all	>Potri.013G006000.8 pacid=42810702 polypeptide=Potri.013G006000.8.p locus=Potri.013G006000 ID=Potri.013G006000.8.v4.1 annot-version=v4.1 MGNDTKASRKAKAEESKNNDVKGRNIASRSSTDKSGLRRSVREASSKKNVTPSPSSTRKSERLEKQTPTAPPATRKSERLVEKQSLSSPLRRSERGKNQS SSSSSGSKKSGKKSSSSVMKKKQKKEKSVKQLETKDVGNDKKHVIKAVLVETKRMDARAYKALFKRQQKKANLEGRCEEMKNKNADGNDCRDGASENVNG GSECSQRKVEELIDRCVLRDSEKNLEGNSIASEPVKEVLENNGGPKPPLKSQKLTFLEKDHQFKEGDSREDLNSDDSVLLSAQRTLSEPENDVAQMEQEQ LPAELVDLTVNRTPRVDTEVESGYKEMPFKRKRSIEDLNSDATTMVSNKVADAAPYENGRTDSVAKCATSSKRQRGGIEANVTAGPAEPCIADLHLKKSS LYSQLDGDPNTCVICKLGGKLLCCDGQGCKRSYHLSCLDPPLGDVPLGVWHCLACVRKKIEFGMHSVSKGIESIWDASEVEVADDNGVQRQKQFYVKYKG LAHVHNRWLPENQLILEAPSLLAKFNQKNQVRKWKQEWIVPHHMLQKRSVMFPNQHVENFSHHASNILACQFEWLVKWRGLDYEHATWELEIAPFMNSPE AQSLIRDYENRLVKAKGAEYLSIIDKLSAGGSPEFDYNHLDFVNYLHDYWLKGENAVLIDDQEQITKVISFILSLSSNASWPFLIITTSASLHSWEEELF RLAPSLYAVVYHGNKDIRKSIRKLEFYSEGGCIMFQILVTSPEVIIEDLNVLESMKWEAVIVDECQSSRIFSHFKQIKMLRTAMRLLLVNGQLKDGITEH LLSLLVHQSDLNGSEDLVTNLSPKTGNLKDQLSKYIANSPRPDPSRFKEYWVPVQLSLMQLEQYCATLLSKSLSLCSSSRNDPVGALRDILISCRKCCDH PYIMNPSLQISLTKDRKEADILDIGIKASGKLQLLGEMLFSIKERGLRALVLFQSSGGSGKDNIGDILDDFVRQRFGQGSYERVDEHVLPSRKQSALKFF NNHQEGRFVFLLETRACSSSIKLSSVDTVIIFASDWNPMTDIRSLQKITLHSQFDQINIFRLYSSCTVEEKVLIIARQDKTLESSLHSISRAASDMLLMW GASYLFEKLSEFHCGNDTASSGNTLFEQSHLKDVIQEFLTIIIQKGKDNTPSNSIILKVKQNQGIYTTNFPLHGERKIQLLDEELPHIFWKKLLEGKQPR WKYSSGLSQRNRKRVQYADDIQKNTVVEGDEVVKKRNKVANNSTNSPSLKAALIGTSGAPVLNMSQFLPSSTGRLNTTATNHVSNFRHSNSNSSEVLKAN KVEYNERMNLHDSEKSLHLILKPEITKLCEILQLPENVKVMVERFLEYVLNNHHISREPASILQAFLISLCWTSASMLKHKLGHKESLALAKQHLNFGCK KDEADFVYSKLRCLKKAFLHHTGTYKVATSPKAAEFSTEDHSKNQSNGRSSLSTPSNMQKGRIEVENLRPSQEFSIDQVVSHLGLAQKDYSKSIKDIEKK CDKQMRKLLQRQQEEMEEFEKKYEEEKAELEHMHRTEAAVIRLHSNILERTDKLKVLDNVYAKKFEDLNWQMDMHLNNLLELQLATRNKLQERKAQWIKG VKSWAHAELIKKPTANESGYNQENFVTWNSCCKEQTPERSRSMPDDVPLEVPETVSSSEDVLPGVLATSKPSSDGATSSMLDREVPLEVPQTATVRGVSE DVMSANSFPCEEQIPDLQVTLRVLEANCSSDGPENTIHKSSSEKGSDRVTLTVPDREFSLGVTGIVTSIGGLENAASVNPSPSEGQPHARSTSCMDVREV LLEAPETASLEAEEDVNRIMEKDGVSGMVSDNAIEVDQWNGVVCILNQEPHYDDMVAVNQQTGEVRLGVPENNVVNQQHEVDPSGVREAGVGHNQLEIDS MHVVASDNGQPTESSRLQDRVARVCNNQIAFQQVDALASQPFVASDHSHSDAPVTELLPSMDSSAGSQPTTSFAEHAPANSIAVGESGTRISNTMTAPVT SIISNCPVTAPAVRMPVSMSQDPLQNELDRICRETEQIIKIHEDTKLQLKSDCEKEIQEVVAQIRTKHDIKLQEIESEFLRKKKEMADNQNKVFLNKILA EAFRSKCMDNKASSTPVRQQEINSSIVQQQLQLSEPTARPYIVTGLYSTALPAASLQTTPTSSPPAPPRQVVHSSGRFSSTSTRPPHISSISPATSNLRI GNEIRAPAPHLQHFRPSARGMQSQQVSTTSPTPSEIPSRGPATAQQSSPQTTTNSGESMGISPSMTSLQGLESLMDIDNQTSTNATQAWSSPPPTDLSSD SNPLAQPKLSMLNSVLTNPISEVVCLSDDD

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G08060		MOM1, MOM	MORPHEUS MOLECULE 1, MORPHEUS ...		Potri.013G006000 [exp]	0	1	MOM.2,1
AT4G00450		CCT, CRP	CRYPTIC PRECOCIOUS, CENTER CIT...		Potri.002G159900 [exp]	1.73	0.9273	Pt-CRP.3
AT5G24350			unknown protein		Potri.015G008500 [exp]	2.00	0.8966
AT5G07980			dentin sialophosphoprotein-rel...		Potri.015G056400 [exp]	2.44	0.9031
AT1G08060		MOM1, MOM	MORPHEUS MOLECULE 1, MORPHEUS ...		Potri.005G010133 [exp]	2.44	0.8922
AT2G01130			DEA(D/H)-box RNA helicase fami...		Potri.010G117800 [exp]	3.87	0.8931
AT1G79350		EMB1135	embryo defective 1135, RING/FY...		Potri.008G081200 [exp]	5.65	0.8689
AT5G44800		PKR1, CHR4, MI-...	PICKLE RELATED 1, chromatin re...		Potri.001G123400 [exp]	5.74	0.8978
AT2G24350			RNA binding (RRM/RBD/RNP motif...		Potri.012G145100 [exp]	6.48	0.8912
AT2G34780		EMB1611, MEE22	EMBRYO DEFECTIVE 1611, materna...		Potri.001G463700 [exp]	6.48	0.8533
AT3G62900			CW-type Zinc Finger (.1)		Potri.005G028700 [exp]	7.41	0.8789

Compare expression of checked genes

Potri.013G006000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.