Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	BZO2.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G28770 233 / 1e-73 bZIP BZO2H3, ATBZIP63 Arabidopsis thaliana basic leucine zipper 63, bZIP transcription factor family protein (.1.2.3) AT4G02640 161 / 7e-45 bZIP BZO2H1, AT4G02640, ATBZIP10 Arabidopsis thaliana basic leucine zipper 10, bZIP transcription factor family protein (.1.2) AT3G54620 155 / 9e-43 bZIP BZO2H4, ATBZIP25 BASIC LEUCINE ZIPPER O2 HOMOLOG 4, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 25, basic leucine zipper 25 (.1.2.3) AT5G24800 92 / 7e-21 bZIP BZO2H2, ATBZIP9 BASIC LEUCINE ZIPPER O2 HOMOLOG 2, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 9, basic leucine zipper 9 (.1) AT3G30530 47 / 5e-06 bZIP ATBZIP42 basic leucine-zipper 42 (.1) AT2G18160 46 / 1e-05 bZIP GBF5, ATBZIP2 G-BOX BINDING FACTOR 5, basic leucine-zipper 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G053200 [exp] 628 / 0 AT5G28770 223 / 1e-69 Arabidopsis thaliana basic leucine zipper 63, bZIP transcription factor family protein (.1.2.3) Potri.005G217500 [exp] 205 / 3e-61 AT3G54620 160 / 2e-44 BASIC LEUCINE ZIPPER O2 HOMOLOG 4, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 25, basic leucine zipper 25 (.1.2.3) Potri.002G045800 [exp] 184 / 8e-53 AT3G54620 123 / 1e-30 BASIC LEUCINE ZIPPER O2 HOMOLOG 4, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 25, basic leucine zipper 25 (.1.2.3) Potri.006G277800 [exp] 87 / 7e-19 AT5G24800 222 / 2e-71 BASIC LEUCINE ZIPPER O2 HOMOLOG 2, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 9, basic leucine zipper 9 (.1) Potri.004G158200 [exp] 46 / 9e-06 AT1G75390 152 / 8e-48 basic leucine-zipper 44 (.1.2) Potri.008G113400 [exp] 46 / 1e-05 AT1G13600 139 / 2e-41 basic leucine-zipper 58 (.1) Potri.002G031900 [exp] 40 / 0.0005 AT1G75390 128 / 3e-38 basic leucine-zipper 44 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006590 [exp] 379 / 5e-129 AT5G28770 260 / 2e-84 Arabidopsis thaliana basic leucine zipper 63, bZIP transcription factor family protein (.1.2.3) Lus10015913 [exp] 363 / 1e-122 AT5G28770 244 / 7e-78 Arabidopsis thaliana basic leucine zipper 63, bZIP transcription factor family protein (.1.2.3) Lus10018759 [exp] 189 / 7e-55 AT3G54620 182 / 1e-52 BASIC LEUCINE ZIPPER O2 HOMOLOG 4, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 25, basic leucine zipper 25 (.1.2.3) Lus10024847 [exp] 170 / 6e-48 AT3G54620 171 / 2e-48 BASIC LEUCINE ZIPPER O2 HOMOLOG 4, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 25, basic leucine zipper 25 (.1.2.3) Lus10024848 [exp] 168 / 8e-46 AT4G02610 421 / 3e-144 Aldolase-type TIM barrel family protein (.1) Lus10026973 [exp] 88 / 4e-19 AT5G24800 191 / 6e-59 BASIC LEUCINE ZIPPER O2 HOMOLOG 2, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 9, basic leucine zipper 9 (.1) Lus10020170 [exp] 76 / 3e-15 AT5G24800 148 / 3e-43 BASIC LEUCINE ZIPPER O2 HOMOLOG 2, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 9, basic leucine zipper 9 (.1) Lus10029101 [exp] 48 / 6e-06 AT3G30530 148 / 5e-45 basic leucine-zipper 42 (.1) Lus10013059 [exp] 46 / 2e-05 AT3G30530 147 / 8e-45 basic leucine-zipper 42 (.1) Lus10024279 [exp] 42 / 0.0003 AT1G75390 166 / 6e-53 basic leucine-zipper 44 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0018 [poplar] [flax] bZIP PF00170 [poplar] [flax] bZIP_1 bZIP transcription factor CL0018 [poplar] [flax] PF12498 [poplar] [flax] bZIP_C Basic leucine-zipper C terminal
Representative CDS sequence Show only first row Show all	>Potri.013G040700.1 pacid=42812220 polypeptide=Potri.013G040700.1.p locus=Potri.013G040700 ID=Potri.013G040700.1.v4.1 annot-version=v4.1 ATGGAGAGGGTATTTTCAGTGGAGGATAACATTACTGAGCTTTTTTGGTCACCACCACCACCACCACCTGATGACTTGTCCAAAATGAACCGGTCTGAGT CTGAATGGGCTTTCGAAAGATTCCTTCAAGAAGCCTCTGCTGTAACCCTTGATGACAACACTTCTTCTAATTCTTCTGCTGATAAAACTGACGTTGTTCA AATCAAAGATCATGGTAATAGTAATAACAACGCTACAAGTAAGTGTTCCTTTAGTAATGGGACCTGTGCCACTGCTGCTTCCTCCTTTGCTGCTCCGGCG ATTATTCCGGTGGAATCTGACGATTATCATGCGTTTTTGAAGAGTAAACTCAATTTGGCTTGTGCTGCTGTTGCTTTGACTCGGGCATCTTTTGTAAAGC CTCTAGATTCTCCTGCCGCAGCTGAAAGTGGATCACAGGCTTCAAATACTTCACAATTGGGATCACATGCTCCTTCTAAAGGAGCTGGATATGATTTACC GATATCCCAAGATAAAGATGCTAATGAGCCTCTTGGAACTCCCTCCTTACCTTCCATGCAAAGGAAATCTGCAGTTACTGTGAAGCCAACAACTAGTGTA TCATCCAGAGAACTGTCAGAGGATGATGAAAATGAAGCAGAAACTGAATTAACTGAAAATATGCAACCTGCTGATGCAAAGCGTGTAAGGAGAATGCTTT CAAATAGAGAGTCAGCTCGGCGATCAAGAAGTAGAAAGCAGGCCCATTTGACTGAGCTTGAGACACAGGTTGCTCAATTGAGGGTTGAAAATTCATCTCT ACTGAAGAGCCTCACTGACATAAGTCAGAAGTACAATGAGTCAGCTGTTGACAACAGAGTTTTAAAAGCTGATGTTGAAACACTGAGAGCGAAGGTGAAG ATGGCTGAAGAGACAGTCAAAAGATTTACTGGGTTGAACACTATGTTCCATGCCTTGCCTGATATATCCACAATGAGTATGTCATCATTTGATGGAAGCC CCTCTGACACTGCAGATGCTGCTGTTCCTGTAAAGGATGACCCAAAGCATCACTTTTATAAAGCTCCAAACAATCCTATAACAACTCATGACTCCAGGCC CAGAGGCAATAATGTGTTGGCAGATATATCTTCAGTTGAAAATGTGCAGCCAAATCCTGTACCAGCAGCAGGAGTATCAGGGAACAAGATGGGGCGAACA CCTTCCTTGCAGCGAGTAGCTAGCTTGGAGCATTTGCAGAAACGGATTCGTGGGGGTGCAAGTCCTTGCGGGCCCCAGTCCAATGGGGAGCAGGCAAAAT GA
AA sequence Show only first row Show all	>Potri.013G040700.1 pacid=42812220 polypeptide=Potri.013G040700.1.p locus=Potri.013G040700 ID=Potri.013G040700.1.v4.1 annot-version=v4.1 MERVFSVEDNITELFWSPPPPPPDDLSKMNRSESEWAFERFLQEASAVTLDDNTSSNSSADKTDVVQIKDHGNSNNNATSKCSFSNGTCATAASSFAAPA IIPVESDDYHAFLKSKLNLACAAVALTRASFVKPLDSPAAAESGSQASNTSQLGSHAPSKGAGYDLPISQDKDANEPLGTPSLPSMQRKSAVTVKPTTSV SSRELSEDDENEAETELTENMQPADAKRVRRMLSNRESARRSRSRKQAHLTELETQVAQLRVENSSLLKSLTDISQKYNESAVDNRVLKADVETLRAKVK MAEETVKRFTGLNTMFHALPDISTMSMSSFDGSPSDTADAAVPVKDDPKHHFYKAPNNPITTHDSRPRGNNVLADISSVENVQPNPVPAAGVSGNKMGRT PSLQRVASLEHLQKRIRGGASPCGPQSNGEQAK

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G28770	bZIP	BZO2H3, ATBZIP6...	Arabidopsis thaliana basic leu...		Potri.013G040700 [exp]	0	1	BZO2.2
AT4G16130		ATISA1, ARA1	arabinose kinase (.1)		Potri.018G003100 [exp]	3.00	0.7721
AT4G09760			Protein kinase superfamily pro...		Potri.002G063700 [exp]	3.00	0.7964
AT5G47240		ATNUDT8	nudix hydrolase homolog 8 (.1)		Potri.001G154300 [exp]	5.65	0.7471
AT5G22920			CHY-type/CTCHY-type/RING-type ...		Potri.009G005700 [exp]	7.14	0.7577
AT4G36800		RCE1	RUB1 conjugating enzyme 1 (.1....		Potri.009G113045 [exp]	12.80	0.7961
					Potri.005G053150 [exp]	20.07	0.7600
AT4G35780		STY17	serine/threonine/tyrosine kina...		Potri.004G179100 [exp]	25.49	0.7957
AT1G30540			Actin-like ATPase superfamily ...		Potri.011G164500 [exp]	33.57	0.7191
AT5G21170		AKINBETA1	5'-AMP-activated protein kinas...		Potri.001G220800 [exp]	70.58	0.7286
AT3G25400			unknown protein		Potri.008G168700 [exp]	101.50	0.7075

Compare expression of checked genes

Potri.013G040700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.