Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	SAT.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G56760 419 / 9e-149 SAT-52, AtSerat1;1, SAT5 SERINE ACETYLTRANSFERASE 52, serine acetyltransferase 1;1 (.1) AT1G55920 318 / 8e-109 SAT5, SAT1, AtSerat2;1 SERINE ACETYLTRANSFERASE 5, SERINE ACETYLTRANSFERASE 1, serine acetyltransferase 2;1 (.1) AT3G13110 318 / 6e-108 SAT-M, SAT-A, SAT3, SAT-1, AtSerat2;2 SERINE ACETYLTRANSFERASE 3, SERINE ACETYLTRANSFERASE-MITOCHONDRIAL, SERINE ACETYLTRANSFERASE A, SERINE ACETYLTRANSFERASE-1, serine acetyltransferase 2;2 (.1) AT4G35640 253 / 1e-82 ATSERAT3;2 serine acetyltransferase 3;2 (.1) AT2G17640 241 / 1e-78 SAT-106, AtSerat3;1 SERINE ACETYLTRANSFERASE 106, Trimeric LpxA-like enzymes superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G147000 [exp] 484 / 8e-175 AT5G56760 420 / 5e-149 SERINE ACETYLTRANSFERASE 52, serine acetyltransferase 1;1 (.1) Potri.001G365500 [exp] 333 / 2e-114 AT3G13110 402 / 3e-140 SERINE ACETYLTRANSFERASE 3, SERINE ACETYLTRANSFERASE-MITOCHONDRIAL, SERINE ACETYLTRANSFERASE A, SERINE ACETYLTRANSFERASE-1, serine acetyltransferase 2;2 (.1) Potri.005G099700 [exp] 122 / 1e-33 AT4G35640 280 / 2e-94 serine acetyltransferase 3;2 (.1) Potri.011G068001 [exp] 110 / 7e-30 AT2G17640 134 / 6e-39 SERINE ACETYLTRANSFERASE 106, Trimeric LpxA-like enzymes superfamily protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032686 [exp] 434 / 1e-154 AT5G56760 481 / 2e-173 SERINE ACETYLTRANSFERASE 52, serine acetyltransferase 1;1 (.1) Lus10008567 [exp] 432 / 3e-154 AT5G56760 482 / 2e-173 SERINE ACETYLTRANSFERASE 52, serine acetyltransferase 1;1 (.1) Lus10016603 [exp] 311 / 4e-106 AT3G13110 430 / 2e-151 SERINE ACETYLTRANSFERASE 3, SERINE ACETYLTRANSFERASE-MITOCHONDRIAL, SERINE ACETYLTRANSFERASE A, SERINE ACETYLTRANSFERASE-1, serine acetyltransferase 2;2 (.1) Lus10040503 [exp] 308 / 5e-105 AT3G13110 434 / 4e-153 SERINE ACETYLTRANSFERASE 3, SERINE ACETYLTRANSFERASE-MITOCHONDRIAL, SERINE ACETYLTRANSFERASE A, SERINE ACETYLTRANSFERASE-1, serine acetyltransferase 2;2 (.1) Lus10010679 [exp] 249 / 2e-81 AT4G35640 448 / 6e-159 serine acetyltransferase 3;2 (.1) Lus10007424 [exp] 142 / 1e-39 AT4G35640 294 / 4e-98 serine acetyltransferase 3;2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0536 [poplar] [flax] HEXAPEP PF00132 [poplar] [flax] Hexapep Bacterial transferase hexapeptide (six repeats) CL0536 [poplar] [flax] PF06426 [poplar] [flax] SATase_N Serine acetyltransferase, N-terminal
Representative CDS sequence Show only first row Show all	>Potri.013G109500.1 pacid=42812463 polypeptide=Potri.013G109500.1.p locus=Potri.013G109500 ID=Potri.013G109500.1.v4.1 annot-version=v4.1 ATGCCGCCGGAAGGGGAGCTCCGATACCCATCACCGCCACTAACAGATTCCACCACCACAATAGACGACGAGGCGGGCTGGGTGTGGGCCCAGATAAAAG CGGAAGCGAGGCGCGACGCCGAGTCAGAGCCAGCTTTGGCAAGCTACCTATATTCGACAATTCTGTCTCACTCATCATTAGAGAGGTCGCTCTCCTTTCA TTTAGGAAACAAGCTCTGCTCTTCAACGCTTCTCTCAACTCTCTTGTACGATCTCTTCCTCAACACTTTCACTTCAGACCCTGGTCTTCGCGTCGCTGCT GTTGCTGACCTTCGAGCCGCACGTGCTCGTGACCCTGCTTGCGTTTCTTTCTCTCACTGCCTCCTCAATTACAAAGGTTTCTTGGCCTGCCAGGCTCATC GAGTTGCTCACAAGTTGTGGAATCAGTCTCGTAGGCCACTGGCGTTGGCTTTACACTCTCGAATCTCTGATGTTTTTGCCGTTGATATACACCCAGCAGC CAAGATTGGCAAGGGTATACTTTTTGATCATGCAACTGGTGTGGTGATTGGTGAAACAGCAGTGATTGGTAATAATGTCTCCATTTTGCATCATGTTACA CTTGGAGGAACAGGGAAAGCCTCTGGGGATCGCCACCCCAAGATTGGTGACGGAGTGTTGATTGGAGCAGGTGCCACCATTTTGGGGAATGTAAAGATTG GGGAAGGAGCAAAGATTGGAGCAGGCTCAGTAGTGCTAATTGATGTGCCCCCTCGAACCACTACAGTTGGAAATCCTGCAAGGTTAGTGGGAGGGAAGGA AAAACCAGCTAAGCTTGAGGAATGCCCTGGAGAGTCCATGGATCAAACTTCATTTATCTCTGACTGGTCAGATTATATTATTTGA
AA sequence Show only first row Show all	>Potri.013G109500.1 pacid=42812463 polypeptide=Potri.013G109500.1.p locus=Potri.013G109500 ID=Potri.013G109500.1.v4.1 annot-version=v4.1 MPPEGELRYPSPPLTDSTTTIDDEAGWVWAQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNTFTSDPGLRVAA VADLRAARARDPACVSFSHCLLNYKGFLACQAHRVAHKLWNQSRRPLALALHSRISDVFAVDIHPAAKIGKGILFDHATGVVIGETAVIGNNVSILHHVT LGGTGKASGDRHPKIGDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTTVGNPARLVGGKEKPAKLEECPGESMDQTSFISDWSDYII

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G56760		SAT-52, AtSerat...	SERINE ACETYLTRANSFERASE 52, s...		Potri.013G109500 [exp]	0	1	SAT.2
AT1G79810		PEX2, TED3, ATP...	ARABIDOPSIS PEROXIN 2, Pex2/Pe...		Potri.003G051500 [exp]	1.00	0.9225	TED3.1
AT5G14500			aldose 1-epimerase family prot...		Potri.001G344100 [exp]	3.16	0.8930
					Potri.006G029500 [exp]	3.16	0.9184
AT1G78290		SRK2C, SNRK2-8,...	SNF1-RELATED PROTEIN KINASE 2C...		Potri.005G162500 [exp]	4.89	0.9087
AT1G29800			RING/FYVE/PHD-type zinc finger...		Potri.011G106700 [exp]	9.48	0.8760
AT4G16520		ATG8F	autophagy 8f, Ubiquitin-like s...		Potri.008G136040 [exp]	9.64	0.8648
AT1G03430		AHP5	histidine-containing phosphotr...		Potri.016G113500 [exp]	11.74	0.8910	HPT3.1
AT4G32940		GAMMAVPE, GAMMA...	gamma vacuolar processing enzy...		Potri.006G232900 [exp]	14.00	0.8677	Pt-GAMMA-VPE.2
AT3G17650		YSL5, PDE321	pigment defective 321, YELLOW ...		Potri.017G151600 [exp]	14.00	0.8970
AT1G68140			Protein of unknown function (D...		Potri.001G208800 [exp]	16.52	0.8838

Compare expression of checked genes

Potri.013G109500 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.