Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-FUT1.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G71990 576 / 0 ATFT4, ATFUT13, FUCTC, FT4-M, FUT13 ARABIDOPSIS FUCOSYLTRANSFERASE 4, fucosyltransferase 13 (.1) AT3G19280 78 / 2e-15 FUCTA, FUCT1, ATFUT11, FUT11 fucosyltransferase 11 (.1) AT1G49710 70 / 7e-13 ATFUT12, FUCTB, FUCT2, FUT12 fucosyltransferase 12 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.019G082200 [exp] 738 / 0 AT1G71990 587 / 0.0 ARABIDOPSIS FUCOSYLTRANSFERASE 4, fucosyltransferase 13 (.1) Potri.009G101500 [exp] 74 / 5e-14 AT3G19280 701 / 0.0 fucosyltransferase 11 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006076 [exp] 584 / 0 AT1G71990 607 / 0.0 ARABIDOPSIS FUCOSYLTRANSFERASE 4, fucosyltransferase 13 (.1) Lus10009440 [exp] 582 / 0 AT1G71990 603 / 0.0 ARABIDOPSIS FUCOSYLTRANSFERASE 4, fucosyltransferase 13 (.1) Lus10019855 [exp] 74 / 7e-14 AT1G49710 650 / 0.0 fucosyltransferase 12 (.1) Lus10027899 [exp] 71 / 8e-13 AT3G19280 580 / 0.0 fucosyltransferase 11 (.1) Lus10002401 [exp] 67 / 7e-12 AT1G49710 607 / 0.0 fucosyltransferase 12 (.1) Lus10014060 [exp] 64 / 1e-10 AT1G49710 642 / 0.0 fucosyltransferase 12 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [poplar] [flax] GT-B PF00852 [poplar] [flax] Glyco_transf_10 Glycosyltransferase family 10 (fucosyltransferase) C-term
Representative CDS sequence Show only first row Show all	>Potri.013G111200.1 pacid=42811805 polypeptide=Potri.013G111200.1.p locus=Potri.013G111200 ID=Potri.013G111200.1.v4.1 annot-version=v4.1 ATGCAATTAAAACCCCTTAGCACTTACACAATCACACTCATGCTGTTCTTTACAGTCATAATCCTTTTCTTTTCTGGTTTCCTTGAATTTCCATCCATTA CAACCTCGATTACCTCTTCTATTAAAGACTCAAACTTTCCTATCAAAACAGCACCAGATCCTTTCACTGACTTGTTCATTGCTTTCAAGAAATGGGATTC TCAAGTGGGTTGTGTTCAGTTTAGAGAGAAATATAAGAATTTGGACTCTTTTGGGTCTAAGGGGTCAAATGGGTCTGTTTCTGTGCAGGTTGTTAATGGT GATGTGGGGTGTAGTGAGTTGAAGATGCAGCATGTCAGTGTTTTGGTTAAAGGGTGGACTTGGATTCCTAGCAATTTGGACAATATGTATTCTTGTCGTT GTGGGTTGAGTTGTTTGTGGACTAAGTCTTCTGTTCTTGCTGACAAGCCTGATGCTTTGTTGTTTGAAACAGCTCCTCCTCCACTTCAGAGGCGCAATGG TGATCCACTTCGTGTCTATATGGATCTTGAGGCTGGCAGGAAACGTTCAGGTCATGAGGATTTATTTATTAGCTATCATGCGGAAGATGATGTTCAGTCA ACATATGCTGGTGCACTCTTTCATAATGGTCGAAATTATCACGTGTCTCGTCGTAAGGACAAAGATACACTAGTTTATTGGTCTTCATCACGCTGCCTTG CTGATAGAAACCAGCTGGCTAAGAGTCTCCTCAGCTTGCTGCCTCACCATTCCTTTGGCAAGTGCTTGAACAATGTTGGCGGGCTAGACATGGCCCTTTC TTTCTATCCTGAGTGTGCCAATGATGCCAGTGTCAAACCAAAATGGTGGGATCATCTACATTGTGCCATGTCTCATTATAAATTTGTCCTTGCCATTGAA AACACCTGGACAGAGAGTTACGTGACAGAAAAGCTATTTTATGCTTTAGATTCCGGTGCAGTTCCAATATATTTTGGTGCACCCAATGTTTTGGACTTCA TTCCTCCACATTCAATAATAGATGGGACCAAATTTAGCTCCAAGGAGGAATTGGCTTCTTATCTCAAGAACCTTGCTAATGACCCTGTAGCCTATGCTGA ATACCATGCATGGAGAAGATGTGGTGTTTTGGGTAATTATGGGAAGACCCGTGCTGCAAGCCTTGACACGTTGCCTTGCCGATTGTGCGAGGCTGTCAGC AGGAAAGGAGGGAGAGATGCTAGAGCTTAG
AA sequence Show only first row Show all	>Potri.013G111200.1 pacid=42811805 polypeptide=Potri.013G111200.1.p locus=Potri.013G111200 ID=Potri.013G111200.1.v4.1 annot-version=v4.1 MQLKPLSTYTITLMLFFTVIILFFSGFLEFPSITTSITSSIKDSNFPIKTAPDPFTDLFIAFKKWDSQVGCVQFREKYKNLDSFGSKGSNGSVSVQVVNG DVGCSELKMQHVSVLVKGWTWIPSNLDNMYSCRCGLSCLWTKSSVLADKPDALLFETAPPPLQRRNGDPLRVYMDLEAGRKRSGHEDLFISYHAEDDVQS TYAGALFHNGRNYHVSRRKDKDTLVYWSSSRCLADRNQLAKSLLSLLPHHSFGKCLNNVGGLDMALSFYPECANDASVKPKWWDHLHCAMSHYKFVLAIE NTWTESYVTEKLFYALDSGAVPIYFGAPNVLDFIPPHSIIDGTKFSSKEELASYLKNLANDPVAYAEYHAWRRCGVLGNYGKTRAASLDTLPCRLCEAVS RKGGRDARA

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G71990		ATFT4, ATFUT13,...	ARABIDOPSIS FUCOSYLTRANSFERASE...		Potri.013G111200 [exp]	0	1	Pt-FUT1.2
AT3G05100			S-adenosyl-L-methionine-depend...		Potri.005G046300 [exp]	2.00	0.7868
AT3G19508			unknown protein		Potri.009G094200 [exp]	6.24	0.7782
AT3G14410			Nucleotide/sugar transporter f...		Potri.001G394500 [exp]	9.79	0.7962
AT2G44660			ALG6, ALG8 glycosyltransferase...		Potri.014G053200 [exp]	14.00	0.7758
AT5G16060			Cytochrome c oxidase biogenesi...		Potri.017G113401 [exp]	14.96	0.7597
AT3G17465		RPL3P	ribosomal protein L3 plastid (...		Potri.008G207000 [exp]	23.34	0.7704	RPL3.2
AT3G14860			NHL domain-containing protein ...		Potri.011G107800 [exp]	29.69	0.7675
AT1G20890			unknown protein		Potri.006G234800 [exp]	39.33	0.7283
AT5G47630		MTACP3	mitochondrial acyl carrier pro...		Potri.016G006300 [exp]	39.97	0.7052
AT5G53480			ARM repeat superfamily protein...		Potri.015G010400 [exp]	43.35	0.6413

Compare expression of checked genes

Potri.013G111200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.