Potri.013G116400 [POPLAR]

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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.013G116400.2 pacid=42812649 polypeptide=Potri.013G116400.2.p locus=Potri.013G116400 ID=Potri.013G116400.2.v4.1 annot-version=v4.1
ATGTGTAGCATGTGTCATTATTGTGGTGCTGATCAGGCAAAGTTGAAGGATGAAAAGCAGAAACTAGAGAATGGAGATTCTTTAAAACTAAATGGTGAAG
AGCCCATTTGGTCTTGCCAATTTTGTCAGGAAAAGCAGGAACCGGAATTGATGAACCATGATGGTTTGAGTCATTCTGTGTCACCAATGATCAGTCCATC
AACTTCGTTGTCTATCAGTGATAGATCTATCTCAAGCTGCAGTGATCTTTCTGTGGATGTAAACTCGCATGACCGGGCTCATCAAGAGGAAGGAACGGTA
CACAGTGCCCAAAAGGATCTAGGTTACGGGGTGAATGACCAACAACACAACACAAGATTGGAAGCTCCTGTAAATAGAGTGGATGGATTACATAAAGTGA
CAGGGAAGGATAGCCATAATGGCAGTGATAGAGACACAGTGAGAGATGTAGAAATTGTGGAACTTGTTAACGATCAAGAATCAGAAGGTAACTCTTCTGC
GAACAGTGTTGGATTTTCAAATGAAGGAAATGATATTTCTCAAATCAGTGACGACGAAGTAGATGCACGGGTTTGGGAGCCTCCTGAAGCAGAAGATCCA
GAGGATGATTTGGACGGTGGTGTGGCTTTTATTGATGACGATGAGGAGTGTGGCGATGGCACAAAATGGGGTAAACCAAGTTCTTTGAGTTGCTGGAGGG
GTGAAGGCAGTCAGAGCTTCAAGTTCAAAGAAGAAAAACAGAAGGCAATGGAAGAAGTGGTTAATGGGAAATTCAAGGCCATCGTGAGTCAACTTCTTAA
AACAGCAGGTGTTGCCTGTGTGGTGAGAGATGGTGAAAGTTGGGTGGATATTGTTACATCTTTATCATGGGAAGCTGCTTCATTTTTGAAGCCTGAAGCA
GTGGATGGGAAAGCAATGGATCTAGATGGTTATGTGAAAGTAAAATGCATTGCAACTGGTTCTCGTAGTGAAAGTCAAGTTGTGGAAGGCTTGGTCTTTA
AAAAACATGCTGCTCACAAGCACATGCCCACTAAGTACAAGAACCCAAGGTTGTTACTGATCCGAGGTGTGCTTGGTCACTCTTCGAGTGTATTGTCATC
ATTTAAATCAATGGAGCAGGAAAAGGATAATCTGAAGTCTCTCGTTGAGACCATAGAAATGTGCCATCCAAATGTAGTTTTAGTAGAAAAATCTGTTTCT
CGTGATGTCCAAGAGTCCATCCTAGCTAAAGGAATCACATTGATCTACGACGTGAAGCTCCATCGTCTAAAAAGGATCGCACGCTGTACTGGTTCACCGA
TTTTATCATCTGATGCTTTGATTAGTCAGAAGTTAAAGCATTGTGACTCCTTTCATATCGAGAGATTTGTGGAGGAACATGCAGGGGTAGGCGAAGGAGG
AAAGAAGCCAAGTAAGACATTGATGTTCATTGAGGGCTGTCCGACACATTTGGGTTGTACAATTTTGTTGAAAGGAAGTCACAGTGATGAGTTGAAGAGG
GTTAAATATGTGACCCAGTTTGCAGTAGTAATTGCATATCACTTGATTCTGGAGACTTCGTTTCTTGTTGATTGGAAGACAATGTTTTCTTCAGCAGTAT
TTGCTGGAGTAGCCAGCAACTCATCAAGAGATCTGCAGTCTTCTGTTTTAGGAACTAGTATTCCTAGTATTGAGGAGTCTACAACTGAAACTGGTTCATC
TACCATTGATATTCCCATTTGTAATGGATTTCATGAAGAAGGTTTCCACAATATAAATATAGGATTAGAGGGATATAATCCTGCCATTCTTTCTGGATTT
TCCTCCCTTTCAGCCTCTCTGAAGAAAGTTGCTGGGGACAGCTTACCTCTTGTCTCCTCTTCTCCTCATCAGTCTTTATCTAATTACGTTGGCTTCAATG
GAAAAGAAATTAATGGTCAAATCTCGGAAGAGGTTCCAGTTTTAAAAACTGTGGAAGCTTCTGACCTCTATGATATGGAAGGTAAAAAAGGTTCTGACAA
AGAGAAGACAGTTGATGATGGATATCCTCAATCTTTGTCTCCTTGCTCCGAAGCCTCTCTGGACAGAGTAAAAGATGTCAACTATAATGAAGATCAAATC
CAAAGTGAGGGTGATGTCAATGCAGTGTTGGATTCTCAGAGTATTTTGGTTTTGATGTCAAGACGGAATGCCTTAAGAGGGACTGTATGTGAGCAAAGCC
ATTTTTCTCATATAATGTTCTACAAGAATTTTGATGTTCCCCTCGGAAAGTTTCTTCGGGATAATTTACTCAATCAGAGAAGCCAGTGCAACACTTGCGG
TGAATTGCCGGAAGCACACTTTTACTATTATGCTCATCATAATAAGCAGCTTACCATACAAGTTAAAAGGCTTCTGAAGATTTTGCCTGGAGAAGCAGAA
GGAAAACTTTGGATGTGGATTCGCTGTGGTAAATGTAAACATGAAAGCAAATTCCCAAAATCTACTAAACGAGTCTTGATTTCAACTGCTGCATGTAGCC
TTTCCTTGGGAAAATTCTTGGAGCTGAGCTTTTCCCACCAATTTTCATCTGGAATTTTATTTAGCTGTGGCCATTCACTGGAGAGAGACTTCCTCTACTT
CTTTGGACTGGGTCCTTTGGCAGCAATGTTTAAATACTCTCCAGTGACAACCTATACTTTGTCTCTCCCACCTCAGAAGCTGGAGTTCCATACAATCAGG
CCTGATGGCCCCAAGCAAGAATTTCATGATGTTTATGTAAGAGGGATGTTACTCTTCAATGGGGTTGGTGAGACTTTGAAGAATTTAAGATCTCGATTTG
CAGGGTCAGTTCTGAATCTTCAAGGTTCATTGAAAGAATTCTCTGATATTGAAGATATGTTGAAGCAGGAGAGTTCTGAGTTCGAGAAAGCTGTTGTTAA
AAATAGGGATGAGGCTGTTTATAAGCTTCTTAGCTTGAATCAATTATTGTGGGAGCTTCTTCTTGAATCATGCATCTGGGAAAGACGTCTGCAGTCATTG
CTCTCACCTGATCCTTCAGTGCTAGTGACTGGTGCCAGTGAGAAAGAAGTGCAGGACCGGTTTGAGTCACAGATGACTGGCACTGCTGATGGAAGAAACC
ATGGGAATGATACTAGCAGTGATAAAGTTTATGAAAACAGTGGCAAATTGAGGGATACACTCAGTACAACTGTTAGAGCAAGTGAATTTTCAATAAAAGA
AATTCCAGTTGATGGTCACGATCATGAATCTAGGGAACATGATAATCTTTACACCTCACCTACCGTGGCTGAGGATATTGAGAGGTCAAGAGTGAGTAGT
CTGAGCCAGAACAGGTTTTTCAACCAAGAACTATTTGTGAAACCTAGTGACTCTGCCCACCAGCATTCTGATGATGGAAATTGCCAAGCAGACTATTTTT
CTGATATACAAGTTGAAAGAACCATTCCAATTGTGACTAGTATAGGGATGAGTGATTCTTTTGTTGATTCTGATTCATCTAAAAAGGGTACGTCTGCACG
TTCTCTAGCATTCAGCTTAGAGAACTCAAATGGATGGTTCTGGATGCCATTTTCAGAAATCCGACGGATCTACATGAAGGATCTTCAGAGAGGTTTCATG
CCAAAATTTCAGCCGATCAGTAGCTATATTCAGGAACACGTATCTGCAGCTTATCAGCTAATCATGGAGGAAGGACAGAGGCTGCACATCCCTGTTGGAA
CTGATAATTATATGGTGAGAGACTACGATGGTGAACTCTCTAGCATAATTGCTTGTGCACTGGCATTTTTAGAAGATCAACCTGTTTCAACAGAGCTTTA
CAACGAGGATGGTAGGAAAGAGGGTGGCATGTCTTTTAAATCAACTGATAGTTTAGACATACTGACTCGAATTCCTACAATGATCTCCCCACGTTGGTCT
TCTAACGGTTCTGATTCAGATTCTGTTCATTCTAAACTAAATATTTCTTTGGAAGAGTCACACTTGTCCAGCTTTGATGGGTTAAATTTATTGGAAGCTG
TGGTTCCTCCAGCAAATCTCAGCCCTGAAGTCTCTCTTGCGGTATCAAAATCATTTGGAAAGGGTAAATACTCTGTAATTTGTCTATACGCTAAGCAGTT
CCGTGATCTTCGGAATCGATGTTGTCCATCTGAACTTGATTATATAGCTTCCCTCAGTCGTTGTAAGAAATGGGATGCAAAAGGTGGAAAGAGCAATTCC
TTTTTTGCAAAGACACTGGATGACAGATTTATCATAAAGGAAATTAAGAGGACAGAATTTGAGTCATTTGTGAAGTTTGCTCCACATTATTTCAAATACA
TGAACGAGTCATTTGAGTTAGGAAACCAAACTTGTCTTGCAAAAGTTCTGGGGATTTATCAGGTGATCACTAGACAAACCAAAAGTGGGAAAGAGATAAA
GCATGATCTGATGGTCATGGAGAATCTTACCTTTGGTCGAAACATCACTCGCCAGTATGATCTTAAGGGAGCTTTACATGCTAGATACAATTCAGCTGCT
GATGGTGCAGGAGATGTTCTTTTGGATAAAAACTTTGTTGACGACATGAATTCCTCTCCACTATACGTCAGTAATACATCAAAGTATCTCTTGGAACGTG
CTGTTTGGAATGACACCACCTTTCTTAATTCAATTAATGTTATGGATTATTCTTTACTTGTGGGAGTAGACACCCAGCGACGAGAACTTGTGTGTGGGAT
TATTGATTATCTCAGGCAGTATACCTGGGACAAGCAGCTGGAAACATGGGTGAAGTCTTCCCTTGTTGTTCCTAAAAATGTGTTGCCAACTGTAATATCT
CCTATAGAGTACAAGAAGAGGTTCAGAAAGTTCATGACTGTGCACTTCTTGAGTGTTCCCGATAACTGGTGCTCACAGAGTTCCTCTAACCCTTGTGAAC
TCTGTGGCGCTGGAGAAGATGGTTCATCACAATCCAAGTCCCAAAAACAAGGGCAAAATGGGCATACTCATTAG
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AA sequence
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>Potri.013G116400.2 pacid=42812649 polypeptide=Potri.013G116400.2.p locus=Potri.013G116400 ID=Potri.013G116400.2.v4.1 annot-version=v4.1
MCSMCHYCGADQAKLKDEKQKLENGDSLKLNGEEPIWSCQFCQEKQEPELMNHDGLSHSVSPMISPSTSLSISDRSISSCSDLSVDVNSHDRAHQEEGTV
HSAQKDLGYGVNDQQHNTRLEAPVNRVDGLHKVTGKDSHNGSDRDTVRDVEIVELVNDQESEGNSSANSVGFSNEGNDISQISDDEVDARVWEPPEAEDP
EDDLDGGVAFIDDDEECGDGTKWGKPSSLSCWRGEGSQSFKFKEEKQKAMEEVVNGKFKAIVSQLLKTAGVACVVRDGESWVDIVTSLSWEAASFLKPEA
VDGKAMDLDGYVKVKCIATGSRSESQVVEGLVFKKHAAHKHMPTKYKNPRLLLIRGVLGHSSSVLSSFKSMEQEKDNLKSLVETIEMCHPNVVLVEKSVS
RDVQESILAKGITLIYDVKLHRLKRIARCTGSPILSSDALISQKLKHCDSFHIERFVEEHAGVGEGGKKPSKTLMFIEGCPTHLGCTILLKGSHSDELKR
VKYVTQFAVVIAYHLILETSFLVDWKTMFSSAVFAGVASNSSRDLQSSVLGTSIPSIEESTTETGSSTIDIPICNGFHEEGFHNINIGLEGYNPAILSGF
SSLSASLKKVAGDSLPLVSSSPHQSLSNYVGFNGKEINGQISEEVPVLKTVEASDLYDMEGKKGSDKEKTVDDGYPQSLSPCSEASLDRVKDVNYNEDQI
QSEGDVNAVLDSQSILVLMSRRNALRGTVCEQSHFSHIMFYKNFDVPLGKFLRDNLLNQRSQCNTCGELPEAHFYYYAHHNKQLTIQVKRLLKILPGEAE
GKLWMWIRCGKCKHESKFPKSTKRVLISTAACSLSLGKFLELSFSHQFSSGILFSCGHSLERDFLYFFGLGPLAAMFKYSPVTTYTLSLPPQKLEFHTIR
PDGPKQEFHDVYVRGMLLFNGVGETLKNLRSRFAGSVLNLQGSLKEFSDIEDMLKQESSEFEKAVVKNRDEAVYKLLSLNQLLWELLLESCIWERRLQSL
LSPDPSVLVTGASEKEVQDRFESQMTGTADGRNHGNDTSSDKVYENSGKLRDTLSTTVRASEFSIKEIPVDGHDHESREHDNLYTSPTVAEDIERSRVSS
LSQNRFFNQELFVKPSDSAHQHSDDGNCQADYFSDIQVERTIPIVTSIGMSDSFVDSDSSKKGTSARSLAFSLENSNGWFWMPFSEIRRIYMKDLQRGFM
PKFQPISSYIQEHVSAAYQLIMEEGQRLHIPVGTDNYMVRDYDGELSSIIACALAFLEDQPVSTELYNEDGRKEGGMSFKSTDSLDILTRIPTMISPRWS
SNGSDSDSVHSKLNISLEESHLSSFDGLNLLEAVVPPANLSPEVSLAVSKSFGKGKYSVICLYAKQFRDLRNRCCPSELDYIASLSRCKKWDAKGGKSNS
FFAKTLDDRFIIKEIKRTEFESFVKFAPHYFKYMNESFELGNQTCLAKVLGIYQVITRQTKSGKEIKHDLMVMENLTFGRNITRQYDLKGALHARYNSAA
DGAGDVLLDKNFVDDMNSSPLYVSNTSKYLLERAVWNDTTFLNSINVMDYSLLVGVDTQRRELVCGIIDYLRQYTWDKQLETWVKSSLVVPKNVLPTVIS
PIEYKKRFRKFMTVHFLSVPDNWCSQSSSNPCELCGAGEDGSSQSKSQKQGQNGHTH
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.013G116400 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.