Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	FGT1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G17050 518 / 0 UGT78D2 UDP-glucosyl transferase 78D2 (.1) AT5G17030 461 / 1e-160 UGT78D3 UDP-glucosyl transferase 78D3 (.1) AT5G17040 447 / 4e-155 UDP-Glycosyltransferase superfamily protein (.1) AT1G30530 421 / 8e-145 UGT78D1 UDP-glucosyl transferase 78D1 (.1) AT1G22380 199 / 3e-58 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT5G59580 195 / 4e-57 UGT76E1 UDP-glucosyl transferase 76E1 (.1) AT3G46680 194 / 7e-57 UDP-Glycosyltransferase superfamily protein (.1) AT1G22360 194 / 1e-56 ATUGT85A2, AT2 UDP-glucosyl transferase 85A2 (.1.2) AT1G22340 191 / 2e-55 ATUGT85A7 UDP-glucosyl transferase 85A7 (.1) AT1G22400 190 / 6e-55 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G118700 [exp] 725 / 0 AT5G17050 533 / 0.0 UDP-glucosyl transferase 78D2 (.1) Potri.018G096000 [exp] 406 / 7e-139 AT5G17050 408 / 1e-139 UDP-glucosyl transferase 78D2 (.1) Potri.006G171100 [exp] 394 / 2e-134 AT5G17050 392 / 2e-133 UDP-glucosyl transferase 78D2 (.1) Potri.006G171268 [exp] 389 / 4e-132 AT5G17050 389 / 5e-132 UDP-glucosyl transferase 78D2 (.1) Potri.009G078400 [exp] 370 / 9e-125 AT5G17050 358 / 6e-120 UDP-glucosyl transferase 78D2 (.1) Potri.009G133300 [exp] 367 / 2e-123 AT5G17050 371 / 8e-125 UDP-glucosyl transferase 78D2 (.1) Potri.006G171156 [exp] 356 / 2e-120 AT5G17050 343 / 1e-115 UDP-glucosyl transferase 78D2 (.1) Potri.006G171128 [exp] 268 / 9e-88 AT5G17050 254 / 1e-82 UDP-glucosyl transferase 78D2 (.1) Potri.015G071900 [exp] 199 / 8e-59 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025854 [exp] 474 / 1e-165 AT5G17050 523 / 0.0 UDP-glucosyl transferase 78D2 (.1) Lus10025741 [exp] 192 / 8e-56 AT1G22380 525 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10024118 [exp] 190 / 8e-55 AT1G05675 375 / 2e-126 UDP-Glycosyltransferase superfamily protein (.1) Lus10021437 [exp] 189 / 2e-54 AT2G36970 530 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10035903 [exp] 186 / 2e-53 AT1G22360 522 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Lus10021438 [exp] 185 / 5e-53 AT2G36970 534 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10010665 [exp] 184 / 2e-52 AT1G22400 516 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10016126 [exp] 184 / 2e-52 AT2G28080 551 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10016128 [exp] 183 / 4e-52 AT2G36970 558 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10024584 [exp] 180 / 4e-51 AT1G22400 570 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [poplar] [flax] GT-B PF00201 [poplar] [flax] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Potri.013G143900.1 pacid=42812628 polypeptide=Potri.013G143900.1.p locus=Potri.013G143900 ID=Potri.013G143900.1.v4.1 annot-version=v4.1 ATGTCCGATCATGTAGCAGTCTTCGCCTTCCCTTTCGGAACCCATGCCGCTCCATTACTCGCCATCATCCACCGCTTAGCCACTGCCTCTCCAAACACAC ACTTCTCCTTCTTCAGCACCCAACAATCCAACAGTTCCATCTTCTCCATTTACAAGAAAAAGATGAATATTATGCAGCCCAACATCAAAGCATACGAAGT GTGGGATGGTGCCCTCGAGGGCTACGTGTTTTCTGGGAATCCCCAAGAGCACATTGAGCTGTTCATGAAGTCAGCTCGTGAGAGCCTCAAGAAGGCCATG GAGGTAGCCGTGTCGGAGACGGGGAGAAAGGTGAGTTGTCTGGTGAGTGATGCCTTCTTTTGGTTCGCTTGTGAGATGGCGGAGGAGATTGGGGTGGGCT GGCTGCCCTTTTGGACTGCAGGACCTAACTCACTTTCTGCTCATGTTTACACTGATCTCATCAGGGAGACTTTTGGAGATGGAGGTATGGTAGGGCGTGA AGATAAAACGATAAGTTTAATTCAAGGAATGTCCAAGATTCGAATCTGTGATTTGCCAGAAGGTGTACTCTTTGGAAACACAGAATCATTCTTTTCAAAC ATGCTACATAAAATGGGAAAAGCGTTACCGCAAGCAGCTGCAGTCTTCATTAACTCCTTTGAAGAGCTAGATCCTGGCACAATAAAGGACTTGAAGTCTA GATTCAAAAAATTTCTCAACATTGGACCCTCCCATTTGATTTTATCACCACCACCCATGGAAGACACATATGGTTGCATGACATGGCTTGACAAGCAAAA ACTTGCTTCGGTAGCATATGTTAGCTTTGGCTCCGTCACAACACCACCACCACATGAACTTGTGGCACTAGCTGAGGCCCTTGAAACAAGTGAGACGCCG TTTATTTGGTCACTTAAGGACAACTCAAAGGTACATTTGCCCCATGGATTCTTGGACAGAACCACCTCACAGGGACTTGTGGTACCATGGAGTCCTCAAT TGGAAGTTTTGGCACATAGAGCAGTTGGGGTGTTTGTAACTCATTGTGGATGGAATTCATTGCTAGAGAGTATTGCCGGAGGAGTGCCAATGATTTGTAG GCCCTTTTTTGGCGATCAAAGGCTCAATGGACGCATGATAGAGGATGTGTGGGAGATTGGTCTCAAAGTTGAGGATGGAGTCTTTACAAAGCTTGAGGTG TTAAATAGTTTGAATAAAATTCTTTCACACGAGGGGGGGCAGAAAATGAGGGAGAATATAAGAGCACTTAAACAACTCGCAAAGAAAGCCATTGGACCAA ATGGGAGCTCTATCAATAATTTTATCGCTTTGTCAAATCTAGTGTTCAATACAAAAATCTAG
AA sequence Show only first row Show all	>Potri.013G143900.1 pacid=42812628 polypeptide=Potri.013G143900.1.p locus=Potri.013G143900 ID=Potri.013G143900.1.v4.1 annot-version=v4.1 MSDHVAVFAFPFGTHAAPLLAIIHRLATASPNTHFSFFSTQQSNSSIFSIYKKKMNIMQPNIKAYEVWDGALEGYVFSGNPQEHIELFMKSARESLKKAM EVAVSETGRKVSCLVSDAFFWFACEMAEEIGVGWLPFWTAGPNSLSAHVYTDLIRETFGDGGMVGREDKTISLIQGMSKIRICDLPEGVLFGNTESFFSN MLHKMGKALPQAAAVFINSFEELDPGTIKDLKSRFKKFLNIGPSHLILSPPPMEDTYGCMTWLDKQKLASVAYVSFGSVTTPPPHELVALAEALETSETP FIWSLKDNSKVHLPHGFLDRTTSQGLVVPWSPQLEVLAHRAVGVFVTHCGWNSLLESIAGGVPMICRPFFGDQRLNGRMIEDVWEIGLKVEDGVFTKLEV LNSLNKILSHEGGQKMRENIRALKQLAKKAIGPNGSSINNFIALSNLVFNTKI

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G17050		UGT78D2	UDP-glucosyl transferase 78D2 ...		Potri.013G143900 [exp]	0	1	FGT1
AT1G17200			Uncharacterised protein family...		Potri.001G436400 [exp]	2.00	0.8531
AT3G22750			Protein kinase superfamily pro...		Potri.008G156000 [exp]	2.44	0.7966
AT3G52740			unknown protein		Potri.009G164000 [exp]	4.79	0.7624
AT1G09700		DRB1, HYL1	HYPONASTIC LEAVES 1, DSRNA-BIN...		Potri.002G111400 [exp]	11.83	0.7524
AT2G46300			Late embryogenesis abundant (L...		Potri.002G167300 [exp]	13.26	0.7625
AT2G45550		CYP76C4	"cytochrome P450, family 76, s...		Potri.001G113900 [exp]	25.03	0.6763
AT3G15620		UVR3	UV REPAIR DEFECTIVE 3, DNA pho...		Potri.003G060000 [exp]	26.15	0.7892
AT5G41210		GSTU12, GST10, ...	glutathione S-transferase THET...		Potri.001G105600 [exp]	28.84	0.7143	ATGSTT1.3
AT1G12110		CHL1-1, CHL1, B...	CHLORINA 1, ARABIDOPSIS THALIA...		Potri.003G111500 [exp]	29.18	0.6753	Pt-PPNRT1.2
AT2G06530		VPS2.1	SNF7 family protein (.1)		Potri.001G170400 [exp]	29.94	0.7271

Compare expression of checked genes

Potri.013G143900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.