Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-DAD1.3
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G44810 557 / 0 DAD1 DEFECTIVE ANTHER DEHISCENCE 1, alpha/beta-Hydrolases superfamily protein (.1) AT4G16820 327 / 3e-107 PLA-I{beta]2 phospholipase A I beta 2, alpha/beta-Hydrolases superfamily protein (.1) AT2G30550 263 / 2e-83 alpha/beta-Hydrolases superfamily protein (.1.2) AT1G06800 257 / 2e-80 PLA-I{gamma}1 phospholipase A I gamma 1, alpha/beta-Hydrolases superfamily protein (.1.2) AT1G51440 254 / 5e-79 alpha/beta-Hydrolases superfamily protein (.1) AT1G30370 252 / 2e-78 DLAH DAD1-like acylhydrolase, alpha/beta-Hydrolases superfamily protein (.1) AT1G05800 231 / 9e-71 DGL DONGLE, alpha/beta-Hydrolases superfamily protein (.1) AT2G31690 215 / 9e-65 alpha/beta-Hydrolases superfamily protein (.1) AT1G06250 181 / 2e-52 alpha/beta-Hydrolases superfamily protein (.1) AT2G42690 171 / 2e-48 alpha/beta-Hydrolases superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G137900 [exp] 731 / 0 AT2G44810 543 / 0.0 DEFECTIVE ANTHER DEHISCENCE 1, alpha/beta-Hydrolases superfamily protein (.1) Potri.014G047700 [exp] 547 / 0 AT2G44810 491 / 9e-174 DEFECTIVE ANTHER DEHISCENCE 1, alpha/beta-Hydrolases superfamily protein (.1) Potri.003G081500 [exp] 332 / 4e-109 AT4G16820 558 / 0.0 phospholipase A I beta 2, alpha/beta-Hydrolases superfamily protein (.1) Potri.001G153100 [exp] 328 / 5e-108 AT4G16820 575 / 0.0 phospholipase A I beta 2, alpha/beta-Hydrolases superfamily protein (.1) Potri.009G051900 [exp] 265 / 2e-83 AT1G51440 700 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Potri.001G263200 [exp] 263 / 2e-82 AT1G30370 607 / 0.0 DAD1-like acylhydrolase, alpha/beta-Hydrolases superfamily protein (.1) Potri.002G044700 [exp] 259 / 4e-81 AT1G06800 662 / 0.0 phospholipase A I gamma 1, alpha/beta-Hydrolases superfamily protein (.1.2) Potri.005G218500 [exp] 251 / 3e-78 AT1G06800 652 / 0.0 phospholipase A I gamma 1, alpha/beta-Hydrolases superfamily protein (.1.2) Potri.009G057900 [exp] 249 / 2e-77 AT1G30370 626 / 0.0 DAD1-like acylhydrolase, alpha/beta-Hydrolases superfamily protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042914 [exp] 469 / 3e-164 AT2G44810 464 / 1e-163 DEFECTIVE ANTHER DEHISCENCE 1, alpha/beta-Hydrolases superfamily protein (.1) Lus10041165 [exp] 451 / 2e-157 AT2G44810 464 / 4e-164 DEFECTIVE ANTHER DEHISCENCE 1, alpha/beta-Hydrolases superfamily protein (.1) Lus10004364 [exp] 324 / 3e-106 AT4G16820 587 / 0.0 phospholipase A I beta 2, alpha/beta-Hydrolases superfamily protein (.1) Lus10040158 [exp] 320 / 2e-104 AT4G16820 573 / 0.0 phospholipase A I beta 2, alpha/beta-Hydrolases superfamily protein (.1) Lus10010997 [exp] 318 / 1e-103 AT4G16820 551 / 0.0 phospholipase A I beta 2, alpha/beta-Hydrolases superfamily protein (.1) Lus10038524 [exp] 233 / 8e-72 AT1G30370 526 / 0.0 DAD1-like acylhydrolase, alpha/beta-Hydrolases superfamily protein (.1) Lus10038526 [exp] 235 / 1e-71 AT1G30370 539 / 0.0 DAD1-like acylhydrolase, alpha/beta-Hydrolases superfamily protein (.1) Lus10015521 [exp] 231 / 2e-71 AT1G30370 524 / 0.0 DAD1-like acylhydrolase, alpha/beta-Hydrolases superfamily protein (.1) Lus10000600 [exp] 211 / 8e-66 AT4G16820 304 / 4e-101 phospholipase A I beta 2, alpha/beta-Hydrolases superfamily protein (.1) Lus10025519 [exp] 218 / 1e-65 AT2G31690 468 / 3e-162 alpha/beta-Hydrolases superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [poplar] [flax] AB_hydrolase PF01764 [poplar] [flax] Lipase_3 Lipase (class 3)
Representative CDS sequence Show only first row Show all	>Potri.014G047900.2 pacid=42763981 polypeptide=Potri.014G047900.2.p locus=Potri.014G047900 ID=Potri.014G047900.2.v4.1 annot-version=v4.1 ATGAGGTCTTCTGTTGGACTTGCAAAGCCATGCACAGTCCCACCCACTAGAGACATGACATTGGAGTGCTGCACTCTCACTCAACCCATAAAACTCAACA AAAAGTTCTTACAAAATCAACCTCTAAAAAATTGGGAAGGCCTGCTTGACCCGGTTCGCCATGAATCGGCGACTGCATCCCGGCCGGTTAAACTAAGACG GAAATGGATGGAGTATCAAGGTATTCGAAACTGGGAAGGTTTGCTTGACCCTCTTGATGATAATTTACGTGGAGAAATTCTTCGGTATGGACACTTTGTC GATGCTGCATATAAGTCTTTTGACTTCGATCCTTCATCACCCACCTATGCAACCTGCCGGTTCCCAAAGAGCACATTGTTTGAACGGTCCGGTAAACCGG ATACTGGTTACCGGCTAACCAAACATCTACGTGCAACATCGGGAATCCAAATCCCACGTTGGATTGAAAAGGCACCTAGTTGGGTGTTTACCCAGTCCAG TTGGATTGGATACGTAGCCGTTTCTCTAAACAAGGCAGAAATTGCGAGGCTAGGACGCAGAGACGTGGTGATTGCCTTTAGAGGTACTGCCACTTGCCTT GAATGGCTGGAGAATCTTAGAGCAACCCTGACTCAACTGCCAAATTCAGATTGTGGCAAAAAAGGCTCGGACGATTCTGGACCCATGGTAGAAAGCGGAT TTTTGAGCCTTTACACTTCAGGAACACCAATGGGTCCTAGTTTACAAGAAATGGTGCGTCAAGAGATCAAAAGGCTACTCCATACTTATGGTGATGAACC TCTTAGCTTAACCATTACAGGACACAGTCTTGGAGCTGCACTTGCTACTCTTGCTGCTTATGACATCAAGACTACATTCAACTGTGCGCCACTTGTGACT GTCATTTCTTTCGGAGGTCCGCGTGTCGGTAACAGGAGTTTCAGACGACACCTGGAAAAACAAGGAACGAAAGTCCTGCGTATTGTAAATTCAGATGATG TAATAACAAAAGTACCTGGATTTGTAATTGATGGGGAGAACAATGTGCCAAATAAAGGAGACCTCAATATGGCAAGCTTGCCTAGTTGGATCCAAAAAAA GGTAGAGGACACACAATGGGTCTATGCAGAAGTTGGCAGGGAGCTAAGACTTAGTAGCAAGGATTCTCCATATCTCAATAGCATCAATGTAGCAGCATGT CATGATTTGAAGACTTACCTGCATCTGGTGAATGGATTTGTAAGCTCCTCCTGTCCTTTTAGAGCAAAAGCAAAGCGTTTTTTTCTTAGCAACCACCGTA GATAA
AA sequence Show only first row Show all	>Potri.014G047900.2 pacid=42763981 polypeptide=Potri.014G047900.2.p locus=Potri.014G047900 ID=Potri.014G047900.2.v4.1 annot-version=v4.1 MRSSVGLAKPCTVPPTRDMTLECCTLTQPIKLNKKFLQNQPLKNWEGLLDPVRHESATASRPVKLRRKWMEYQGIRNWEGLLDPLDDNLRGEILRYGHFV DAAYKSFDFDPSSPTYATCRFPKSTLFERSGKPDTGYRLTKHLRATSGIQIPRWIEKAPSWVFTQSSWIGYVAVSLNKAEIARLGRRDVVIAFRGTATCL EWLENLRATLTQLPNSDCGKKGSDDSGPMVESGFLSLYTSGTPMGPSLQEMVRQEIKRLLHTYGDEPLSLTITGHSLGAALATLAAYDIKTTFNCAPLVT VISFGGPRVGNRSFRRHLEKQGTKVLRIVNSDDVITKVPGFVIDGENNVPNKGDLNMASLPSWIQKKVEDTQWVYAEVGRELRLSSKDSPYLNSINVAAC HDLKTYLHLVNGFVSSSCPFRAKAKRFFLSNHRR

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G44810		DAD1	DEFECTIVE ANTHER DEHISCENCE 1,...		Potri.014G047900 [exp]	0	1	Pt-DAD1.3
AT3G47340		AT-ASN1, DIN6, ...	DARK INDUCIBLE 6, ARABIDOPSIS ...		Potri.009G072900 [exp]	5.29	0.8577	Pt-AS1.3
AT4G32480			Protein of unknown function (D...		Potri.011G053300 [exp]	26.60	0.8590
AT2G01900			DNAse I-like superfamily prote...		Potri.018G144101 [exp]	35.49	0.8474
AT5G65207			unknown protein		Potri.005G081400 [exp]	43.72	0.8426
AT5G56550		ATOXS3	oxidative stress 3 (.1)		Potri.001G190700 [exp]	45.69	0.8351
					Potri.004G202433 [exp]	55.49	0.8173
AT4G27450			Aluminium induced protein with...		Potri.011G049900 [exp]	81.42	0.8232
AT1G54740			Protein of unknown function (D...		Potri.008G019600 [exp]	100.23	0.7884
AT5G16560	GARP	KAN1, KAN	KANADI 1, KANADI, Homeodomain-...		Potri.004G082400 [exp]	109.21	0.8118
AT4G28670			Protein kinase family protein ...		Potri.007G056000 [exp]	117.47	0.7992

Compare expression of checked genes

Potri.014G047900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.