Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-CYP86.6
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G45970 866 / 0 CYP86A8, LCR LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) AT4G00360 852 / 0 ATT1, CYP86A2 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) AT1G01600 849 / 0 CYP86A4 "cytochrome P450, family 86, subfamily A, polypeptide 4", cytochrome P450, family 86, subfamily A, polypeptide 4 (.1) AT1G63710 781 / 0 CYP86A7 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) AT5G58860 665 / 0 CYP86A1 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) AT5G23190 459 / 1e-156 CYP86B1 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) AT5G08250 453 / 3e-155 Cytochrome P450 superfamily protein (.1) AT1G13150 377 / 8e-125 CYP86C4 "cytochrome P450, family 86, subfamily C, polypeptide 4", cytochrome P450, family 86, subfamily C, polypeptide 4 (.1) AT1G34540 375 / 2e-124 CYP94D1 "cytochrome P450, family 94, subfamily D, polypeptide 1", cytochrome P450, family 94, subfamily D, polypeptide 1 (.1) AT1G13140 373 / 2e-123 CYP86C3 "cytochrome P450, family 86, subfamily C, polypeptide 3", cytochrome P450, family 86, subfamily C, polypeptide 3 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G129100 [exp] 835 / 0 AT1G63710 823 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Potri.009G043700 [exp] 666 / 0 AT5G58860 827 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.001G249700 [exp] 652 / 0 AT5G58860 790 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.007G072100 [exp] 454 / 2e-154 AT5G23190 799 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.005G092200 [exp] 444 / 1e-150 AT5G23190 788 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.008G183300 [exp] 386 / 2e-128 AT1G24540 682 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.010G050100 [exp] 375 / 4e-124 AT1G24540 684 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.006G033600 [exp] 363 / 4e-120 AT3G56630 576 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Potri.016G031700 [exp] 360 / 1e-118 AT3G56630 629 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032278 [exp] 798 / 0 AT1G63710 792 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10014768 [exp] 793 / 0 AT4G00360 756 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) Lus10040687 [exp] 664 / 0 AT5G58860 803 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10018217 [exp] 663 / 0 AT5G58860 802 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10024644 [exp] 551 / 0 AT1G63710 562 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10017789 [exp] 467 / 1e-163 AT2G45970 465 / 1e-163 LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) Lus10018830 [exp] 465 / 4e-163 AT2G45970 465 / 8e-164 LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) Lus10010193 [exp] 442 / 5e-150 AT5G23190 741 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10040986 [exp] 439 / 2e-148 AT5G23190 751 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10017394 [exp] 439 / 3e-148 AT5G23190 739 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.014G085800.3 pacid=42763924 polypeptide=Potri.014G085800.3.p locus=Potri.014G085800 ID=Potri.014G085800.3.v4.1 annot-version=v4.1 ATGGATATGTCTACAGCTCTACTTCTTTTTGCTGCTGTAACTACTTATCTACTGTGGTTAACATTCATCTCGCGGTCACTAAAGGGCCCACGTGTGTATC CCTTACTGGGCAGTCTTCCTGGCTTGATCGAGAATTGTGACCGCTTGCATGACTGGATCTACGACAACCTCCGCGCGTGTGGTGGTACGTACCAGACCTG CATCTGTGCAATTCCCTTTTTAGCCAAGAAGCAAGGCCTCGTGACTGTCACGTGCGACCCGAGAAATATAGAGCACCTCTTGAAGACCCGGTTCGACAAT TACCCAAAGGGACCCACATGGCAAGCTGTGTTCCATGACCTTCTTGGTGAAGGGATCTTCAACTCTGACGGTGACACGTGGCTGTTCCAGCGTAAGACTG CCGCACTGGAGTTCACCACCAGGACTCTTCGCCAAGCCATGGCTCGGTGGGTGAGTAGAGCCATCAAGTTGAGGTTCTGCCCAGTCCTTGAAACAGCTCA GCTCAAAGGCGAGCAGGTTGATCTCCAAGACTTGTTACTTCGGCTCACGTTTGACAACATTTGTGGTTTGGCTTTTGGCAAGGACCCGCAGACGTGCGCA CCAGGGCTTCCTGAAAACAGCTTTGCTTCAGCTTTCGACCGAGCCACTGAAGCATCACTTCAGAGATTCATTTTGCCAGAAGTTTTGTGGAAGCTGAAAA AATGGCTTCGACTTGGCTTGGAAGTCAGCTTGAACAGAAGCTTAACCCAGCTTGACGATTACCTGACCAACGTTATTGATGCACGTAAGAAAGAGTTATT GAATCAACAAAAAGATCGTAACATTCCACATGATGATTTGCTGTCAAGATTCATGAAGAAGAAGGAATCCTACTCAGACACTTTCCTTCAACACGTAGCA CTCAATTTTATCCTTGCTGGACGTGACACGTCATCAGTGGCGTTGAGCTGGTTCTTTTGGCTCCTCACCCAAAATCCATCGGTGGAGGAGAAAATCTTGC ATGAAATTTGCACGGTCCTGATCAAGACACGTGGTGATGACGTGACAAAATGGGTTGACGAGCCGTTAGGGTTCGAAGAAGTAGACAGTTTGATATATCT AAAAGCAGCTTTATCAGAAACCCTAAGGCTTTACCCTTCGGTGCCTCAGGACTCAAAGCATGTAGTTGCCGACGATGTGTTGCCGGATGGTACATTTGTG CCGGCGGGATCTTCGGTCACCTATTCTATATATGCATCTGGGAGGATGAAGACCACATGGGGCGAAGATTGCTTGGAATTCAAGCCAGAGCGGTGGTTGT CTTCTGATGGGGAAAAATTCATCATGCATGATTCATACAAGTTTGTGGCATTCAATGCAGGCCCTAGAATCTGTTTAGGGAAAGACCTGGCTTATCTTCA GATGAAATCGGTGGCGGCGGCGGTGCTGTTACGCCACCGTCTCTCAGTTGTTCAGGGTCACAAGGTGGAGCAAAAGATGTCACTAACATTGTTCATGAAA CACGGGCTTAAAGTTAATGTGCATAAGAGGGATCTGGAGGGTACCGCGGCAAGAATAATAAAGAAGGGTAAAGAAGGAGAGTCACGCCAGTTGCTGCATG GGAATAATGAGGCAATTGCCGTTAGATATAACGGTGGTGGGTGTAACGGCGCTAGTGAGAGTGCTGCTGGGAAGGGAGCGGTGGTTGGGGTTGTTTAA
AA sequence Show only first row Show all	>Potri.014G085800.3 pacid=42763924 polypeptide=Potri.014G085800.3.p locus=Potri.014G085800 ID=Potri.014G085800.3.v4.1 annot-version=v4.1 MDMSTALLLFAAVTTYLLWLTFISRSLKGPRVYPLLGSLPGLIENCDRLHDWIYDNLRACGGTYQTCICAIPFLAKKQGLVTVTCDPRNIEHLLKTRFDN YPKGPTWQAVFHDLLGEGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPVLETAQLKGEQVDLQDLLLRLTFDNICGLAFGKDPQTCA PGLPENSFASAFDRATEASLQRFILPEVLWKLKKWLRLGLEVSLNRSLTQLDDYLTNVIDARKKELLNQQKDRNIPHDDLLSRFMKKKESYSDTFLQHVA LNFILAGRDTSSVALSWFFWLLTQNPSVEEKILHEICTVLIKTRGDDVTKWVDEPLGFEEVDSLIYLKAALSETLRLYPSVPQDSKHVVADDVLPDGTFV PAGSSVTYSIYASGRMKTTWGEDCLEFKPERWLSSDGEKFIMHDSYKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHRLSVVQGHKVEQKMSLTLFMK HGLKVNVHKRDLEGTAARIIKKGKEGESRQLLHGNNEAIAVRYNGGGCNGASESAAGKGAVVGVV

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G45970		CYP86A8, LCR	LACERATA, "cytochrome P450, fa...		Potri.014G085800 [exp]	0	1	Pt-CYP86.6
AT2G26910		PEC1, ABCG32, P...	PERMEABLE CUTICLE 1, ATP-bindi...		Potri.018G074500 [exp]	1.41	0.9659
AT1G74670		GASA6	GA-stimulated Arabidopsis 6, G...		Potri.001G254100 [exp]	4.12	0.9678
AT5G04820	OFP	ATOFP13, OFP13	ARABIDOPSIS THALIANA OVATE FAM...		Potri.010G241500 [exp]	8.66	0.9220
AT3G03190		ATGSTF6, ATGSTF...	ARABIDOPSIS GLUTATHIONE-S-TRAN...		Potri.002G015100 [exp]	9.21	0.9185
AT1G78170			unknown protein		Potri.005G165300 [exp]	10.48	0.9583
AT3G17860	ZIM	TIFY6B, JAI3, J...	JASMONATE-INSENSITIVE 3, jasmo...		Potri.015G035800 [exp]	11.26	0.9055
AT5G11420			Protein of unknown function, D...		Potri.006G250100 [exp]	13.26	0.9598
AT1G29730			Leucine-rich repeat transmembr...		Potri.016G012300 [exp]	13.41	0.9398
AT5G20110			Dynein light chain type 1 fami...		Potri.001G124700 [exp]	14.28	0.8785
AT5G28840		GME	"GDP-D-mannose 3',5'-epimerase...		Potri.005G053000 [exp]	14.62	0.8750

Compare expression of checked genes

Potri.014G085800 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.