Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G42390 1815 / 0 SPP stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) AT5G56730 92 / 1e-18 Insulinase (Peptidase family M16) protein (.1) AT3G02090 65 / 2e-10 MPPBETA Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) AT2G41790 53 / 1e-06 Insulinase (Peptidase family M16) family protein (.1) AT3G57470 51 / 6e-06 Insulinase (Peptidase family M16) family protein (.1), Insulinase (Peptidase family M16) family protein (.2), Insulinase (Peptidase family M16) family protein (.3) AT1G06900 45 / 0.0003 Insulinase (Peptidase family M16) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G235700 [exp] 2280 / 0 AT5G42390 1822 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) Potri.004G118900 [exp] 61 / 4e-09 AT3G02090 822 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.017G092400 [exp] 58 / 4e-08 AT3G02090 832 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.006G050700 [exp] 57 / 1e-07 AT2G41790 1503 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.013G154600 [exp] 47 / 0.0001 AT1G06900 1461 / 0.0 Insulinase (Peptidase family M16) family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041263 [exp] 1896 / 0 AT5G42390 1789 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) Lus10021970 [exp] 1191 / 0 AT5G42390 1122 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) Lus10021971 [exp] 666 / 0 AT5G42390 629 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) Lus10012918 [exp] 97 / 7e-20 AT5G56730 1501 / 0.0 Insulinase (Peptidase family M16) protein (.1) Lus10004939 [exp] 59 / 2e-08 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040886 [exp] 54 / 1e-06 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040885 [exp] 53 / 1e-06 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10018072 [exp] 51 / 6e-06 AT2G41790 1451 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10042213 [exp] 50 / 2e-05 AT1G06900 1311 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10018071 [exp] 45 / 0.0007 AT2G41790 1377 / 0.0 Insulinase (Peptidase family M16) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [poplar] [flax] Peptidase_ME PF00675 [poplar] [flax] Peptidase_M16 Insulinase (Peptidase family M16) CL0094 [poplar] [flax] Peptidase_ME PF05193 [poplar] [flax] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Potri.014G149200.2 pacid=42763147 polypeptide=Potri.014G149150.1.p locus=Potri.014G149200 ID=Potri.014G149200.2.v4.1 annot-version=v4.1 ATGGCAGCTACAGCTGCCTCAAGTTCTGTATTGATGATGAACGTGCCTCAAACCCGTGCACCCCTTACTCCTCCTAAAGATGATACTCTCTCAAGGAAGA ACCGGATAAACCTAATTCAGCCTCGCCGATTCCCTTTGATTCGATTCCACTCCAACCACCATCAATCTTGGAATTCCGTTTCCTCCAAAAGGTGGTCACA CGAGATTGCTACGGGTGGATCAGGCTCTCTTAGAAAGAAGAATAATGCTTGGAAACAATGTAGTTCTTCCCTCGGCGAGAGAGTGGTCGGGGCATATTTT CCAGAACAATTTAAGTGCATGTCTTGCTCCCTTAACCGTCTTAGAAGCCGCTATAGCATCAAAGGATCTACACCAACTATACCAAGAGCCTTTGTTGATA AGTCTGCTTTTAATTTGTCTGGCCATTCACTTGATACTGCTTCTGTGAAGCATGTTCATGTCCCATGTACATCGATGGGTCCAAATGAGCCACATGCAGC AAGTATAGGCTGCCCAGATGGTATTCTTGAGAGACAAGATTCTGATTTATTAGATTCGGAATTAGAAAGGGCAAGACTATTTGAGTTTTTGCATTCTGAA CTTCCATGTCACCCAAAGTTGCACAGAGGGCAACTGAAAAATGGACTCCGTTATCTTATTCTACCAAATAAAGTTCCACCAAACAGGTTTGAGGCACACA TGGAAGTTCATGCAGGATCAATAGACGAGGAAGATGATGAGCAAGGAATTGCACATATGATTGAACATGTTGCATTCCTTGGAAGTAAGAAACGCGAGAA ACTTCTCGGAACAGGTGCCCGATCTAATGCTTACACTGATTTCCACCATACAGTTTTCCACATTCATTCACCAACTAGTACAAAGGATGCTGATGGAGAT CTACTCCCCTCTGTGCTGGATGCCTTGAATGAGATAGCTTTCCACCCAAGTTTCCTTGCTTCTCGAGTTGAAAAGGAAAGGCGCGCTATACTTTCAGAAC TACAAATGATGAATACTATAGAATATCGTGTTGACTGCCAGCTGTTACAACATCTACATTCAGAAAACAAGCTTAGCAAAAGGTTCCCGATTGGACTGGA AGAGCAGATTAAGAAGTGGGATGCAGATAAAATTAGGAAATTTCATGAGCGTTGGTACTTCCCTGCAAATGCAACTCTATACATTGTTGGCGACATTGAT AACATTTCAAAGACAGTTCACCAGATTGAAAATGTCTTTGGACAAACTGGTCTGGAAACCGAGACAGTTTCTGCTCCTTCTCCAAGTGCATTTGGTGCAA TGGCTAGTTTTCTTGTTCCTAAACTCTCAGTTGGGCTCCCTGGAAGTTCGTCCCGTGAAAAATCATCTATTTCTCTTGACCAATCTAAAATCATTAAAAA GGAAAGGCATGCGGTTCGTCCTCCTGTGGAGCATTATTGGTCTCTCCCTGGAAGCAATGCAAATTTGAAGCCACCACAGATATTTCAGCACGAGTTTCTT CAGAATTTCTCAATTAATATGTTCTGCAAGATTCCGGTGAGCAAGGTCCAAACATATGGTGACTTGCGTAATGTTTTGATGAAGAGAATTTTTCTATCTG CACTGCACTTCCGGATTAATACAAGATACAAGAGTTCAAATCCACCATTCACTTCAGTTGAATTGGATCATAGTGATTCTGGAAGGGAAGGATGCACTGT CACAACTCTTACAGTAACTGCAGAACCCAAGAATTGGCAAAATGCAATTAAAGTTGCTGTTCAAGAGGTTCGAAGGCTTAAAGAATTTGGTGTCACAAAA GGTGAATTAAATCGCTACATGGATGCTCTTCTAAAAGATAGCGAACATCTGGCAGCCATGATTGATAATGTGTCATCTGTTGATAATTTGGAATTTATCA TGGAGAGTGATGCTCTTGGCCATACTGTGATGGATCAGAGACAGGGACATGAGAGTTTGTTTGGTGTTGCTGGAACAGTCACACTTGAAGAAGTCAATTC TATTGGTGCCAAGTTATTAGAATTTATCTCTGATTTTGGAAAACCAACCGCACCAATTCCTGCAGCAATTGTTGCATGTGTTCCTTCAAAAGTGTATTTT GATGGATTGGGTGAAACTGAGTTCAAGATATCATCAAGTGAGATTATAGCTGCCATAAAATCAGGATTGGAGGAAGCAATTGAGGCTGAGCCAGAGCTTG AAGTGCCAAAGGAACTGATAACTTCAACACAGTTAGAGGAGTTACGATTACAACTCACGCCGTCCTTTATCCCTTTAGTTCCAGATGCAGATTACACGAA ATTGCACGACCCAGAAACAGGCATCACTCAGTGTCGTCTTTCAAATGGAATTGCTGTAAATTACAAGATATCTAAAAGTGAATCCCGGGGAGGTGTCATG CGGCTAATTGTGGGTGGGGGCCGAGCAGCTGAAAGTTCTGAGTCAAAAGGAGCAGTTGTTGTGGGTGTTCGAACTCTCAGTGAGGGTGGTCGTGTTGGCA ACTTTTCAAGAGAACAGGTAGAACTTTTTTGTGTGAATCACCTGATAAATTGCTCTTTGGAGTCAACTGAGGAATTTATTTGTATGGAGTTCCGCTTTAC TCTGCGAGACAATGGGATGCGAGCAGCATTTGAGTTACTTCATATGGTGCTTGAGCATAGCGTTTGGCTGGATGATGCATTGGACAGAGCCAGGCAACTA TACTTGTCATATTACCGGTCTATTCCCAAAAGCTTAGAACGTGCAACTGCTCACAAGCTCATGACAGCAATGTTGAATGGGGATGAGCGATTTATTGAGC CAACCCCACAATCATTACAAAATCTAACACTGAAATCCGTAAAGGATGCAGTGATGAATCAGTTTGTTGGTGGAAACATGGAGGTCAGTATTGTTGGGGA TTTCTCGGAGGAGGAGATTGAGTCTTGCATTATTGATTACCTGGGCACAGTTAGAGCAACAAGAGATTCTGATCGTGAACAAGAATTCAATCCTGTCATG TTTCGACCATCGCCATCTGATTTGCAATTTCAACAAGTCTTTTTGAAGGATACTGATGAGAGAGCATGTGCATATATTGCTGGTCCTGCACCAAATCGTT GGGGTTTCACTGTTGATGGAAAAGACCTATTTGAGTCGACGAGTGGCATTTCAGTTACAGCTGATACACAACCAAATTCTGACCCACAGCAGATAGACAG GAAGGATGTCCAGAAGGATAAGCAAGGAAAACTTCGCAGTCATCCTCTCTTTTTTGGCATAACAATGGGGCTACTGGCTGAGATCATAAATTCACGGCTT TTTACCACAGTCAGGGATTCTCTTGGGTTGACATATGATGTATCGTTTGAGTTAAGCCTGTTTGATAGGCTTAAGCTTGGATGGTATGTGGTATCAGTAA CATCAACTCCAGGCAAGGTACATAAAGCGGTTGATGCATGCAAAAGTGTTCTTAGAGGGTTGCATAGCAACAAGGTTGCCCAGAGAGAGTTGGACAGGGC AAAACGGACACTGCTAATGAGACATGAAACTGAGATTAAGTCCAATGCCTACTGGCTTGGATTGCTTGCTCATTTGCAAGCCTCTTCTGTTCCGAGAAAG GACGTCTCATGCATTAAAGATCTCACTTCACTATATGAAGCAGCAACTATTGAGGACATATACGTTGCATATGAACAGTTGAAAGTAGATGAGGATTCTC TGTATTCATGCATTGGGGTTGCTGGGGCACAAGCTGGAGAGGAGATTAATGCTTTAGAAGAGGAAGAAACAGATGATGATTTTCAGGGAGTCATACCTGT GGGACGTGGTTTGTCTACAATGACACGGCCAACCACTTGA
AA sequence Show only first row Show all	>Potri.014G149200.2 pacid=42763147 polypeptide=Potri.014G149150.1.p locus=Potri.014G149200 ID=Potri.014G149200.2.v4.1 annot-version=v4.1 MAATAASSSVLMMNVPQTRAPLTPPKDDTLSRKNRINLIQPRRFPLIRFHSNHHQSWNSVSSKRWSHEIATGGSGSLRKKNNAWKQCSSSLGERVVGAYF PEQFKCMSCSLNRLRSRYSIKGSTPTIPRAFVDKSAFNLSGHSLDTASVKHVHVPCTSMGPNEPHAASIGCPDGILERQDSDLLDSELERARLFEFLHSE LPCHPKLHRGQLKNGLRYLILPNKVPPNRFEAHMEVHAGSIDEEDDEQGIAHMIEHVAFLGSKKREKLLGTGARSNAYTDFHHTVFHIHSPTSTKDADGD LLPSVLDALNEIAFHPSFLASRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDID NISKTVHQIENVFGQTGLETETVSAPSPSAFGAMASFLVPKLSVGLPGSSSREKSSISLDQSKIIKKERHAVRPPVEHYWSLPGSNANLKPPQIFQHEFL QNFSINMFCKIPVSKVQTYGDLRNVLMKRIFLSALHFRINTRYKSSNPPFTSVELDHSDSGREGCTVTTLTVTAEPKNWQNAIKVAVQEVRRLKEFGVTK GELNRYMDALLKDSEHLAAMIDNVSSVDNLEFIMESDALGHTVMDQRQGHESLFGVAGTVTLEEVNSIGAKLLEFISDFGKPTAPIPAAIVACVPSKVYF DGLGETEFKISSSEIIAAIKSGLEEAIEAEPELEVPKELITSTQLEELRLQLTPSFIPLVPDADYTKLHDPETGITQCRLSNGIAVNYKISKSESRGGVM RLIVGGGRAAESSESKGAVVVGVRTLSEGGRVGNFSREQVELFCVNHLINCSLESTEEFICMEFRFTLRDNGMRAAFELLHMVLEHSVWLDDALDRARQL YLSYYRSIPKSLERATAHKLMTAMLNGDERFIEPTPQSLQNLTLKSVKDAVMNQFVGGNMEVSIVGDFSEEEIESCIIDYLGTVRATRDSDREQEFNPVM FRPSPSDLQFQQVFLKDTDERACAYIAGPAPNRWGFTVDGKDLFESTSGISVTADTQPNSDPQQIDRKDVQKDKQGKLRSHPLFFGITMGLLAEIINSRL FTTVRDSLGLTYDVSFELSLFDRLKLGWYVVSVTSTPGKVHKAVDACKSVLRGLHSNKVAQRELDRAKRTLLMRHETEIKSNAYWLGLLAHLQASSVPRK DVSCIKDLTSLYEAATIEDIYVAYEQLKVDEDSLYSCIGVAGAQAGEEINALEEEETDDDFQGVIPVGRGLSTMTRPTT

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G42390		SPP	stromal processing peptidase, ...		Potri.014G149200 [exp]	0	1
AT3G21250		ATMRP6, ABCC8	ARABIDOPSIS THALIANA MULTIDRUG...		Potri.003G034700 [exp]	2.00	0.9633
AT3G59140		ATMRP14, ABCC10	ATP-binding cassette C10, mult...		Potri.012G033500 [exp]	5.65	0.9391
AT5G50920		CLPC1, CLPC, AT...	HEAT SHOCK PROTEIN 93-V, DE-RE...		Potri.015G105100 [exp]	7.34	0.9536	Pt-CLPC.2
AT1G21640		ATNADK2, NADK2,...	NAD kinase 2 (.1.2)		Potri.002G078700 [exp]	10.00	0.9460	NADK2.2
AT5G65500			U-box domain-containing protei...		Potri.007G011500 [exp]	10.90	0.9325
AT5G12950			Putative glycosyl hydrolase of...		Potri.003G206000 [exp]	11.83	0.9366
AT5G17520		MEX1, RCP1	MALTOSE EXCESS 1, root cap 1 (...		Potri.013G076100 [exp]	11.95	0.9364
AT1G69830		ATAMY3, AMY3	alpha-amylase-like 3 (.1)		Potri.010G092900 [exp]	13.07	0.9294
AT4G14605			Mitochondrial transcription te...		Potri.017G067600 [exp]	13.41	0.9285
AT5G42390		SPP	stromal processing peptidase, ...		Potri.002G235700 [exp]	13.85	0.9355

Compare expression of checked genes

Potri.014G149200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.