Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G14180 421 / 1e-145 MPL1 Myzus persicae-induced lipase 1 (.1) AT2G15230 327 / 2e-109 ATLIP1 lipase 1 (.1) AT1G73920 110 / 6e-26 alpha/beta-Hydrolases superfamily protein (.1.2) AT1G18460 107 / 5e-25 alpha/beta-Hydrolases superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G159800 [exp] 738 / 0 AT5G14180 422 / 3e-146 Myzus persicae-induced lipase 1 (.1) Potri.014G159700 [exp] 572 / 0 AT5G14180 441 / 5e-154 Myzus persicae-induced lipase 1 (.1) Potri.001G332300 [exp] 429 / 2e-149 AT5G14180 533 / 0.0 Myzus persicae-induced lipase 1 (.1) Potri.017G069700 [exp] 330 / 1e-110 AT5G14180 374 / 4e-128 Myzus persicae-induced lipase 1 (.1) Potri.009G094900 [exp] 323 / 1e-107 AT2G15230 564 / 0.0 lipase 1 (.1) Potri.012G060600 [exp] 113 / 6e-27 AT1G73920 917 / 0.0 alpha/beta-Hydrolases superfamily protein (.1.2) Potri.006G210325 [exp] 42 / 0.0008 AT1G03990 67 / 4e-11 Long-chain fatty alcohol dehydrogenase family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10038401 [exp] 509 / 1e-180 AT5G14180 383 / 4e-131 Myzus persicae-induced lipase 1 (.1) Lus10038378 [exp] 504 / 2e-179 AT5G14180 377 / 2e-129 Myzus persicae-induced lipase 1 (.1) Lus10031523 [exp] 474 / 6e-167 AT5G14180 410 / 1e-141 Myzus persicae-induced lipase 1 (.1) Lus10015159 [exp] 473 / 2e-166 AT5G14180 409 / 2e-141 Myzus persicae-induced lipase 1 (.1) Lus10023171 [exp] 469 / 4e-165 AT5G14180 358 / 3e-121 Myzus persicae-induced lipase 1 (.1) Lus10015158 [exp] 438 / 9e-153 AT5G14180 351 / 2e-118 Myzus persicae-induced lipase 1 (.1) Lus10041571 [exp] 424 / 1e-146 AT5G14180 525 / 0.0 Myzus persicae-induced lipase 1 (.1) Lus10031524 [exp] 422 / 4e-146 AT5G14180 359 / 2e-121 Myzus persicae-induced lipase 1 (.1) Lus10022349 [exp] 422 / 7e-146 AT5G14180 527 / 0.0 Myzus persicae-induced lipase 1 (.1) Lus10002808 [exp] 328 / 6e-108 AT2G15230 551 / 0.0 lipase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [poplar] [flax] AB_hydrolase PF04083 [poplar] [flax] Abhydro_lipase Partial alpha/beta-hydrolase lipase region
Representative CDS sequence Show only first row Show all	>Potri.014G159900.1 pacid=42763671 polypeptide=Potri.014G159900.1.p locus=Potri.014G159900 ID=Potri.014G159900.1.v4.1 annot-version=v4.1 ATGGCCGAGATTTTAGCCACTCAAATTCTAGCGATCCTATTCTGTTTATCGGCAGCTGCGGCCGCTGCAGGAACAAAGTTTTATTCCTTCAATAGTCAGG ATGGCACATCTGTGTCCTCCCTGAATGCCAATGATGGTACTTGCAAATCGGTGGTGGAGCCACAAGGCTACGCCTGCCAGGAACATACGGTAACAACAAA AGATGGTTATATTCTTAGCCTTCAGAGAATGCCTTCTGGGCTGTCCGGTCAGGCAGCAGACAAGCCGCCAGTTCTGCTACAACATGGGCTAATGATGGAT GGCGTAACGTGGCTGATGAATCTTCCTGATGAATCTTTGGCATTCATATTGGCGGATAATGGTTATGATGTGTGGATTGCCAACAGTCGTGGGACTAGAT TTAGCCGGGGCCACGCATCACTCCATCCCAATGATTCGGTTTATTGGGATTGGACCTGGGATGAGTTGGCTGCCTATGATCTTCCTGCTACATTTCAGTA TGTGCATGACCAGACAGGGCAGAACCTTCACTATGTTGGGCATTCCCAGGGGACTTTGATTGCTTTTGCTGCATTTTCTCAAGAAAAGTTATTGAACATG TTAAGATCGGCTGTTTTGCTCAGTCCAATAGCTTATCTTAACCAGATGCCATCACCGCTTGCAAGAGGTGCTGCCGATATATTTCTAGCTGAGGACTTGT ACTGGTTAGGACTCCATGAATTTGTTCCTCGAGGGCAGGCTGCGAACAAGCTTCTGGAAGATATCTGCAGTAAGCCTGGGACCAACTGCTCTGACTTCAT GACAGTTTTCACTGGCCCGAATTGCTGCCTGAATTCTTCTAGGACAAATGAATTTCTTGATCATGAACCTCAATCAACAGCAACCAAGAACATGATCCAC CTGGCACAGATGATTAGGACGGGAACGATAGCAATGTATGATTATGGTAATGAAAATGATAACATGGATCATTACGGGCAGCCTACTCCTCCAGTGTATA ACATGACCAGCATCCCTAATGACCTTCCTCTTTTTCTTGGCTATGGAGGGAAGGACTATCTTTCTGATGTGAAGGATGTACAAATTCTACTAGACAACCT CAAAGATCACGATGGCGACAAGCTGGTGGTACAGTACACCGATGAATATGCTCATGCAGATTTTGTTTTTGGCGTGAATGCTAATCAGATTGTTTATGAT CCTTTAATAGCCTTCTTTAAGATCAACTGA
AA sequence Show only first row Show all	>Potri.014G159900.1 pacid=42763671 polypeptide=Potri.014G159900.1.p locus=Potri.014G159900 ID=Potri.014G159900.1.v4.1 annot-version=v4.1 MAEILATQILAILFCLSAAAAAAGTKFYSFNSQDGTSVSSLNANDGTCKSVVEPQGYACQEHTVTTKDGYILSLQRMPSGLSGQAADKPPVLLQHGLMMD GVTWLMNLPDESLAFILADNGYDVWIANSRGTRFSRGHASLHPNDSVYWDWTWDELAAYDLPATFQYVHDQTGQNLHYVGHSQGTLIAFAAFSQEKLLNM LRSAVLLSPIAYLNQMPSPLARGAADIFLAEDLYWLGLHEFVPRGQAANKLLEDICSKPGTNCSDFMTVFTGPNCCLNSSRTNEFLDHEPQSTATKNMIH LAQMIRTGTIAMYDYGNENDNMDHYGQPTPPVYNMTSIPNDLPLFLGYGGKDYLSDVKDVQILLDNLKDHDGDKLVVQYTDEYAHADFVFGVNANQIVYD PLIAFFKIN

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G14180		MPL1	Myzus persicae-induced lipase ...		Potri.014G159900 [exp]	0	1
AT5G08370		ATAGAL2	alpha-galactosidase 2 (.1.2)		Potri.010G118200 [exp]	10.14	0.9714
AT5G14180		MPL1	Myzus persicae-induced lipase ...		Potri.014G159700 [exp]	15.74	0.8802
AT4G18950			Integrin-linked protein kinase...		Potri.017G123100 [exp]	16.49	0.9683
AT2G23970			Class I glutamine amidotransfe...		Potri.018G102000 [exp]	21.72	0.8903
					Potri.014G082000 [exp]	22.11	0.9675
AT5G60060			Protein of unknown function (D...		Potri.002G015700 [exp]	24.49	0.9666
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Potri.008G213223 [exp]	24.57	0.9667
AT1G54630		ACP3	acyl carrier protein 3 (.1.2)		Potri.006G217800 [exp]	31.27	0.9665
AT4G28780			GDSL-like Lipase/Acylhydrolase...		Potri.004G180400 [exp]	32.18	0.9660
AT3G02100			UDP-Glycosyltransferase superf...		Potri.017G091500 [exp]	33.94	0.9654

Compare expression of checked genes

Potri.014G159900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.