Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-ZOG1.11
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05680 411 / 6e-141 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G43840 411 / 7e-141 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT1G05675 409 / 5e-140 UDP-Glycosyltransferase superfamily protein (.1) AT2G43820 405 / 2e-138 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G31750 370 / 8e-125 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT2G31790 361 / 4e-121 UDP-Glycosyltransferase superfamily protein (.1) AT1G24100 349 / 2e-116 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT4G15480 275 / 3e-87 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1) AT4G15490 272 / 4e-86 UGT84A3 UDP-Glycosyltransferase superfamily protein (.1) AT3G21560 267 / 5e-84 UGT84A2 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G032300 [exp] 469 / 2e-163 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G389200 [exp] 466 / 4e-162 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140300 [exp] 462 / 8e-161 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140500 [exp] 462 / 1e-160 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2) Potri.017G032500 [exp] 451 / 2e-156 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.004G179300 [exp] 449 / 1e-155 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 445 / 4e-154 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 445 / 4e-154 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G117200 [exp] 439 / 2e-151 AT2G43840 461 / 1e-160 UDP-glycosyltransferase 74 F1 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008742 [exp] 549 / 0 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006353 [exp] 492 / 4e-172 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10014148 [exp] 477 / 2e-166 AT2G43840 407 / 2e-139 UDP-glycosyltransferase 74 F1 (.1.2) Lus10024486 [exp] 460 / 1e-159 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10017825 [exp] 449 / 2e-155 AT2G43840 392 / 2e-133 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006721 [exp] 432 / 3e-149 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006352 [exp] 432 / 5e-149 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10010712 [exp] 429 / 9e-148 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10009412 [exp] 419 / 6e-144 AT2G43820 474 / 1e-165 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10020556 [exp] 416 / 9e-143 AT2G43820 472 / 1e-164 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [poplar] [flax] GT-B PF00201 [poplar] [flax] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Potri.014G175000.1 pacid=42763806 polypeptide=Potri.014G175000.1.p locus=Potri.014G175000 ID=Potri.014G175000.1.v4.1 annot-version=v4.1 ATGGAGAAGCGCTGTAAAGCTCACTGCTTAGTCGTATCCTTTCCAGCCCAAGGCCACATAAACCCCATGCTTCAATTCTCCAAACGCTTAGAACACAAAG GAGTTAAAGTAACTCCAGTTACTACTCGTTTTATCTCCAACGCCATCATGTCTGGATCATCCTCCAGTTCCATTTCACTCCAAACTATATCTGATGGATA TGATGAAGGAGGTATAGGCCACGCAGAAAGCATCAAGTCATACCTTGATCGCTTTTGGAAGGTGGGATTGCAAACTCTTGACAATCTTGTCGAGAAGCTT AGTGGTTCAGACTGCCCTGTTGATTGCATCATTTATGACGCCTTTATGCCTTGGGGTCTTGATGTAGCCAAGAAATTTGGGTTGGTTGGTGCTGCTTTCT TCACCCAGTCTTGTGCTGTTGATAGCATATACTATCACGTCTATCGAGGGTTGATCAAACTTCCTGTCACGGAGACTCAAATTTTGGTTCCTGGATTGCC TCCTCTAGAGCCTCAAGATTTGCCCTCTTTCATTTATCATTTGGGGACGTACCCAGATTTCTTTGACATGCTTTTGGATCAGTTCTCCAATATTGATAGA GCGGATTGGGTCTTTTGCAACTCATTTTATATGTTGGAAAGAGAGGTGGCAGATTGGTTTGCCAAGCTTTGGCCATTTAGAAGTATTGGACCAACTATAC CGTCTATGTATTTAGATAAACAACTTGAGAACGACAGAGACTATGGTTTCAGCTTCTTCATGCAGAACAATGATGTTTGCATGAATTGGCTTAATGATAG GGCAAAAGGCTCGGTTGTACATGTGTCATTTGGGAGCCTGGTAGATCTCAAAGCAGAGCAAATGGAAGAGCTAGCTTGGGGATTGAAGAGGAGTGATTGT TATTTCTTGTGGGTGGTAAGAGCATCTGAAGAATCTAAAATGTCGAAAGATTTCGCAGAAGAAAGCTCTGCGAAAGGTTTGGTGGTCAGATGGTGTTCAC AGTTGGAGGTTTTAGCTCACGAGGCAGTGGGATGCTTTGTTACACACTGTGGCTGGAACTCTAGCCTGGAGGCTTTGAGTTTAGGAGTCCCAATGGTGGC AATGCCACAACGAACAGATCAAAGCACCAACGCAAAGTACATTACAGATGTTTGGAACATGGGAGTTAAAGCTGCGGTGGATGAGAAAGAGATTGCTAGG CGGGAAACAATAGAGAGTTGCATAAGAGAGATATTGGAGGGGGAGAAAGGGAAGGAGATCAAAAGAAATGCTAGTAAATGGAAGGAACTGGCCAAAGAAG CAGTGGAAGAAGGTGGTAGTTCAGATAAAAACATTGATGAATTTGTGGCTAATTTGGTTCTCTCCCGAAGCTCTTGCTGA
AA sequence Show only first row Show all	>Potri.014G175000.1 pacid=42763806 polypeptide=Potri.014G175000.1.p locus=Potri.014G175000 ID=Potri.014G175000.1.v4.1 annot-version=v4.1 MEKRCKAHCLVVSFPAQGHINPMLQFSKRLEHKGVKVTPVTTRFISNAIMSGSSSSSISLQTISDGYDEGGIGHAESIKSYLDRFWKVGLQTLDNLVEKL SGSDCPVDCIIYDAFMPWGLDVAKKFGLVGAAFFTQSCAVDSIYYHVYRGLIKLPVTETQILVPGLPPLEPQDLPSFIYHLGTYPDFFDMLLDQFSNIDR ADWVFCNSFYMLEREVADWFAKLWPFRSIGPTIPSMYLDKQLENDRDYGFSFFMQNNDVCMNWLNDRAKGSVVHVSFGSLVDLKAEQMEELAWGLKRSDC YFLWVVRASEESKMSKDFAEESSAKGLVVRWCSQLEVLAHEAVGCFVTHCGWNSSLEALSLGVPMVAMPQRTDQSTNAKYITDVWNMGVKAAVDEKEIAR RETIESCIREILEGEKGKEIKRNASKWKELAKEAVEEGGSSDKNIDEFVANLVLSRSSC

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G43840		UGT74F1	UDP-glycosyltransferase 74 F1 ...		Potri.014G175000 [exp]	0	1	Pt-ZOG1.11
AT1G02520		MDR8, ABCB11, P...	multi-drug resistance 8, ATP-b...		Potri.014G113100 [exp]	2.00	0.9709
AT2G45560		CYP76C1	"cytochrome P450, family 76, s...		Potri.012G136600 [exp]	3.46	0.9577	CYP80D1
AT1G75170			Sec14p-like phosphatidylinosit...		Potri.007G025900 [exp]	4.24	0.9581
AT5G57240		ORP4C	OSBP(oxysterol binding protein...		Potri.006G076400 [exp]	5.47	0.9549
AT1G03700			Uncharacterised protein family...		Potri.019G100300 [exp]	5.65	0.9551
AT5G26620			unknown protein		Potri.005G002600 [exp]	5.65	0.9414
AT4G03230			S-locus lectin protein kinase ...		Potri.013G150800 [exp]	6.92	0.9496
AT1G06840			Leucine-rich repeat protein ki...		Potri.013G159200 [exp]	7.21	0.9460
AT5G26620			unknown protein		Potri.005G002500 [exp]	7.74	0.9315
AT3G18170			Glycosyltransferase family 61 ...		Potri.015G042300 [exp]	8.12	0.9524

Compare expression of checked genes

Potri.014G175000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.