Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	MPK8.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G18040 767 / 0 ATMPK9 MAP kinase 9 (.1.2) AT1G73670 766 / 0 ATMPK15 MAP kinase 15 (.1) AT1G18150 759 / 0 ATMPK8 Protein kinase superfamily protein (.1.2.3) AT5G19010 657 / 0 ATMPK16 mitogen-activated protein kinase 16 (.1) AT2G42880 646 / 0 ATMPK20 MAP kinase 20 (.1) AT2G01450 617 / 0 ATMPK17 MAP kinase 17 (.1.2.3.4) AT1G53510 613 / 0 ATMPK18 ARABIDOPSIS THALIANA MAP KINASE 18, mitogen-activated protein kinase 18 (.1) AT3G14720 612 / 0 ATMPK19 ARABIDOPSIS THALIANA MAP KINASE 19, MAP kinase 19 (.1) AT4G01370 311 / 1e-100 ATMPK4 MAP kinase 4 (.1) AT3G45640 301 / 6e-97 ATMAPK3, ATMPK3 mitogen-activated protein kinase 3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G048600 [exp] 957 / 0 AT3G18040 793 / 0.0 MAP kinase 9 (.1.2) Potri.010G029700 [exp] 676 / 0 AT5G19010 921 / 0.0 mitogen-activated protein kinase 16 (.1) Potri.008G200800 [exp] 674 / 0 AT5G19010 922 / 0.0 mitogen-activated protein kinase 16 (.1) Potri.010G112200 [exp] 659 / 0 AT1G73670 687 / 0.0 MAP kinase 15 (.1) Potri.002G059900 [exp] 654 / 0 AT2G42880 897 / 0.0 MAP kinase 20 (.1) Potri.005G201800 [exp] 653 / 0 AT2G42880 904 / 0.0 MAP kinase 20 (.1) Potri.008G130000 [exp] 652 / 0 AT1G73670 697 / 0.0 MAP kinase 15 (.1) Potri.001G381300 [exp] 620 / 0 AT3G14720 875 / 0.0 ARABIDOPSIS THALIANA MAP KINASE 19, MAP kinase 19 (.1) Potri.011G102500 [exp] 619 / 0 AT3G14720 874 / 0.0 ARABIDOPSIS THALIANA MAP KINASE 19, MAP kinase 19 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10038956 [exp] 744 / 0 AT3G18040 817 / 0.0 MAP kinase 9 (.1.2) Lus10027248 [exp] 671 / 0 AT3G18040 741 / 0.0 MAP kinase 9 (.1.2) Lus10041234 [exp] 655 / 0 AT5G19010 911 / 0.0 mitogen-activated protein kinase 16 (.1) Lus10021945 [exp] 642 / 0 AT5G19010 912 / 0.0 mitogen-activated protein kinase 16 (.1) Lus10021784 [exp] 639 / 0 AT1G73670 706 / 0.0 MAP kinase 15 (.1) Lus10013702 [exp] 609 / 0 AT1G53510 845 / 0.0 ARABIDOPSIS THALIANA MAP KINASE 18, mitogen-activated protein kinase 18 (.1) Lus10005568 [exp] 609 / 0 AT1G53510 853 / 0.0 ARABIDOPSIS THALIANA MAP KINASE 18, mitogen-activated protein kinase 18 (.1) Lus10034601 [exp] 537 / 0 AT1G73670 597 / 0.0 MAP kinase 15 (.1) Lus10027091 [exp] 317 / 2e-102 AT2G43790 692 / 0.0 MAP kinase 6 (.1) Lus10018127 [exp] 315 / 2e-102 AT3G45640 652 / 0.0 mitogen-activated protein kinase 3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0016 [poplar] [flax] PKinase PF00069 [poplar] [flax] Pkinase Protein kinase domain
Representative CDS sequence Show only first row Show all	>Potri.015G040300.2 pacid=42775380 polypeptide=Potri.015G040300.2.p locus=Potri.015G040300 ID=Potri.015G040300.2.v4.1 annot-version=v4.1 ATGGGTGGGAGTGGAACGCTAGTGGACGGTATTCGTCGATGGTTTCAACGCCGAACCAACCATAACAATCATGATCACATTAATAATATTAACAAAACTA CTTCTTCTAATGTTAGTAGTAGTGGTTGTCCACAATCATCGGTAAATGTAAAGGAGGGAATAAAGGGGACAGAGGAAGAGCAGCTGACTGTGATTGAGGA TTTTGATATTTCTGATCTTAAACTTATTAGAGTTCCTAAACGCTTCCATTTCCCTCCTGGTTCTACCATGGGTCTTCAGAAGAAGGGCTCGGCAGAGGCA GATTTCTTCACCGAGTATGGAGAGGCTAGTCAATACCAAGTACAAGAAGTCATTGGAAAAGGTAGTTATGGTGTTGTTGGCTCTGCAATTGACTCTCATA CTGGAGAAAGGGTTGCAATCAAGAAGATTAATGATGTTTTTGAGCATGTTTCTGATGCCACACGTATTCTGAGAGAAATTAAACTCCTTCGGTTGCTTCG TCATCCTGATATTGTAGAAATAAAGCATATCATGCTTCCTCCTTCACGCAGGGAATTCAAAGATATCTATGTTGTTTTTGAGTTGATGGAATCTGACCTT CACCAAGTAATTAAGGCAAATGATGATCTTACACCCGAGCATTATCAATTTTTCTTGTACCAGCTTCTTCGTGGTCTTAAATATATACATACAGCAAATG TGTTTCATCGAGATTTAAAGCCAAAAAACATTCTTGCTAATGCCGACTGCAAACTGAAGATATGCGATTTTGGTCTTGCTAGAGTATCTTTCAATGATGC CCCATCAGCTATTCTTTGGACAGACTATGTAGCTACTAGATGGTATCGTGCTCCTGAACTCTGTGGCTCTTTTTTCTCCAAATACACTCCTGCAATTGAT ATTTGGAGCATTGGATGTATATTTGCTGAAATGCTCACAGGAAAACCACTTTTTCCTGGTAAAAACGTGGTTCACCAGTTGGATCTTATGACTGATTTGC TGGGCACTCCACCTCCTGAATCTATTTCAAAGATTCGGAATGAAAAGGCAAGGAGGTATCTTAGTAACATGCGGAAGAAACCACCAGTTCCATTCCCTCA AAAGTTCCCTAATGTAGATCCATTGGCTCTTCGCCTACTGGAGGGCCTGCTTGCATTTGATCCTAAAGATCGTCCGACAGCTGAAGAGGCTTTAGCAAAT CCTTACTTTAATGGTTTGTCAAATGTCGAGTGTGAGCCCTCCACTCAACCTATTTCAAAATTGGAGTTTGAGTTTGAGAGGAGGAAAATAACAAAAGATG ATGTAAGGGAACTGATCTACCGAGAGATACTAGAGTATCACCCGCAGATGCTGAAGGAGTACCTTCGAGGTGGAGAGCAGACAAGCTTTATGTACCCAAG TGGCGTTGATCGATTCAAGCGACAATTTGCACATCTTGAGGAGCACTATGGTAAAGGGGAAAGAAGCACTCCACTCCAAAGACAGCATGCTTCCTTGCCT AGAGAGCGGGTTCCTGCTCCCAAGGATGAGACAGCAGCTCAAAGCACTGATATTGAGAGGCAAACTGCACCATCTATTGCAAAATCTCTTAAAAGTCTCC CAGGATTGCAGCAAGCAGATGGTTCAGAGGATGTGACAGTCGCTGCACAAAATGGATCTAGCAAGCCAAACTACAGTAACCGAAGCCTATTGAAGAGTTC CAGCATCAGTGCCTCCAAATGTGTGGTTGTGAAACCAAAAGGAGATTCAGAAGAGATGATTAAAGAGGTCAGTGATGAGGATGTCAACGACTTGTCTCAG AAGGTTGCAACCTTGTAG
AA sequence Show only first row Show all	>Potri.015G040300.2 pacid=42775380 polypeptide=Potri.015G040300.2.p locus=Potri.015G040300 ID=Potri.015G040300.2.v4.1 annot-version=v4.1 MGGSGTLVDGIRRWFQRRTNHNNHDHINNINKTTSSNVSSSGCPQSSVNVKEGIKGTEEEQLTVIEDFDISDLKLIRVPKRFHFPPGSTMGLQKKGSAEA DFFTEYGEASQYQVQEVIGKGSYGVVGSAIDSHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDL HQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAILWTDYVATRWYRAPELCGSFFSKYTPAID IWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPPESISKIRNEKARRYLSNMRKKPPVPFPQKFPNVDPLALRLLEGLLAFDPKDRPTAEEALAN PYFNGLSNVECEPSTQPISKLEFEFERRKITKDDVRELIYREILEYHPQMLKEYLRGGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLP RERVPAPKDETAAQSTDIERQTAPSIAKSLKSLPGLQQADGSEDVTVAAQNGSSKPNYSNRSLLKSSSISASKCVVVKPKGDSEEMIKEVSDEDVNDLSQ KVATL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G18040		ATMPK9	MAP kinase 9 (.1.2)		Potri.015G040300 [exp]	0	1	MPK8.2
AT5G15470		GAUT14	galacturonosyltransferase 14 (...		Potri.017G090800 [exp]	11.22	0.6201
AT5G59350			unknown protein		Potri.009G029300 [exp]	13.41	0.6735
AT2G32730			26S proteasome regulatory comp...		Potri.001G314300 [exp]	14.69	0.6274
AT3G54170		ATFIP37	FKBP12 interacting protein 37 ...		Potri.002G197600 [exp]	14.83	0.5793	ATFIP37.1
AT2G20810		GAUT10, LGT4	galacturonosyltransferase 10 (...		Potri.019G108900 [exp]	19.33	0.6149
AT1G43850		SEU	SEUSS transcriptional co-regul...		Potri.013G089900 [exp]	26.15	0.6140
AT3G01100		ATHYP1, HYP1	ARABIDOPSIS THALIANA HYPOTHETI...		Potri.004G115800 [exp]	37.46	0.5805	HYP1.1
AT1G48635		PEX3-2, PEX3	PEROXIN 3-2, peroxin 3 (.1.2)		Potri.015G041700 [exp]	38.96	0.6419	PP2.5
AT3G07330		ATCSLC6, ATCSLC...	CELLULOSE-SYNTHASE LIKE C6, Ce...		Potri.002G248400 [exp]	51.57	0.6079	ATCSLC06.4
AT4G09810			Nucleotide-sugar transporter f...		Potri.005G196500 [exp]	58.24	0.6136

Compare expression of checked genes

Potri.015G040300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.