Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G48190 3577 / 0 PIG1, ATATM, ATM pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) AT5G40820 279 / 1e-74 ATATR, ATRAD3, ATR ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) AT1G50030 185 / 3e-46 TOR target of rapamycin (.1.2) AT4G36080 71 / 2e-11 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (.1.2.3) AT2G17930 68 / 1e-10 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) AT5G64070 51 / 2e-05 PI-4KBETA1, PI4KBETA1 phosphatidylinositol 4-OH kinase beta1 (.1) AT5G09350 51 / 2e-05 PI-4KBETA2, PI4KBETA2 phosphatidylinositol 4-OH kinase beta2 (.1) AT1G60490 47 / 0.0002 PI3K, ATVPS34 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G179000 [exp] 239 / 1e-62 AT5G40820 3459 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Potri.001G289200 [exp] 183 / 1e-45 AT1G50030 4080 / 0.0 target of rapamycin (.1.2) Potri.009G084500 [exp] 183 / 1e-45 AT1G50030 4038 / 0.0 target of rapamycin (.1.2) Potri.004G147800 [exp] 167 / 1e-40 AT1G50030 252 / 2e-66 target of rapamycin (.1.2) Potri.005G114300 [exp] 63 / 5e-09 AT2G17930 6266 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.007G057850 [exp] 61 / 1e-08 AT2G17930 1074 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.007G109000 [exp] 53 / 5e-06 AT5G64070 1412 / 0.0 phosphatidylinositol 4-OH kinase beta1 (.1) Potri.005G059000 [exp] 52 / 6e-06 AT5G64070 1497 / 0.0 phosphatidylinositol 4-OH kinase beta1 (.1) Potri.012G075100 [exp] 50 / 2e-05 AT1G60490 1388 / 0.0 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019489 [exp] 3929 / 0 AT3G48190 3373 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10043339 [exp] 373 / 3e-113 AT3G48190 321 / 5e-96 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10000064 [exp] 251 / 2e-76 AT3G48190 248 / 2e-76 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10025091 [exp] 237 / 7e-62 AT5G40820 3033 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10023991 [exp] 234 / 4e-61 AT5G40820 3276 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10037246 [exp] 191 / 8e-48 AT1G50030 4101 / 0.0 target of rapamycin (.1.2) Lus10035661 [exp] 189 / 3e-47 AT1G50030 2590 / 0.0 target of rapamycin (.1.2) Lus10023840 [exp] 170 / 2e-41 AT1G50030 239 / 2e-62 target of rapamycin (.1.2) Lus10043340 [exp] 139 / 5e-38 AT3G48190 137 / 7e-39 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10028458 [exp] 61 / 3e-08 AT2G17930 6325 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0016 [poplar] [flax] PKinase PF00454 [poplar] [flax] PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase CL0020 [poplar] [flax] TPR PF02259 [poplar] [flax] FAT FAT domain CL0020 [poplar] [flax] PF02260 [poplar] [flax] FATC FATC domain
Representative CDS sequence Show only first row Show all	>Potri.015G076650.8 pacid=42775640 polypeptide=Potri.015G076650.8.p locus=Potri.015G076650 ID=Potri.015G076650.8.v4.1 annot-version=v4.1 ATGGTTACTTCGAGAGACGTTCAAGAAGTCGTCTCTAAGCTCTCCTCCGATAAAGCCAAAGCTCGAGAAGAGGGAATAAAGTTGTTGAATACGTGGTTAG AGGGTGGTGAAAGATCGATAAGGTTTTGCAAGTACCTTGGACAGAATACGGCAAAGCTTAAACCGAACGAAATACCTCACTCGGAAACCTGGCCATTTTT AGTCACATTGCTTGTCCAATGTGTGTCATCTGAGATATCTTCCAGCAAACGGAGATTGCCTAAGGCAAGTTTTGCAAAGACTATGCGAATTGTCATTCAA CGAGCAGATGATGCTAAGTTTTCAGGCAAGGCTTTGCCTTTGTTACCCATGGTTAAAATACTCTTTAATCATGTATCGGATGTCCTGAGCAATGTTCCAA GCTTTCAGATGGAATATGGGATTATACTCCGGCATCTATTGGCAGTTGTAGATTATCGTTTTCACTTGAGGAACCGGATTTATTGCAGCCTGGTGCTTCT ATATATAGAGAAGGTGGTTACAAGCTTAGATGGGAATGATAGCAGTCAAGGTAATCCAAAAGAGGAGGTCTTTCGCTGCATACTCACACTCCATTCGCTT TTCGAAAATCCTCCTGGAGATTTCCCTGTTGATGTTCGGGAGGACATAGTTAAGGGGCTTGTTCAGATTTTCTCCTTTGTAAGGGAGGAGGGAAAGATTT CACGCAAACTTATTGAGTGTATAAACACATACTTGTTAAAGGATGGTCCAAATTTGGGCTCCCAGTCTTTGGAGATTCATAACGCTGTGCAGCAATTTGT ATTCCGTTGTTGGCTTACTACCCATGACCGCAGCCTTAAGGATGCTCTTATATTCTATGCAAGGCTGCAGCTAAATCTTTCAAGAGGTGCTACTGATGGA AATTCTCTGGTAGAACAACTTTTGGATCTGGTATGTAAGGAACTAGATCAAAGCAGTTCATCCTGTGGAAGTGCACCTAGGTCGGATGCAACCAAGGATT GCAAGTTTGGAGCTTTGAGTGGTTCACAACGTGGTTTGATAGAACTTGCAGCCCTAGTATTTTATAAGGCATGTGCTAGTACAGCTAAAGCACCATCAAC CGAAAAGCGGGTCAAGAGGGAGCCTGCAGCAGTCCTTTTAAAGGAGGCACTTATGAAAGGAAAATGGCTATGGAATGCTGCATTTTGTTGTCTCATTCGT AACTACTACAATCGCATGAGCAAGGATCTTTTTGTTTACTGGTTTGAAGGCATTTCCACAAGCTTTGAGAGAATATTGAGCGATGCTAATATGGGGCTTG CTTATGATGGTTTGCTGTGGACTTTGCGGAGTTTGCAGGAACTCTCTAGTTTTATGTTGCTTTCAGATGCCCAATCGGAGATTTTATCAAGGCCCTCTCT CCCCTCCAAAGAGTTGGACTGTGGCTGGGAATTGATATGGAGTGGTCTCATTCGTGGGTTGCTGACATTCAGCAATCTAAATTCTGTTGCCGATGCTGCT TTATTGTTACTTGGAAGCATCATATCAAGTGATCTAATGAGCACTTGTGCTGTGCCTCCAGATGTATGGGATCTTAAGTTATTTAAGCGGACTCCATCAA TGTCTGTTTTGTACTTCATTGTGTGCTATTTTTCTCATAAGGGTTCTCAAGGTGACCTTCGTGACTCTTTACATCTCCGGAAGAATCTGTTAAGAGCAAT TTTAGGCTATTTTAATTGGAAGGAGTCCTCCATATTGAATGAGCATGTTGTGCTGTTGTTACCAGCAGCTGTCTATGCTCTTTGTGCTGGTTGTGCTCCT TTCACACATTCTTACAGAGGGTTTTCCTCATCAAACATTCTTGTAGATAGCTTTGAGGCTACAGATGATCGGGTTAAGACAGATGAACATGAACAGGAAA GGCTTTGTGAGCTTTTTGAATGTTCTGTTGAAGTTCTTTCTAAAATTCATTTGGTTTCAAGAGTTGAGGCTTCTTCATTCCAAGGCCATCAAAGTGGCTG TCTTCCTCGACAATTTAGAGATCTGCTGTTGCATGAGATGGAGGGCTATATTCTTGGAGCTGTAGGAGATAAGGAGATGGAAAAGAGGCCTCTATCAGAT GTCTTCTTTATATGCTCTTTATTATCAAATTTTATATATGGCTCAGTATTAACAAGTTTATGCTCGTTCAGGAAAGGAGAAGAGGCTTCACCATTTCTTT CAAAAATGAGTCAATACTTGTTGGAATTGTTGGATCATGCTGTTAATGCAATTCAAGGAAACAGCAATGACCTTCAAGCTCTTGGTTGCTCAGGCTCTAG CTCTGACTATAATTTAAAAACCACTCTTATAGCTTCATTTAGAAGCTTTGTATTCTCTCCTATCTTTGTCAAAAGTAGAGATGAAACTGCTTTGGATGTT GTTCTCTATGATGCAATAACACAATCCATGGGGAGGCTTTTGAAGGAACTGGCTGAACTATACAATCAATTTTCTGAATGTGTAAGAAGCCCTCATTCAG ATCCATCGCTGCCTGATTTACCTTCAACTGATTCTAAGTTACAAATACATGGTCCATCGGGTAGCAACACTAGGATTATGGACATGGAGTTAGATGTGAC TGAGGATACGCAAGATGTGGATATTTTACCTGTTGGTGGGATTATTGGCACTGGTGTATCCTTTTCTGCAGTGAAGTGGAAGTTGGGTATGATATCACTT CTTTCAAGTTTTCATCCAGTTTTAGATTTTGTTACATGGGATGTCCTGTTTGAGCTCATGGAAAATGAAAGTGACAATAAGGTGCGTGAGAATATTCTTT ACCATCTCTGTCAACATTTTCACTGGTCCTCTTCTGCAAAAATTACAGACTTGGTGAAAACAATGAATAGCATGTTTGAGATGCAAGCAAGTGTTAAGCT GGACTGTTCTGGTGTAGTAGTCGCTGCCTGTCAATTGCTAGCTACCTTATTATCCTTAGATGCTTCTGGAAAGGAAGCTGCTCTAACTGCATGGAAAAGA GAATCTGAACTGAGTCTTGTACATCTTGGAGAATTGGTTAACAAAATAGCAGAATTTGGGCTTCTTGACTGGTCAGGGCGTGTTAGGCTTATTGATTGCT TTTGTGATTTTGTCTTACTCAGTCCTCAAATTGGTCAGACAATGATAGAGAGGCTGTTCTTAATGCTTCAAGATCCTGACTATCGAGTTAGGTTTTCACT GGCTCGGCGGATTGGTGTTTTATTCCAAACTTGGGATGGTCACGATGAGCTCTCCCAGGATATTTGTTCAAACTTTGGTGTTGCAATGGTTATTCCCTTA AAAGGAAAAGTTGTTACTGCAAAGGAGGTCCTAGCTTGTGGTCCTCAGCCCACACCAAAAATGGAAACTGTTATTGTTACACTTATGCATCTTGCTTTGC ATAGTGAGAAAATAGAGTTGGAGGCTGTTTTCATGATGTGCGTGATTTCTGCCATTGACCCTGGTCATAGGGAATTGGTGCATGCAGCACTCGACAATCT GTCAAGGCAACTCAACTACGCAACCAGGTTCAAGTACTTGGAGCAGCTACTGGGATCAATACTCTTCTACTGGGTCACTTGCGATGTTAGTTTAGTGGCA CTTGTTGAGATTCGACACCTTTTTGTATCAGATGCTGAACCTAGTTATTTCATGCAATACTGTTGCCACTGGCTTCTTCCAGCATTGGTTCTGAATGAAG ATAGTTCCAACCTGAATTGGGTGGCTAGGGTTGCTTGTCAGCCTTTGGCAGTTCTAGTTAAAATTCACTTTGTGCCAATATTTTCAGTTTGTATTGTGTT GCATTGTAGTAAGAGATCTGGTTGGGAAAGAGGAGCAAAGGTGCTTCAGAGTTCAATTCTGTGTTTGACAGAGCTATCTGAGAGTGAAAGAGACAAGCTC ATAAAGAAACACATGGTATCTATTTTGAGCCATGTTCTGGCCCTTGCCTCTTGTGCACTGGATCCTGCAATCCCTTTCTTTTCCAGAGAAACAGTGGCAC GTGCAATTCAAACAGTTGTGGATGGGTTTCTGGAAATGGAGGATTATCCTACAAATGTTTCTGTGCTTGATAAGATTAACATTTTTCGCCCAGATAGAGT TTTCATGTTTCTAGTGGAAATGCATTACAAAATAGAAGCAGCAGTTCATCATAGGCACAGATGCCATAGGTTGGCTGGAATTGAGGTGCTTGTAGATATC ATTGGGCATAGAGCTTCTGTTTCAAGCACTTTCAAGTATCTTATCAATTTGATTGGACAATTCATTGGTTGTGATGCTTTACAAGATCAATGCTGCCGTG TTATTTCTGCTTTGCTCAACACATTAAAAGACAACCCATCCAAAGACATTGCCAATGTGCTTGGTGAGCAGCTTCAGTTTTTAGTCTCGAAGTTGGTAGC ATGTTGCATTCCCTCTGAAACTTCTGGGGAAATTGGCACTAGAGCATATGAAATCATATCTTTGCTCCGCCAGCTAACTGTGGGCTCTGATCCATCTCTT CATGATTATGTTAGAGAGCTGGAGCCCTTCCCTAAAATAGATATCTTTGATGAGATACGCGAGTTTCATCACCAATTATGCGAAGCTTACTCTCCGAGGG CCCACCTATTGGAGTTCGTCAAGAGATCTTTCTACCTTCCACCAAGATTACTTTTATGCAGTGTTCAAGCACTGCACAAGAAATTACTTATGGGGGAAAG TTTTCAGAGGGGAAGGAATGCGAAAGATGTTATGGAGGATGTGTATTGGCACTGTGACCCTGAAATTGTCCAATCAATCTGGACACTTGTTCGTATGAGT GGTTCCGATGATGCAAGTAGTATCAGACCATTGGTGTCTGATTTTGTGTCCAAGGTTGGCATTGGGGACCCACATTCTGTTGTTTTCCATCTACCTGTAG ACTATGGTCAAATGAAAGTTTGTCAACAATTGAAGATCACCAACCCTTGTGAAGTGAATTTTAACATGGATATTGGTGTATCTGAAGAACTACTGATTGC GCTCTTGAAACTTCTGATGAAGTATCTGATGGATGATTCTGTTAGAATTGTTGATTTGACCTCACAATCTCTTCGGGGAATACTCTCAACTGAAAGAGGT CAAAGAGCTCTGTTGTCATTTGGTTCTTATGAAAGGTCTCTTATTGAGATTCACTCAAAGGGTGTAAATATTGAGCTGGTGGAGAAGTTAGTGCTGGATA TTGGAAAGAGGTATAGAGCTGAAGCAATTTCACTTGAGGAGTCTATAATATGGGAGACATGTAATAAGACCTTCCAAATGTGGATTTGTCCACTTGTGTA TTCATTGATTAGCTACTGCAATGATGTTATTCTAAGATTATGCCAAGATATCGTGTTATTGAAAGCTGAAGTTGCTGAGCTTTTGTTTCCAAGTGTTATC AAAGATCTAGCTTTTCAGAAGGATATTGATGTTGATCTTCATAAAGTAATCTCTTTGCAGGCGCAGGAACATATACTAACAGAGTCTAATGAGTTGATTA AATCAGTTCAAGTCTTCTTGAATGCCCTAAATGAACTTCGGTTATGTCATGTCATGGAAAAATCTTCTTTACGACAATCAAAGCGAGAAAGTACTAAGAA TGCTAAGCCTTCTAACTATGACTCAATATCCCGTTCCACTGCTGTAAAGGCTAGAGATTCAGTAGCTGCATCAAGTTCAATGGTAATGACAACATCTTCC TGGGACAAGGTTTATTGGCTGACAATTGATTATCTTGCTGTTGCCAAATCAGCAGTTATTTGTGGCTCATACTTCACCGCAATGATGTATGTGGAGCATT GGTGTGAAGAGCATTTCAATGGCCTTATGCTAGGGAGCCCAGATTTCTCTCATCTTGAGGTGTTGCCGCATCACATTGAAATACTTATGTCAGCAGTCAC TCATATTAATGAACCTGACAGCTTATATGGGATCATCCAATCACACAAGTTAACCTCTCAAGCTGTTATCTTTGAGCATGAGGGGAACTGGAGTAAGGCG CTTGAATATTATGACTTGCAAATACGTTCAAACCCCCTACTACAAATGGATGGTGGATCGAGTACATTGTCAGCAGGGCATACTCAACTAGGAACTCATC TATCACTTTCTGCATCTGAAGAAGAGATGAGGCAGAGAAAACCTTACAAAGGTCTGATTAGATCTCTGCAGCAGATTGGTTGCACACATGTGCTGGATTT ATATTGCCAGGGATTGACATATAGAAAGGACCAGTTTCATTATGATTTGGAGTTCAATGAATTGCAGTATGAGGCTGCTTGGCGCGCCGGAAACTGGGAT TTATCCTTACATTTTGTGGGAGCTAATTCTCCTTCACGCCCAGATGTTAAATCTGATCATTTCAATGAAAAATTGCATGGTTGTTTGAGGGCATTTCAAG AGGGAGATTTTGATGAATTTCATAGAAAACTGAGAGGCTCAAAGCAGGAGCTTGTGCGCTCTGTCTCTTGTGCAAGTGAGGAGAGCACTGAATACATATA CTCAACAGTAATTAAACTTCAGATTCTTTATCATCTTGGCATGGCATGGCACATCCGTTGGGAAACATCTCAATGTGAAAGGGCAGAATTCTATCCAGGG AAAAGACAAAGGTTTTCAGAACCTGTAATCCCTACCATGGAGCAGTTGTCATGGTTGAATGTGGACTGGAACTCTATTTTGGAACGATCACAGCTGCATA TGAATTTGTTGGAACCATTCATAGCATTCAGGCGAGTTCTGCTTCAAATCTTGAGATGTAACGAGTGTATGACGGAACATCTTTTGCAATCTGCATCCAC TCTTCGTAAGGGCTCTAGGTTTTCTCAATCCACTGCATTTCTGCATGAGTTTAAGCTCGCTAGTGCTGGAACTGGAGAGCAGTACTCAACTTTGTATTGG CTTGGCAGGCTTGAAGAAGCAAAGCTATTGCGTGCCCAAGGTCAGCATGAGATGGCTATCAGCCTTGCAAAATACATATCCCAAAATTGTCACTCAAATC AAGAAGGTTCGGATGTATATCGCTTGGTTGGAAAGTGGCTGGCAGAAACTAGATCTAGCAACTCAAGAACTATTTTAGAGAAGTATCTAAAACCTGCAGT TTCAGTTGCTGAAGCTCACAAGACTACTAACAAGAAGTCCATAGAAAGACAAAGCCAAGCTCATTTTCATCTTGCACACTATGCAGATGCTCTGTTTAAG TCATGCGAGGAAAGACTAACCTCTAGTGAATGGCAAGCAGCAATGCGTTTAAGGAAACACAAGGCAGCTGAGTTGGAAGCACTCGTTAAGCGGCTAAGAA GTTCAACAAAGGGGGAGAAGAATGACTATTCCGTAAAAATACTTGAATTGCAAAGGCAACTTGCAATGGACAAGGAAGAGGCTGAAAAATTGAAGGATGA CAGGGACAATTTTCTCAGCCTAGCTCTGGAAGGATACAAGCGTTGCTTGGTGATAGGTGACAAATATGATGTGAGAGTGGTGTTTCGACTTGTTTCCCTG TGGTTCAGTCTTTCTTTGAGACAAAATGTTATAAATAACATGCTTGACACAATTGATGAGGCTCAATCCTATAAATTTGTACCATTAGTTTATCAAATTG CTTCAAGAATGGGAAGCTCGAAGGACAGTTTGGGACCTCATAATTTTCAGTTTGCTTTGGCTTCTCTTGTGAAGAAAATGGCTATAGACCATCCATACCA TACCATTTTTCAGCTTCTAGCTTTGGCAAATGGTGACCGTATCAAGGACAAACAGCGTAGTAGAAACTCATTTGTGGTGGATGTGGATAAAATAACTGCA GCAAAAAGGCTTCTAGAAGAATTGGCCTCATATCATGGGCCCATTATTAGACAAATGAAACAAATGGTTGAGATCTATATCAAATTAGCCGAGCTGGAAA CAAAGAAAGAGGATACCAACAAAAGGGTTTCACTTCCAAGGGAAATCCGCAGTGTTCGTCAGCTGGAACTTGTACCTGTTGTGACTGCTACCTTCCCAGT TGACCGTGATTGTCATTATCATGAAGGTTCCTTCCCACACTTTAAGGGATTAGCTGATTCGGTTAGGATAATGAATGGTATAAATGCCCCAAAAGTGGTT GAATGCCTTGGTTCTGATGGTCAAAAGTACCGGCAGCTGGCTAAATCTGGAAATGATGACCTAAGACAAGATGCTGTTATGGAACAATTTTTTGGTCTGG TTAACACTTTTCTACAAAATAACAGGGATACATGGAAAAGACGATTAGGTGTGCGTACATACAAGGTTGTTCCTTTCACACCAAGTGCTGGTGTTCTTGA ATGGGTTAATGGCACTTTTCCCCTTGGAGAATATCTCATAGGAAGCGCGAGAAATGGTGGTGCCCATGGTCGCTATGGAGTGGGAGACTGGTCATTTCTC AAATGCCGAGAGCACATGTCAAATGAAAAGGACAAGTGCAAAGCATTCCGTGAAGTTTGTCAGAACTTCAGGCCTGTCATGCATCACTTTTTCTTGGAGA GGTTTTTGCAACCAGCTGACTGGTTTGAGAAGAGACTTGCATACACACGTAGTGTGGCTGCCAGTTCAATGGTGGGTTACATTGTTGGCCTAGGAGACAG ACATTCCATGAATATCCTAATTGATCAAGCTACTGCAGAAGTTGTTCATATAGATCTAGGTGTTGCTTTTGAACAAGGCTTGATGCTGAAGACACCAGAG AGGGTTCCATTCAGACTGACAAGAGACATTGTTGATGGTATGGGTGTTACTGGAGTGGAAGGGGTTTTTAGAAGATGTTGCGAGGAGACTCTCTCTGTTA TGCGAACAAATAAAGAAGCATTGCTGACCATTATTGAAGTTTTTATCCATGACCCACTGTATAAATGGGCTTTATCCCCTCTCAAGGCTTTGCAGCGTCA AAAGGAAACAGATGACGATTTGGAGACTAGCCTGGAAGACTCACAAGATCAACATGAAGGTAACAAGGATGCTGCTCGTGCACTGATGCGTGCAAGGCAA AAACTTGATGGATATGAAGAAGGTGAATTAAGAAGTGTACATGGACAGGTTCAACAACTTATACAAGATGCTATTGATCCTGAGCGTTTATGTCAAATGT TTGCTGGATGGGGAGCTTGGATGTAA
AA sequence Show only first row Show all	>Potri.015G076650.8 pacid=42775640 polypeptide=Potri.015G076650.8.p locus=Potri.015G076650 ID=Potri.015G076650.8.v4.1 annot-version=v4.1 MVTSRDVQEVVSKLSSDKAKAREEGIKLLNTWLEGGERSIRFCKYLGQNTAKLKPNEIPHSETWPFLVTLLVQCVSSEISSSKRRLPKASFAKTMRIVIQ RADDAKFSGKALPLLPMVKILFNHVSDVLSNVPSFQMEYGIILRHLLAVVDYRFHLRNRIYCSLVLLYIEKVVTSLDGNDSSQGNPKEEVFRCILTLHSL FENPPGDFPVDVREDIVKGLVQIFSFVREEGKISRKLIECINTYLLKDGPNLGSQSLEIHNAVQQFVFRCWLTTHDRSLKDALIFYARLQLNLSRGATDG NSLVEQLLDLVCKELDQSSSSCGSAPRSDATKDCKFGALSGSQRGLIELAALVFYKACASTAKAPSTEKRVKREPAAVLLKEALMKGKWLWNAAFCCLIR NYYNRMSKDLFVYWFEGISTSFERILSDANMGLAYDGLLWTLRSLQELSSFMLLSDAQSEILSRPSLPSKELDCGWELIWSGLIRGLLTFSNLNSVADAA LLLLGSIISSDLMSTCAVPPDVWDLKLFKRTPSMSVLYFIVCYFSHKGSQGDLRDSLHLRKNLLRAILGYFNWKESSILNEHVVLLLPAAVYALCAGCAP FTHSYRGFSSSNILVDSFEATDDRVKTDEHEQERLCELFECSVEVLSKIHLVSRVEASSFQGHQSGCLPRQFRDLLLHEMEGYILGAVGDKEMEKRPLSD VFFICSLLSNFIYGSVLTSLCSFRKGEEASPFLSKMSQYLLELLDHAVNAIQGNSNDLQALGCSGSSSDYNLKTTLIASFRSFVFSPIFVKSRDETALDV VLYDAITQSMGRLLKELAELYNQFSECVRSPHSDPSLPDLPSTDSKLQIHGPSGSNTRIMDMELDVTEDTQDVDILPVGGIIGTGVSFSAVKWKLGMISL LSSFHPVLDFVTWDVLFELMENESDNKVRENILYHLCQHFHWSSSAKITDLVKTMNSMFEMQASVKLDCSGVVVAACQLLATLLSLDASGKEAALTAWKR ESELSLVHLGELVNKIAEFGLLDWSGRVRLIDCFCDFVLLSPQIGQTMIERLFLMLQDPDYRVRFSLARRIGVLFQTWDGHDELSQDICSNFGVAMVIPL KGKVVTAKEVLACGPQPTPKMETVIVTLMHLALHSEKIELEAVFMMCVISAIDPGHRELVHAALDNLSRQLNYATRFKYLEQLLGSILFYWVTCDVSLVA LVEIRHLFVSDAEPSYFMQYCCHWLLPALVLNEDSSNLNWVARVACQPLAVLVKIHFVPIFSVCIVLHCSKRSGWERGAKVLQSSILCLTELSESERDKL IKKHMVSILSHVLALASCALDPAIPFFSRETVARAIQTVVDGFLEMEDYPTNVSVLDKINIFRPDRVFMFLVEMHYKIEAAVHHRHRCHRLAGIEVLVDI IGHRASVSSTFKYLINLIGQFIGCDALQDQCCRVISALLNTLKDNPSKDIANVLGEQLQFLVSKLVACCIPSETSGEIGTRAYEIISLLRQLTVGSDPSL HDYVRELEPFPKIDIFDEIREFHHQLCEAYSPRAHLLEFVKRSFYLPPRLLLCSVQALHKKLLMGESFQRGRNAKDVMEDVYWHCDPEIVQSIWTLVRMS GSDDASSIRPLVSDFVSKVGIGDPHSVVFHLPVDYGQMKVCQQLKITNPCEVNFNMDIGVSEELLIALLKLLMKYLMDDSVRIVDLTSQSLRGILSTERG QRALLSFGSYERSLIEIHSKGVNIELVEKLVLDIGKRYRAEAISLEESIIWETCNKTFQMWICPLVYSLISYCNDVILRLCQDIVLLKAEVAELLFPSVI KDLAFQKDIDVDLHKVISLQAQEHILTESNELIKSVQVFLNALNELRLCHVMEKSSLRQSKRESTKNAKPSNYDSISRSTAVKARDSVAASSSMVMTTSS WDKVYWLTIDYLAVAKSAVICGSYFTAMMYVEHWCEEHFNGLMLGSPDFSHLEVLPHHIEILMSAVTHINEPDSLYGIIQSHKLTSQAVIFEHEGNWSKA LEYYDLQIRSNPLLQMDGGSSTLSAGHTQLGTHLSLSASEEEMRQRKPYKGLIRSLQQIGCTHVLDLYCQGLTYRKDQFHYDLEFNELQYEAAWRAGNWD LSLHFVGANSPSRPDVKSDHFNEKLHGCLRAFQEGDFDEFHRKLRGSKQELVRSVSCASEESTEYIYSTVIKLQILYHLGMAWHIRWETSQCERAEFYPG KRQRFSEPVIPTMEQLSWLNVDWNSILERSQLHMNLLEPFIAFRRVLLQILRCNECMTEHLLQSASTLRKGSRFSQSTAFLHEFKLASAGTGEQYSTLYW LGRLEEAKLLRAQGQHEMAISLAKYISQNCHSNQEGSDVYRLVGKWLAETRSSNSRTILEKYLKPAVSVAEAHKTTNKKSIERQSQAHFHLAHYADALFK SCEERLTSSEWQAAMRLRKHKAAELEALVKRLRSSTKGEKNDYSVKILELQRQLAMDKEEAEKLKDDRDNFLSLALEGYKRCLVIGDKYDVRVVFRLVSL WFSLSLRQNVINNMLDTIDEAQSYKFVPLVYQIASRMGSSKDSLGPHNFQFALASLVKKMAIDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDVDKITA AKRLLEELASYHGPIIRQMKQMVEIYIKLAELETKKEDTNKRVSLPREIRSVRQLELVPVVTATFPVDRDCHYHEGSFPHFKGLADSVRIMNGINAPKVV ECLGSDGQKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLQNNRDTWKRRLGVRTYKVVPFTPSAGVLEWVNGTFPLGEYLIGSARNGGAHGRYGVGDWSFL KCREHMSNEKDKCKAFREVCQNFRPVMHHFFLERFLQPADWFEKRLAYTRSVAASSMVGYIVGLGDRHSMNILIDQATAEVVHIDLGVAFEQGLMLKTPE RVPFRLTRDIVDGMGVTGVEGVFRRCCEETLSVMRTNKEALLTIIEVFIHDPLYKWALSPLKALQRQKETDDDLETSLEDSQDQHEGNKDAARALMRARQ KLDGYEEGELRSVHGQVQQLIQDAIDPERLCQMFAGWGAWM

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G48190		PIG1, ATATM, AT...	pcd in male gametogenesis 1, A...		Potri.015G076650 [exp]	0	1
AT1G55350		EMB80, ATDEK1, ...	EMBRYO DEFECTIVE 80, embryo de...		Potri.003G221100 [exp]	1.41	0.8713
AT1G79350		EMB1135	embryo defective 1135, RING/FY...		Potri.010G174900 [exp]	2.00	0.8182
AT5G03280		CKR1, PIR2, ORE...	ORESARA 3, ORESARA 2, ENHANCED...		Potri.016G090800 [exp]	3.46	0.8134
AT5G53430		SET29, ATX5, SD...	SET domain group 29 (.1)		Potri.012G013900 [exp]	5.91	0.7930	SDG914
AT1G67580		CDKG;2	Protein kinase superfamily pro...		Potri.015G092100 [exp]	8.36	0.7701
AT3G14470			NB-ARC domain-containing disea...		Potri.001G261300 [exp]	10.19	0.7725
AT5G13590			unknown protein		Potri.008G047600 [exp]	10.77	0.7557
					Potri.017G065550 [exp]	12.24	0.7536
AT5G49430			WD40/YVTN repeat-like-containi...		Potri.008G106800 [exp]	16.91	0.7578
AT3G18290		BTS, EMB2454	embryo defective 2454, BRUTUS,...		Potri.008G123300 [exp]	17.14	0.7061

Compare expression of checked genes

Potri.015G076650 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.