Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-ZOG1.8
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G15490 184 / 2e-52 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT4G34131 182 / 8e-52 UGT73B3 UDP-glucosyl transferase 73B3 (.1) AT3G11340 180 / 2e-51 UGT76B1 UDP-dependent glycosyltransferase 76B1, UDP-Glycosyltransferase superfamily protein (.1) AT4G34138 179 / 1e-50 UGT73B1 UDP-glucosyl transferase 73B1 (.1) AT3G46670 176 / 1e-49 UGT76E11 UDP-glucosyl transferase 76E11 (.1) AT2G15480 176 / 1e-49 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT2G36800 175 / 4e-49 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT3G50740 172 / 5e-48 UGT72E1 UDP-glucosyl transferase 72E1 (.1) AT2G36770 171 / 1e-47 UDP-Glycosyltransferase superfamily protein (.1) AT4G36770 169 / 4e-47 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G048200 [exp] 783 / 0 AT2G15490 193 / 7e-56 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.006G047200 [exp] 766 / 0 AT2G15490 184 / 2e-52 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303000 [exp] 213 / 3e-63 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303600 [exp] 206 / 1e-60 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G098966 [exp] 196 / 4e-57 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G302400 [exp] 192 / 3e-55 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303700 [exp] 189 / 2e-54 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G303300 [exp] 188 / 5e-54 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.006G272600 [exp] 184 / 2e-52 AT2G15490 300 / 1e-96 UDP-glycosyltransferase 73B4 (.1.2.3)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019835 [exp] 197 / 2e-57 AT2G15480 476 / 3e-165 UDP-glucosyl transferase 73B5 (.1.2) Lus10014084 [exp] 189 / 3e-54 AT2G15490 445 / 2e-153 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10019831 [exp] 188 / 3e-54 AT2G15490 425 / 8e-146 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014079 [exp] 188 / 7e-54 AT4G34131 483 / 3e-168 UDP-glucosyl transferase 73B3 (.1) Lus10019832 [exp] 182 / 1e-51 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014080 [exp] 177 / 2e-51 AT2G15480 330 / 3e-110 UDP-glucosyl transferase 73B5 (.1.2) Lus10029452 [exp] 177 / 5e-50 AT4G01070 582 / 0.0 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10005950 [exp] 177 / 9e-50 AT4G01070 573 / 0.0 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10014083 [exp] 176 / 2e-49 AT4G34131 489 / 2e-170 UDP-glucosyl transferase 73B3 (.1) Lus10039588 [exp] 174 / 7e-49 AT4G01070 419 / 2e-143 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [poplar] [flax] GT-B PF00201 [poplar] [flax] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Potri.016G057300.1 pacid=42810671 polypeptide=Potri.016G057300.1.p locus=Potri.016G057300 ID=Potri.016G057300.1.v4.1 annot-version=v4.1 ATGGCTAACCAACAAGACCCACCAAGCCACGGCATAAATGACCTCACAAAACAAGCACAAGTTGTTGTGGTCATGGTGCCCCTTCCAGCACAAGGCCATC TTAACCAGCTCCTCCAACTCTCTAGGCTCATCCTATCCCACAACATCCCGGTCCACTACGTTGGCGCCACCACCCACAATCGTCAGGCCAAGCAGCGCGT ACACGGTTGGGACCCAAACGCCGCTGCAAATATCCATTTCCATGATATCGAAATCCCTCCTTTTCATTGCCCCCCGCCCGATCCAAAAGCCAAAATCAAA TTCCCTTCTCACTTACAACCAGTCTTCAACGCCTCATCTCAACTTACCGAGCCTGTTTCTATGCTTTTACGTGCACTTTCTTGCAAAGCAAGAAAGGTTA TTGTAATTCATGACTCTTTAATGGGGTCTGTGATTGAAGAAGCTCGTTTCCTCTCGAATGCCGAGTCTTACACTTTCCATAGTGTGTCTGCTTTTGCTAT TTCCTTGTATGAATGGGAACAAGAAGGGAAGCTTATAGAGGAAAATGAGTTGTTTCCACGGGATACTCCTTCTCTAGAAGGGTGTTTTACTGATGAGTTT GCGGATTTCGTTGATTGTCATTATAGTAAGTACCAAAAGTTTAACACTGGCTGTGTTTACAACACTTGCAAATTGGTAGAATCTGCTTATTTGGATTTTC TTGAGAAAGAAACAATTAAGGAAGGCATTAAGCATTGGGCACTAGGGCCTTTCAATCCTGTGACAATACCAGAAAGATCAGAAAGCTCAAAAAAGCAGCA TTTTTGCTTGGAGTGGCTTGATAAACAAGCAAAAAACACGGTAATTTACGTGTCGTTTGGGACGACGACCACCTTCGATGATGAACAAATCAAGGAGCTG GCAATTGGGTTGAGAGAAAGCAAGAAAAAGTTCATATGGGTTCTAAGAGATGGTGATAAAGGAGATGTTTTCAATGGAGAAGAGAGAAGAGCCGAACTTC CAAAAGGGTATGAGAATTCAGTGGATGGGATAGGACTAGTGGTGAGAGACTGGGCACCCCAACTAGAGATTTTAGCTCACCCGGCAACAGGAGGGTTTAT GAGTCATTGTGGATGGAATTCTTGCATGGAAAGCATTAGCATGGGAGTGCCAATTGCAGCTTGGCCTATGCACTCGGATCAACCAAGAAACACAGTTCTA ATAACAGAAGTCCTCAAGATTGGAATTGTCGTTAAGGATTGGGCGCAACGAGATGAGATTGTAACATCTAAGATTGTTGGAAGTGCTGTGAATAGGCTAA TGGCATCAACAGAAGGTGATGAGATGAGAAAGAGAGCAGCAGAAATGGGGGAGTCCGTGCGAGGATCCGTGGCTGAAGGTGGAGTTTCTCGTATGGAGAT GGAATCCTTCATTGCTCATATCACTAGGTAA
AA sequence Show only first row Show all	>Potri.016G057300.1 pacid=42810671 polypeptide=Potri.016G057300.1.p locus=Potri.016G057300 ID=Potri.016G057300.1.v4.1 annot-version=v4.1 MANQQDPPSHGINDLTKQAQVVVVMVPLPAQGHLNQLLQLSRLILSHNIPVHYVGATTHNRQAKQRVHGWDPNAAANIHFHDIEIPPFHCPPPDPKAKIK FPSHLQPVFNASSQLTEPVSMLLRALSCKARKVIVIHDSLMGSVIEEARFLSNAESYTFHSVSAFAISLYEWEQEGKLIEENELFPRDTPSLEGCFTDEF ADFVDCHYSKYQKFNTGCVYNTCKLVESAYLDFLEKETIKEGIKHWALGPFNPVTIPERSESSKKQHFCLEWLDKQAKNTVIYVSFGTTTTFDDEQIKEL AIGLRESKKKFIWVLRDGDKGDVFNGEERRAELPKGYENSVDGIGLVVRDWAPQLEILAHPATGGFMSHCGWNSCMESISMGVPIAAWPMHSDQPRNTVL ITEVLKIGIVVKDWAQRDEIVTSKIVGSAVNRLMASTEGDEMRKRAAEMGESVRGSVAEGGVSRMEMESFIAHITR

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G15490		UGT73B4	UDP-glycosyltransferase 73B4 (...		Potri.016G057300 [exp]	0	1	Pt-ZOG1.8
AT3G58000			VQ motif-containing protein (....		Potri.016G046000 [exp]	13.03	0.8618
AT1G66350	GRAS	RGL1	RGA-like 1 (.1)		Potri.010G143700 [exp]	14.14	0.8626	GRAS75
					Potri.002G070101 [exp]	34.55	0.7953
AT3G21420		LBO1	LATERAL BRANCHING OXIDOREDUCTA...		Potri.010G201000 [exp]	42.04	0.8495
AT1G12740		CYP87A2	"cytochrome P450, family 87, s...		Potri.009G143600 [exp]	54.58	0.8479
AT1G09250	bHLH	bHLH149, AIF4	basic helix-loop-helix (bHLH) ...		Potri.013G007700 [exp]	54.73	0.7922
AT4G12480		PEARLI 1 1, PEA...	EARLY ARABIDOPSIS ALUMINUM IND...		Potri.001G122100 [exp]	56.92	0.8432
AT1G79620			Leucine-rich repeat protein ki...		Potri.013G053001 [exp]	62.80	0.8422
AT3G21360			2-oxoglutarate (2OG) and Fe(II...		Potri.010G131200 [exp]	63.24	0.8420
					Potri.012G066250 [exp]	80.93	0.8351

Compare expression of checked genes

Potri.016G057300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.