Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-ADL2.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G33650 1071 / 0 APEM1, DRP3A, ADL2 ABERRANT PEROXISOME MORPHOLOGY 1, ARABIDOPSIS DYNAMIN-LIKE 2, dynamin-related protein 3A (.1.2) AT2G14120 1036 / 0 DRP3B dynamin related protein (.1.2.3) AT5G42080 284 / 2e-85 RSW9, DRP1A, AG68, ADL1A, ADL1 RADIAL SWELLING 9, DYNAMIN-RELATED PROTEIN 1A, dynamin-like protein (.1.2.3) AT3G60190 280 / 7e-84 ADL1E, ADL4, ADLP2, EDR3, DRP1E ENHANCED DISEASE RESISTANCE 3, DYNAMIN-RELATED PROTEIN 1E, DYNAMIN-LIKE PROTEIN 2, ARABIDOPSIS DYNAMIN-LIKE 4, DYNAMIN-like 1E (.1) AT3G61760 279 / 2e-83 ADL1B DYNAMIN-like 1B (.1) AT1G14830 279 / 2e-83 DRP1C, ADL5, ADL1C DYNAMIN RELATED PROTEIN 1C, ARABIDOPSIS DYNAMIN-LIKE PROTEIN 5, DYNAMIN-like 1C (.1) AT2G44590 275 / 7e-82 ADL1D DYNAMIN-like 1D (.1.2.3) AT1G60500 147 / 2e-36 DRP4C Dynamin related protein 4C (.1) AT1G60530 119 / 1e-29 DRP4A Dynamin related protein 4A (.1) AT1G10290 68 / 3e-11 DRP2A, ADL6 DYNAMIN-RELATED PROTEIN 2A, dynamin-like protein 6 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G118300 [exp] 1457 / 0 AT4G33650 1067 / 0.0 ABERRANT PEROXISOME MORPHOLOGY 1, ARABIDOPSIS DYNAMIN-LIKE 2, dynamin-related protein 3A (.1.2) Potri.012G125300 [exp] 432 / 2e-146 AT2G14120 365 / 3e-121 dynamin related protein (.1.2.3) Potri.003G141000 [exp] 296 / 4e-90 AT5G42080 1115 / 0.0 RADIAL SWELLING 9, DYNAMIN-RELATED PROTEIN 1A, dynamin-like protein (.1.2.3) Potri.002G171200 [exp] 292 / 2e-88 AT3G61760 1090 / 0.0 DYNAMIN-like 1B (.1) Potri.001G090600 [exp] 291 / 3e-88 AT5G42080 1123 / 0.0 RADIAL SWELLING 9, DYNAMIN-RELATED PROTEIN 1A, dynamin-like protein (.1.2.3) Potri.001G147500 [exp] 280 / 1e-83 AT3G60190 976 / 0.0 ENHANCED DISEASE RESISTANCE 3, DYNAMIN-RELATED PROTEIN 1E, DYNAMIN-LIKE PROTEIN 2, ARABIDOPSIS DYNAMIN-LIKE 4, DYNAMIN-like 1E (.1) Potri.014G043600 [exp] 275 / 1e-81 AT3G60190 1042 / 0.0 ENHANCED DISEASE RESISTANCE 3, DYNAMIN-RELATED PROTEIN 1E, DYNAMIN-LIKE PROTEIN 2, ARABIDOPSIS DYNAMIN-LIKE 4, DYNAMIN-like 1E (.1) Potri.002G135100 [exp] 273 / 3e-81 AT3G60190 1027 / 0.0 ENHANCED DISEASE RESISTANCE 3, DYNAMIN-RELATED PROTEIN 1E, DYNAMIN-LIKE PROTEIN 2, ARABIDOPSIS DYNAMIN-LIKE 4, DYNAMIN-like 1E (.1) Potri.010G105900 [exp] 266 / 7e-79 AT1G14830 1100 / 0.0 DYNAMIN RELATED PROTEIN 1C, ARABIDOPSIS DYNAMIN-LIKE PROTEIN 5, DYNAMIN-like 1C (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014041 [exp] 1176 / 0 AT4G33650 1081 / 0.0 ABERRANT PEROXISOME MORPHOLOGY 1, ARABIDOPSIS DYNAMIN-LIKE 2, dynamin-related protein 3A (.1.2) Lus10027906 [exp] 1117 / 0 AT4G33650 1080 / 0.0 ABERRANT PEROXISOME MORPHOLOGY 1, ARABIDOPSIS DYNAMIN-LIKE 2, dynamin-related protein 3A (.1.2) Lus10019875 [exp] 1108 / 0 AT4G33650 1030 / 0.0 ABERRANT PEROXISOME MORPHOLOGY 1, ARABIDOPSIS DYNAMIN-LIKE 2, dynamin-related protein 3A (.1.2) Lus10002407 [exp] 1106 / 0 AT4G33650 1079 / 0.0 ABERRANT PEROXISOME MORPHOLOGY 1, ARABIDOPSIS DYNAMIN-LIKE 2, dynamin-related protein 3A (.1.2) Lus10012076 [exp] 1062 / 0 AT4G33650 1045 / 0.0 ABERRANT PEROXISOME MORPHOLOGY 1, ARABIDOPSIS DYNAMIN-LIKE 2, dynamin-related protein 3A (.1.2) Lus10027905 [exp] 458 / 3e-145 AT1G71240 806 / 0.0 Plant protein of unknown function (DUF639) (.1), Plant protein of unknown function (DUF639) (.2) Lus10023073 [exp] 289 / 7e-87 AT5G42080 1106 / 0.0 RADIAL SWELLING 9, DYNAMIN-RELATED PROTEIN 1A, dynamin-like protein (.1.2.3) Lus10040117 [exp] 289 / 1e-85 AT3G60190 907 / 0.0 ENHANCED DISEASE RESISTANCE 3, DYNAMIN-RELATED PROTEIN 1E, DYNAMIN-LIKE PROTEIN 2, ARABIDOPSIS DYNAMIN-LIKE 4, DYNAMIN-like 1E (.1) Lus10003873 [exp] 281 / 4e-84 AT5G42080 1137 / 0.0 RADIAL SWELLING 9, DYNAMIN-RELATED PROTEIN 1A, dynamin-like protein (.1.2.3) Lus10004007 [exp] 278 / 4e-83 AT3G61760 1099 / 0.0 DYNAMIN-like 1B (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF01031 [poplar] [flax] Dynamin_M Dynamin central region CL0023 [poplar] [flax] P-loop_NTPase PF01926 [poplar] [flax] MMR_HSR1 50S ribosome-binding GTPase CL0023 [poplar] [flax] PF02212 [poplar] [flax] GED Dynamin GTPase effector domain
Representative CDS sequence Show only first row Show all	>Potri.017G041800.1 pacid=42813365 polypeptide=Potri.017G041800.1.p locus=Potri.017G041800 ID=Potri.017G041800.1.v4.1 annot-version=v4.1 ATGGCGGAGGAACCAGGATCGCAGTCGGTACCTTCACAATCGCAACCGCCGCAGTCATCATCGGCGGCGCCGCTAGGATCTTCGGTGATACCGATAGTGA ACAAGTTACAGGATATATTTGCTCAGTTAGGTAGTCAATCGACGATTGAGCTGCCGCAGGTGGCAGTTGTAGGGAGTCAAAGTAGTGGGAAATCGAGTGT TTTGGAAGCACTTGTTGGTAGAGATTTCTTGCCACGTGGAAACGAAATCTGTACGCGGCGGCCGCTGGTTTTGCAGTTATTGCAGACTAAAAGGAAAGGT GATGGCTGTGGTGAAGAGGAGTGGGGAGAGTTCTTGCATTTGCCTGGGAAACGGTTTTATGATTTTTCCGAGATCCGGAGCGAAATTCAGGCCGAGACTG CTAAGGAAGCAGGAGGCAACAAAGGTGTCTCTGACAAGCAAATTCGTTTGAAGATTTTTTCACCTAATGTTCTTGATATCACACTTGTAGATCTACCTGG TATAACAAAGGTTCCTGTGGGTGATCAACCCTCTGATATCGAAGCAAGAATTAGAACTATGATCATGTCATACATTAAAAAACCAAGCTGTCTGATTCTA GCTGTTACAGCAGCAAATTCAGATTTAGCGAACTCAGATGCTCTTCAGATTGCAGGAAATGCAGATCCTGATGGTTATAGAACCATTGGAGTAATTACAA AGTTGGATATTATGGACAGAGGTACTGATGCTCGTAATCTGTTGCTTGGAAAAGTGATTCCGCTTCGACTTGGTTATGTTGGTGTTGTGAATCGTAGTCA AGAGGATATCATGCTTAATCGGAGTATCAAGGATGCACTTGCTGCAGAGGAGAAGTTCTTCCGTAGTCGCCCGGTATATAATGGTCTAGCTGATCGTTGT GGTGTTCCTCAACTGGCAAAGAAGCTGAACCAGATTCTAGTGCAACATATAAAAACAATACTTCCAGGGCTGAAATCACGAATAAGCTCTGCATTGGTTT CTGTTGCAAAAGAACATGCAAGCTATGGAGAAATCACAGAATCAAAGGCTGGTCAAGGAACTCTTATTCTGAACATTCTTTCAAAATATTCTGAAGCATT TTCTTCTATGGTTGAGGGAAGAAATGAAGAAATGTCAAGATCTGAGCTCTCTGGAGGAGCACGAATTCATTATATTTTTCAATCAATATTTGTGAAGAGT TTGGAGGAGGTTGATCCCTGTGAGGACTTGACTGATGCTGACATTCAAACTATCATTCAGAATGCCACTGGGCCTAGAACTCCACTGTTTGTACCAGAGG TGCCATTTGAAGTTCTTGTCAGGAAGCAAATAGCTCGTTTGTTAGATCCAAGCCTTCAGTGTGCCAGGTTTATATATGATGAGTTAATAAAGATTAGTCA TCGCTGTCTAGTGAATGAACTCCAGCGGTTTCCTGTTCTAAGAAAACGCATGGACGAAGTTATTGGAAACTTTTTACGAGATGGTCTTGAACCATCGGAG ACAATGATTGGACACATTATTGAAATGGAGATGGACTACATAAATACCTCCCACCCAAGTTTTATTGGTGGGAGTAAGGCTGTGGAGATCGCACAGCAGC AGATCAAGTCTTCCAAGGTTTCTCTAGCTATGCCCAGGCAAAAAGATGCCCTAGAGCCTGATAAGGCACCAGCTTCTGAAAGGAGTATGAAGACTCGGGC CATTTTGGCCAGACAAGTAAATGGGATCATGCCAGATCAGGGAGTGCGTCCTGTTTCAGAGGTCCCACCTGCTGGGACTGCAAATGTTTCAAGTTGGGGT ATCTCATCAATTTTTGGTGGAGGTGACCATTCTCGAGTTTATGCTAAAGAAAATTCAACAAGCAAGTCATACAATGAACCTGCTCAGAGCATGGAATCCT TTGATCAAAGTATGATTCATTTAAGAGAGCCCCCAACTGTCTTGAGGCCTTCAGAAAGCCATTCAGAGAATGAGTCTATTGAAATTGCAGTCACAAAATT GCTGTTGAAATCATACTATGACATTGTTCGGAAAAATATCGAGGACTCTGTACCAAAAGCAATTATGCACTTTCTGGTAAACCATACAAAGCGTGAACTT CACAATGTCTTCATTAGAAAACTGTACAGGGAGAATCTTTTTGAGGAGATGTTGCAGGAACATGATGAGATAGCGATGAAGAGAAAGCAGACACGAGAAT CACTCCGAGTTCTCCAACAAGCATTTAGGACATTAGATGAATTGCCATTGGAAGCTGAAACTGTTGAAAGAGGATATAGTTTGGGATCTGATTCCACAGG ATTGCCAAAGATCCATGGACTGCCAACATCAACAATGCATGGCGTTGGTTCCAGTGATTCCTACTCAGCTTCTCCTAAGAACCCGAAGTCCCGTAGATCA TCCCACTCAGGGGAGCTACAGCCACATTTATATTCTGATTCTAATGGAAGTGGACGTACTTACATGCCAGGTCTCTATCCAACAGTAGACTTTTAA
AA sequence Show only first row Show all	>Potri.017G041800.1 pacid=42813365 polypeptide=Potri.017G041800.1.p locus=Potri.017G041800 ID=Potri.017G041800.1.v4.1 annot-version=v4.1 MAEEPGSQSVPSQSQPPQSSSAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSSVLEALVGRDFLPRGNEICTRRPLVLQLLQTKRKG DGCGEEEWGEFLHLPGKRFYDFSEIRSEIQAETAKEAGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSDIEARIRTMIMSYIKKPSCLIL AVTAANSDLANSDALQIAGNADPDGYRTIGVITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMLNRSIKDALAAEEKFFRSRPVYNGLADRC GVPQLAKKLNQILVQHIKTILPGLKSRISSALVSVAKEHASYGEITESKAGQGTLILNILSKYSEAFSSMVEGRNEEMSRSELSGGARIHYIFQSIFVKS LEEVDPCEDLTDADIQTIIQNATGPRTPLFVPEVPFEVLVRKQIARLLDPSLQCARFIYDELIKISHRCLVNELQRFPVLRKRMDEVIGNFLRDGLEPSE TMIGHIIEMEMDYINTSHPSFIGGSKAVEIAQQQIKSSKVSLAMPRQKDALEPDKAPASERSMKTRAILARQVNGIMPDQGVRPVSEVPPAGTANVSSWG ISSIFGGGDHSRVYAKENSTSKSYNEPAQSMESFDQSMIHLREPPTVLRPSESHSENESIEIAVTKLLLKSYYDIVRKNIEDSVPKAIMHFLVNHTKREL HNVFIRKLYRENLFEEMLQEHDEIAMKRKQTRESLRVLQQAFRTLDELPLEAETVERGYSLGSDSTGLPKIHGLPTSTMHGVGSSDSYSASPKNPKSRRS SHSGELQPHLYSDSNGSGRTYMPGLYPTVDF

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G33650		APEM1, DRP3A, A...	ABERRANT PEROXISOME MORPHOLOGY...		Potri.017G041800 [exp]	0	1	Pt-ADL2.1
AT2G26560		PLP2, PLAIIA, P...	PATATIN-LIKE PROTEIN 2, phosph...		Potri.007G040300 [exp]	16.24	0.6260
					Potri.003G068350 [exp]	18.30	0.6907
AT2G30110		ATUBA1, MOS5	MODIFIER OF SNC1 5, ubiquitin-...		Potri.009G075700 [exp]	18.33	0.6487
AT3G13224			RNA-binding (RRM/RBD/RNP motif...		Potri.001G370300 [exp]	23.93	0.7173
AT1G35220			unknown protein		Potri.002G100800 [exp]	33.54	0.6134
AT1G32330	HSF	ATHSFA1D	heat shock transcription facto...		Potri.003G095000 [exp]	36.49	0.6884	Pt-ATHSFA1.1
AT2G04305			Magnesium transporter CorA-lik...		Potri.009G079600 [exp]	40.80	0.6211
AT5G24320			Transducin/WD40 repeat-like su...		Potri.005G057600 [exp]	70.97	0.6459
AT5G46210		CUL4, ATCUL4	cullin4 (.1)		Potri.004G132900 [exp]	72.37	0.5602
AT3G61415		ASK21	SKP1-like 21 (.1.2)		Potri.012G143500 [exp]	93.97	0.5880

Compare expression of checked genes

Potri.017G041800 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.