Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G31570 1466 / 0 unknown protein AT1G24460 92 / 8e-18 TNO1 TGN-localized SYP41 interacting protein, unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G052600 [exp] 108 / 7e-23 AT1G24460 1116 / 0.0 TGN-localized SYP41 interacting protein, unknown protein
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020133 [exp] 2009 / 0 AT4G31570 1315 / 0.0 unknown protein Lus10026934 [exp] 776 / 0 AT4G31570 680 / 0.0 unknown protein Lus10011394 [exp] 117 / 7e-26 AT1G24460 415 / 3e-126 TGN-localized SYP41 interacting protein, unknown protein Lus10006450 [exp] 112 / 3e-24 AT1G24460 902 / 0.0 TGN-localized SYP41 interacting protein, unknown protein Lus10036938 [exp] 106 / 3e-22 AT1G24460 838 / 0.0 TGN-localized SYP41 interacting protein, unknown protein Lus10006252 [exp] 103 / 2e-21 AT1G24460 937 / 0.0 TGN-localized SYP41 interacting protein, unknown protein Lus10011393 [exp] 64 / 1e-09 AT1G24460 375 / 7e-112 TGN-localized SYP41 interacting protein, unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Potri.018G008600.6 pacid=42801678 polypeptide=Potri.018G008600.6.p locus=Potri.018G008600 ID=Potri.018G008600.6.v4.1 annot-version=v4.1 ATGGACAAGAACAAGAGCCGTACCGATCTGCTCGCCGCTGGTCGTAAAAAGCTTCAGCAATTTCGCCAGAAGAAGGACAGTAAAGGCAGTAGCAGTAGCC ATGGAAGATCCTCAAAAAAGTCTAGCACGTCGGAGAATCATGAATCTGACGCTGATGAAGCGTTGAGTACTGGAAAAGCAGCAGGATTGAAACAGGTTCA TGAATGGGAAGTTAAATCTCAGAGTGATCCTGATTCGGGAAGGGTAGATTCTTTGGTGTCTTCATCTTCTGGGGCTCCTGATCTTGATCTTGATGTTGTG GCTGTTGATCTGCCTTCAATTCCTCTGACACCTGAAACAAGAGTAGCCGAAACAGCTTTGGATCATGATGCTGGCAGTGCTGCGGAGGAAGGTGGGGCTG ATGAGAATCATATTGATTCCTCAAAACCTGATGAAGGGGAAAGTAGCCAGTCTATTGATGATAAGGCTGCAAGAGTTGTTCCTTTAGGAAGCTCAGATAT TCCAGATTCTGAAGCAAAAACCAAACATGATGATGCATTTGTAAGCGTAGATGTGTCAGCCCCTCATAAATTAATTGATACTATGGATGGCACAACTGTT ACAGGTGAAACAGAGAGCCAAGATGGGGAAGATGGCATGTGGCCATTGCCACCACAAGAAGATACCCCTGATACATCCTCGATACAAGCAAGGGGAAATC AGGAAGCTGATGGTTTGGACTCAAAGCATTTTGGTGGAAGCAGTGATTTAGAGCTTGAAGGAGACAGGAGGCTTTCTTTCTCTGGGCGTGGTGAAATTGC CAAATGTGCTGGAGAGACAGCTTCAGAACAGATCCATGTGGAGGAAGCAGCAGCTTCTCAATCAAAGCAAAGTGATGGGGTAGATGATGCTTCTGTTTCT GCAAGTGCAACTGACATGTCAGATGGGCTAGTGGCATCTACTTTGCCTATTTCGGAGGCCGATGGAAGTGCAGGTGTTATCCATGAAGCCACGAATCAAC ATGGGAAAGTTGTTGATATAGGTCCATCTACTGTAGAAAATGTGGAAATTCCGTCTGGGTATGGATATTGTGGAAATGATGGGGAAAGTGTTCAATCTGA TAGGTTGGTTACAGAAGCATCCAGTCCACAATATTTTCCCGAGGATTCTTTTGTGTTTGTTGCTGAAAGTGACAAAAGGCCTCTTTTAAATAAACTAGCA AGTACATCTGATGGATATGCTATGTCTCCTTTTGATGATTTGGGCCAAGTCACTTTCTTGCAGCTGATAGAGGTTATAAAGGGACTTAATGAAGACGAGT ATAGGTTACTGCTCGAGTCTCGGGGATCAGTTTCTAATGTTGAGTTGGGGACTACCAATTCGTTCTCATCACAAAATGGCTTTCCGGGTTTGTTGGAGAG ACTTGGAGAAGAATTGTTCCTCACAAAGTGCACGAAAGATATCCTTCAATTGCAACTTTCTGAACAGTCTGATCTACAAATAGAGAATGATCACCATTTG CATCAATTGGATGATGAAATATCTGTGCTTCATGCATCACTCAAAGAAGCTCGTGAGAGGGGTAACTCCCTTGCTGAAGAGCTTGCAGAATGCAGATCTG AACTTCAGGCTAGTTTTAGTGGGAGGGAGGAGCTTGAGCAGCAATTTCACAAAGCAAAGGTAGAAGTCGAGGAAGTTTCTGCTAGAGCATACAAGTTGCA GAATAGTCTGGAGATGTCTCAATCAGAATTATTGAGACTATCCAAGGAATTGGCCAACAGCCAGGATTTTGTTGCAGCCTTGCAGGTGGAAGTTGAAAAC TTAAATGGCAATCTTGTTTCCTTGACCGAGGAGAGAAAGATAGTTGAGGAGGGAAAAAATTCTTGTCTCCATGAGAATGAGAAGCTGTTGAATGAATTAG CTGACTGCAAGAGTTTGATAGCAGCTTTGCAGACAGAAAGTTCCAACTTGAGGGGAACTGTTGCTTCAATGACAGATGAGAAAATCAAGCTCAATGGGGA AAAGGAGTACCTTGCTGATTGTCATGATAAGATTTGCCTGGAGTTATCTGATTGTAAGGGTTTGGTGGAAGCTCTACAAGTGGAAAATCTGAAATTAAGT GGGAGCCTTGCCATGGCTACAGAAGAGAGAAAGAAATTTGAAGAGGACATGAGTTATTCAGCCCAGGAGAGAGATAGACTTTCATCTGAGCTTCTTGTCC TTCATGATGAGTTATCTAAAGATCATGCAGAATGCTTGCAATTTGAATCTGAGCTAAAAGAGATGACAATGCGTCTTGAACAACTTACGGAGGAAAATAT ATTTCTTAGCAGCAATCTGGATATACATAAAGTTAAGCTACAAGAAATTGAAGACTTGCAAGCCCAAAAGTCATCCCCGGTTGGCAAAGCTGCGAATCCA GTTGGAAGTTTGGAAACACTGAGCAAGGTTTGGGAGGATGCATCTGATGTTGAGCATGATGGTGAAGCTACCTTTTCAATGTCTGAGAAATCCATGTCTG GTAACTTTGAAGTAGCTCCGCCACTAGCACTGTTGGGGCAGGAAGTCTTTGATGATTCCTTGGGTTTTGTAGCCTTGAAGGGACACCTTGAGGAGGCAGG AAAAGTTATGCTAGGTCTTGAAAAGGAAATTGAAGTGGTGCACTCTCATTCGGTATCACTAATTAGAGCTGGTGGTAAAAGTGCATCTCCTGCAGTGTCA AAACTAATTCAAGCTTTTGAGTCAAAGGGGCAACACGATGAGAATGAGGCAGAGCATGGTTCCATGAAAGAGGATCAATCACCAGCAACAGATCCTTTTG CTTCAATGAAAGAATACACAGGAAATTTGAAGGCAATCCTTAAGCGATTGACTCTAGATGCTGAGAATGCCAGTTTAATGTTCAAGACGGAGAGAGATGA TATAAGCATTGCTAATTGCACTATCAGGGAGCTCAAGTTTCAGGCTGAAGCCCTGAAGGAACACAATGATAATTTGGAAGCAACCAACATCCAACTTGGT GTTCTTTATGAAGCTGTAAAGCAGCATTTGTCTGATTTTAATGAAAAAAACAACAAGCTTGAAGTTCTTTGTGATTCCCTGAGACAACAAGAATTCAGTC TTAAAGCAGAAAATTCTGAGTTTGGCAGAAAACTGAGTGACTGCGAATTGAAAATTGAAGATTTGCAGAGTCAGTTGCATGGTTTACAGAAAAGTTCAGA TGAGAAGGCTTCCGTACTTCATGATGAACTAGCAAAATCCCAAATGGAAGCAGCTGAGAGGGCATTGACAGTTGAGCAGGAATGGAATTCAACCGTTGCC CAGATTATTGAAGCAGTTGATAGGCTAGATGTCTCTACTGGATTTTCGCTCACCTCCACCGCCTCAATGCCCAGTCATGGTTCCTTGGATGTAAGCAGTC ATGTTACTGCCTCTGTTAATGCTGCTACAAATACGATACAGGATCTGAAGGCGAAACTTGAAGCTTCTTCCAGAGACCATGAAACTGCCTCTAACTTATT CAATGGAGTGAGTGAGAAGTGCAATGAGTTGCTTGGAAAAAGTGAGTTGGTTAATGCCACTTTGCATAAGCTGTACTCTGAGCTTAGAAAAATTGTGATT GATTCATGTGGTTATGTGGAAGAAAGTAATTTACAAGATGAGGAATTGCCTGACACTGTAGATTATATTAGATTCAAAGCCCTTTTGGAGAAATTGGAGA ATGCTTTGGCTGAGAGGCTACAACTTCAGTCTGCAAACAAGAAACTTAACTCTGAGTTGATGAGTCAAATAAAAGATATTGAGGAACTGAACAGAAGGTG CCATGATTTTAGTTCCATTCAAAGGCTAATTGAAGATGTTGAGGGTGAAGTGAAACTTGAAGATGGTGGGGCAGACTCAGAGATGACACCTGTTTCCCAT CTGGAGTCATTGGTGTCTTTCCTTGTGCACAAATACAAGGAGGCTAAGGAGCAGGTTAACTCATCTAGAGAAGAGTTTGGTTCTAAGGTACTGGAAATGA CAGAACTGCAGAAGGAGATACATCAGTTAACTGGGTTGACGCTTCAGCATGAGAATGAAATCCTTGTACTTAAGGAGCATGTGACCCAGGCTGAGGAAGC TCTTGTTGCTATGCGATCTGAATGGCAGGAGAAAGTAAGTGAACTCCAACAGTCAGAGCAGAGGGTATCATCCATTAGAGAGAAGCTTAGCATAGCTGTT GCCAAGGGGAAGGGGCTGGTTGTGCAGCGTGACAGTCTCAAGCAGTCCCTGGCAGAGACATCTGGTGAATTGGACAGATGCTCACAGGAGTTACAGCTGA AAGATTCCAGGCTGCATGAAATTGAAGCAAAACTGAAGACCTATTCAGAGGCTGGTGGGCGCGTGGAAGCTCTGGAATCTGAACTTTCATACATCCGCAA CTCAGCTACTGCACTGAGAGAATCTTTTCTTCTAAAAGACTCGGTACTCCAGAGGATAGAGGAGATTTTAGAAGATCTGGATCTGCCAGAGCATTTCCAT TCAAGAGATATAATCGAAAAGGTTGATTGGTTAGCAAGATCAGCAACTGCAAACACTTTACTGCCTACAGATTGGGACCAAAAAAGTTCAGTTGGGGGTT CACATTCTGATACTGGTTTTGTTGTCACAGATACCTGGAAAGAGGATGTACAGTCTGGCTCAAATTCAGGGGATGATTTGAGAAGAAAATATGAGGAGCT TCAAAGTAAGTTTTATGGCTTGGCTGAACAAAATGAAATGCTGGAGCAATCCTTGATGGAAAGGAACAACTTGGTTCAGAGATGGGAAGAACGTTTAGCT AGGATCAATTTGCCTTCCCACTTGCGGTTGGCCGAGCCAGAGGATCGGATTGAGTGGTTAGAAAATGCACTTTCAGAGGCTAGCCATGATAGAAATTCTC TGCTGCAGAAGATTGATGAACTTGAAAATTATTGCAGATCAGTTACTGCAGATTTGGAAGAGTCACAAGATAGAGTATCTCACCTCATTGCTGAGTTGCA GGAGTCATCAAAGAGAGTATCTGACCTTGAGAGAGACCTTCAAGCAGTTATCCTTGAGAGAGAGAACCTTTTTGAAAGATTGGAGATTCTGACTTCTGAT GTTGAGAAACTTTCAGCAAGGACAGTCCAATTTGAACTAGACAATGAAAAACTGCAGAATGAAGCATCTGCTTTGCAGGAGAAATTGGTTGACAAGCTTG GGATTGAGGAGCGTATTCAGAGCATTAATGATGAGATAAGAAGGATGCAGGATTTGGTTTGTGATGCGTTGCAGGATCCTGGTGCAAAAGATTTTATATC TGATGGCAGCAGTACAGAGTGTCTGGAAAGATTACTGAGGAAGCTTGTAGAGAACCACACAACACTTTCTTCTGCAAAATCTGTGCCTGTCGAGGCAGTT GTAGATTACCATGCTAAAGGAACTGATGCCAATTTTATTGAAGGCCAAACTAGAGATATATTGGACTTTGAGGAATCTGATGCAGCTCTTCTGAAGAGAG ATGCATGGGGTAATGAGGAAGAAAATGGGGATTCTCTGAAAAAAGAACTGGAAGAGACTTTGAGTGAACTGGCATGTGTGCAGGAGGAAAGAGACAGAGA CAGAGAGAAGCAGCAGTCTTTGATTTGTGAAGTTGAAGCAAAGGAGAAAAAGATATTGGAGTTACAAGAACTACTGCATCAGGAGGAACAGAAGTCTACT TCTGTGAGAGAGAAGCTGAACGTTGCTGTTAGAAAAGGGAAGTTATTGGTACAACAGCGTGATAGTCTGAAACAAACCATTGAAGAGATGAATGCGGAGT TGGTGCTCTTGAAAACTCAGATTAAGGACAGGGAAAATGCTCTTGCAGACAATGAACAGAAGATGAGAGACTTCGCCACTTACCCTGAAAGGGTGGAAGC CCTTGAAGCTGATAGTTCACTCTTGAGAAATCATTTGGCTGAAACTGAGCACCTTCTGCAGGAGAAAGGGCATACTTTAACCATGATGTTGAATGTTCTC GGAGACGTCGATGTTGGTGCTGAAATTTACAGCAATGATCCAATCGAGAAGTTGGAATACATGGGGAAACTATGCCGTGATTTGCATGCTGCTGTGGCTT CAGCCGAACAAGAATCTAAAAAATCTGGAAGAGCGGCAGAACTGCTGCTTGCTGAATTAAATGAAGTCCAAGACAGGAATGATAGTCTACAAGAGGAGCT GGCTAAAGCCAGTATTGAAATTTCAGAGATCTCCAAGGAGAGGGATACAGCGGAGGCTGCAAAACTGGAAGCTCTTTCACGTCTGGAAAGGTCGTTCACA GTTCATGCACAGGAGAAAAGGAAACAATATTCAGAGCTTGCAGTGTTAAAATCTACGGCAGACAAACTCAGGAAAAGCTTCTCTGATATCAATGATCTAC TGGGTGGTGTTTTCACCATGGAACTGGAATTTCTGCAAAATGTAGAGGCTGGTATGGCATCATGTGTTAAAAGAACAGAAACTAATCCTGCAGTTCATGT TCCACCTTTTAGCAGGGCTGATGGCATTACTTTCAACACTTCAGAAAACATGGACAACTTTTCTGTGGAGTTTTCATCACAATCCAGCATGCCAGATGAT TTTGATGATAATTTTATTATTGAAGTTTGTAATACTGTGCAAGAATTAATGAAAGAAATTGGTGCAGTTAAAGTAATATTAGGCGAACATTCTGGTGCAT TACATAACCAAGCCAGAAATCTATCAAAATTGATCGGGATCCTTCATAGAGAAATGATTTCCCAAAAAGAGTCATTTGAGGCCTTGGAAAAAGAAAATAA GCATATAAAATCAGCAGAAAAGGAAAAGGAAAAGGAAATTGTTGTATTGCTCAGAAACATTAGTTTGCTTTATGAAGCATGCACCAGTTCTATCATGGAA ATTGAAAATAGAAAAGCTGAAGTATCAGGAAATGCTTTGGCTACTGGTGACATGGCAGTGAACTGGAAACCTGCAAGATTCGCTGATGGTGGTGGGCATA ATTTTCCATCTGAGGAGCATTTCAAGACCATGGCAGAAAGATTGTCCGTGGCAGTCAAGGAATTTTTTAGTATAAAAGGTGACATCACAGAGGGTGAAAA GAAAGAAATGAAAGTTATGATATCAAATTTGCAGAAAGAGCTTCAGGAGAAGGACATTCAAAGAGAGAGGATTTGCATGGAGCTAGTTAGTCAAATTAAG GAAGCAGAATCAGCTGTAACAAGCTACTTGCTAGATCTGCAATCTTCAAGAACTCGCATCTATGATTTGGAGAAACAGGTAGATGTGAAGGAAGAGGAGC GGGAATTATTGAAGCAGAGAGTAAAGGAACTTCAAGATGGGCAAGCCATATCAGCAGATTTACAGGAGAGGGTCAGATCGCTGACCGATGTGCTTGCTGC GAAAGAGCAAGAAATTGAAACCCTGATGCAAGCTCTTGATGAGGAAGAGGTCCAGATGGAAGATTTAACTAGCAAAACAAAAGAACTGGAAAAGATTTTG CAGCAAAAGAATTTGGACATTGAGAACCTTGAAGCTTCTCGTGGAAAGGCTCTGAAAAAGCTTTCCATCACTGTGAACAAGTTTGATGAGCTCCATCATT TTTCCGAAAGTCTCCTTGCTGAGGTTGAAAAACTTCAATCACAATTGCAAGAGCGTGATGCTGAAATATCTTTCTTAAGGCAAGAGGTCACTAGGTGCAC CAATGAAGTTCTGGTTGCATCTCAGATGAGCAGCAAGAGAAATTCAGACGACATCCATGAATTGTTGTTGTGGTTGGACACATTGGTTTCTCAAGTCGGG ATGCAAGATGTTAATCTTTATGATAGCAGTATGGCACCTGAGCACAAGGAATTGCTTCAGAAGAAGATTACGAGCATTGTGTCTAAATTGGAGGATCTAC AGGTGGTGGCTCAAAGCAGGGACACATTAGTGCAAACAGAAAGGAATAAAGTAGATGAGTTAACACGTCGAATAGAAACTCTTGAGAGCTCTTTACGTGA GAAAGAATCCCAATTAAATATGCTTGAAGGGGTTGAAGATTTGGGACAGACAACCAACTCAGTCTCAGAAATTGTGGAAGTCGAACCAGTGATCAACAAA TGGGTAGCCCCTGTGCCCTCCAGTTCATCTCAAGTTCGCAATTTGCGCAAAGTCAACAATGATCAAGTTGCTATTGCTATAGATGAGGATCCTGTTGGCA AGAATAGTTTAGAGGATGAAGATGATGATAAAGTTCATGGTTTCAAGTCGCTTACTACATCGAGAATTGTACCGAAGTTTACAAGACCAGTGTCTGACAT GATAGATGGTCTATGGGTTTCTTGTGACCGGGCATTAATGCGTCGGCCTGCCCTACGTCTTTGTATAATTATCTACTGGGCTGTCTTGCATGCACTTCTT GCAACTTTTGCGGTTTAG
AA sequence Show only first row Show all	>Potri.018G008600.6 pacid=42801678 polypeptide=Potri.018G008600.6.p locus=Potri.018G008600 ID=Potri.018G008600.6.v4.1 annot-version=v4.1 MDKNKSRTDLLAAGRKKLQQFRQKKDSKGSSSSHGRSSKKSSTSENHESDADEALSTGKAAGLKQVHEWEVKSQSDPDSGRVDSLVSSSSGAPDLDLDVV AVDLPSIPLTPETRVAETALDHDAGSAAEEGGADENHIDSSKPDEGESSQSIDDKAARVVPLGSSDIPDSEAKTKHDDAFVSVDVSAPHKLIDTMDGTTV TGETESQDGEDGMWPLPPQEDTPDTSSIQARGNQEADGLDSKHFGGSSDLELEGDRRLSFSGRGEIAKCAGETASEQIHVEEAAASQSKQSDGVDDASVS ASATDMSDGLVASTLPISEADGSAGVIHEATNQHGKVVDIGPSTVENVEIPSGYGYCGNDGESVQSDRLVTEASSPQYFPEDSFVFVAESDKRPLLNKLA STSDGYAMSPFDDLGQVTFLQLIEVIKGLNEDEYRLLLESRGSVSNVELGTTNSFSSQNGFPGLLERLGEELFLTKCTKDILQLQLSEQSDLQIENDHHL HQLDDEISVLHASLKEARERGNSLAEELAECRSELQASFSGREELEQQFHKAKVEVEEVSARAYKLQNSLEMSQSELLRLSKELANSQDFVAALQVEVEN LNGNLVSLTEERKIVEEGKNSCLHENEKLLNELADCKSLIAALQTESSNLRGTVASMTDEKIKLNGEKEYLADCHDKICLELSDCKGLVEALQVENLKLS GSLAMATEERKKFEEDMSYSAQERDRLSSELLVLHDELSKDHAECLQFESELKEMTMRLEQLTEENIFLSSNLDIHKVKLQEIEDLQAQKSSPVGKAANP VGSLETLSKVWEDASDVEHDGEATFSMSEKSMSGNFEVAPPLALLGQEVFDDSLGFVALKGHLEEAGKVMLGLEKEIEVVHSHSVSLIRAGGKSASPAVS KLIQAFESKGQHDENEAEHGSMKEDQSPATDPFASMKEYTGNLKAILKRLTLDAENASLMFKTERDDISIANCTIRELKFQAEALKEHNDNLEATNIQLG VLYEAVKQHLSDFNEKNNKLEVLCDSLRQQEFSLKAENSEFGRKLSDCELKIEDLQSQLHGLQKSSDEKASVLHDELAKSQMEAAERALTVEQEWNSTVA QIIEAVDRLDVSTGFSLTSTASMPSHGSLDVSSHVTASVNAATNTIQDLKAKLEASSRDHETASNLFNGVSEKCNELLGKSELVNATLHKLYSELRKIVI DSCGYVEESNLQDEELPDTVDYIRFKALLEKLENALAERLQLQSANKKLNSELMSQIKDIEELNRRCHDFSSIQRLIEDVEGEVKLEDGGADSEMTPVSH LESLVSFLVHKYKEAKEQVNSSREEFGSKVLEMTELQKEIHQLTGLTLQHENEILVLKEHVTQAEEALVAMRSEWQEKVSELQQSEQRVSSIREKLSIAV AKGKGLVVQRDSLKQSLAETSGELDRCSQELQLKDSRLHEIEAKLKTYSEAGGRVEALESELSYIRNSATALRESFLLKDSVLQRIEEILEDLDLPEHFH SRDIIEKVDWLARSATANTLLPTDWDQKSSVGGSHSDTGFVVTDTWKEDVQSGSNSGDDLRRKYEELQSKFYGLAEQNEMLEQSLMERNNLVQRWEERLA RINLPSHLRLAEPEDRIEWLENALSEASHDRNSLLQKIDELENYCRSVTADLEESQDRVSHLIAELQESSKRVSDLERDLQAVILERENLFERLEILTSD VEKLSARTVQFELDNEKLQNEASALQEKLVDKLGIEERIQSINDEIRRMQDLVCDALQDPGAKDFISDGSSTECLERLLRKLVENHTTLSSAKSVPVEAV VDYHAKGTDANFIEGQTRDILDFEESDAALLKRDAWGNEEENGDSLKKELEETLSELACVQEERDRDREKQQSLICEVEAKEKKILELQELLHQEEQKST SVREKLNVAVRKGKLLVQQRDSLKQTIEEMNAELVLLKTQIKDRENALADNEQKMRDFATYPERVEALEADSSLLRNHLAETEHLLQEKGHTLTMMLNVL GDVDVGAEIYSNDPIEKLEYMGKLCRDLHAAVASAEQESKKSGRAAELLLAELNEVQDRNDSLQEELAKASIEISEISKERDTAEAAKLEALSRLERSFT VHAQEKRKQYSELAVLKSTADKLRKSFSDINDLLGGVFTMELEFLQNVEAGMASCVKRTETNPAVHVPPFSRADGITFNTSENMDNFSVEFSSQSSMPDD FDDNFIIEVCNTVQELMKEIGAVKVILGEHSGALHNQARNLSKLIGILHREMISQKESFEALEKENKHIKSAEKEKEKEIVVLLRNISLLYEACTSSIME IENRKAEVSGNALATGDMAVNWKPARFADGGGHNFPSEEHFKTMAERLSVAVKEFFSIKGDITEGEKKEMKVMISNLQKELQEKDIQRERICMELVSQIK EAESAVTSYLLDLQSSRTRIYDLEKQVDVKEEERELLKQRVKELQDGQAISADLQERVRSLTDVLAAKEQEIETLMQALDEEEVQMEDLTSKTKELEKIL QQKNLDIENLEASRGKALKKLSITVNKFDELHHFSESLLAEVEKLQSQLQERDAEISFLRQEVTRCTNEVLVASQMSSKRNSDDIHELLLWLDTLVSQVG MQDVNLYDSSMAPEHKELLQKKITSIVSKLEDLQVVAQSRDTLVQTERNKVDELTRRIETLESSLREKESQLNMLEGVEDLGQTTNSVSEIVEVEPVINK WVAPVPSSSSQVRNLRKVNNDQVAIAIDEDPVGKNSLEDEDDDKVHGFKSLTTSRIVPKFTRPVSDMIDGLWVSCDRALMRRPALRLCIIIYWAVLHALL ATFAV

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G31570			unknown protein		Potri.018G008600 [exp]	0	1
AT5G64070		PI-4KBETA1, PI4...	phosphatidylinositol 4-OH kina...		Potri.007G109000 [exp]	2.64	0.8465
AT5G20490		XI-17, ATXIK, X...	MYOSIN XI-17, MYOSIN XI K, Myo...		Potri.006G145700 [exp]	2.64	0.8841
AT3G14172			unknown protein		Potri.001G164900 [exp]	5.91	0.8505
AT4G19110			Protein kinase superfamily pro...		Potri.003G101600 [exp]	9.05	0.8694
AT5G47490			RGPR-related (.1)		Potri.003G077100 [exp]	11.40	0.8181
AT4G38200			SEC7-like guanine nucleotide e...		Potri.004G208400 [exp]	15.74	0.8527
AT1G48760		PAT4, DELTA-ADR	PROTEIN-AFFECTED TRAFFICKING 4...		Potri.012G055000 [exp]	16.37	0.7880
AT5G57830			Protein of unknown function, D...		Potri.018G103500 [exp]	16.97	0.7790
AT4G22120			ERD (early-responsive to dehyd...		Potri.004G006000 [exp]	17.43	0.8453
AT5G16730			Plant protein of unknown funct...		Potri.019G047600 [exp]	19.89	0.8540

Compare expression of checked genes

Potri.018G008600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.