Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	NMT1.5
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G57020 784 / 0 ATNMT1, NMT1 ARABIDOPSIS THALIANA MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, myristoyl-CoA:protein N-myristoyltransferase (.1) AT2G44175 79 / 1e-17 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G147500 [exp] 850 / 0 AT5G57020 780 / 0.0 ARABIDOPSIS THALIANA MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, myristoyl-CoA:protein N-myristoyltransferase (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021577 [exp] 796 / 0 AT5G57020 752 / 0.0 ARABIDOPSIS THALIANA MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, myristoyl-CoA:protein N-myristoyltransferase (.1) Lus10017156 [exp] 456 / 1e-149 AT5G57030 801 / 0.0 LUTEIN DEFICIENT 2, Lycopene beta/epsilon cyclase protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0257 [poplar] [flax] Acetyltrans PF01233 [poplar] [flax] NMT Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain CL0257 [poplar] [flax] Acetyltrans PF02799 [poplar] [flax] NMT_C Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain
Representative CDS sequence Show only first row Show all	>Potri.018G066200.2 pacid=42801687 polypeptide=Potri.018G066200.2.p locus=Potri.018G066200 ID=Potri.018G066200.2.v4.1 annot-version=v4.1 ATGGCCGATAACAATAACAATTCACCACCTGTGTCTTCGAAAGAAAACCCAGATCATGATTCTGAGACGAACCTAATTGCCAAGGAAGATAGCTCCCTCG CAACTATAGCCCGTAGGTTTCAGGACTCCATTTCCTTAGGCAAGACACACAAGTTCTGGGAAAGTCAACCTGTTGGTCAATTCAAAGACATTGGTGATTC AAGTTTGCCCGAGGGCCCTATTGAGCCTCCAACCCCGCTATCTGAAGTTAAACAAGAACCATACAATCTCCCTACTCAGTATGAATGGACCACCTGTGAC ATGGAGTCCGAGGAGACTTGCAATGAGGTCTATAATCTCTTGAAAAACAACTATGTTGAAGATGATGAGAACATGTTTAGGTTTAATTACTCACAGGAGT TTCTTAGATGGGCTTTGTGTCCCCCGGGTTACTATCCAAGCTGGCACATTGGGGTTCGTGCCAAAGCTTCCCAGAAGCTCGTTGCTTTCATCACAGGTGT CCCTGCAAGGATTCGGGTGCGTGATGAAGTTGTGAAAATGGTTGAGATCAATTTCTTGTGTGTTCATAAGAAGCTTCGGTCGAAGAGACTTGCCCCTGTT ATGATTAAGGAGGTTACTAGGAGGGTTCATTTAGAGAATATTTGGCAAGCAGCATATACTGCTGGCGTGGTTCTTCCAACACCAATAACAACCTGTCAGT ATTGGCACAGGTCTTTGAACCCGAAGAAGCTTATTGATGTTGGCTTTTCAAGGCTTGGTGCAAGGATGACAATGAGTCGGACAATAAAACTCTACAAGTT ACCAGATTCCCCCGCCACCCCTGGATTTAGAAAAATGGAACTTCGTGATGTACCTGCTGTTACAAGGTTGCTAAGAAATTACTTGAGCCAGTTTGTTGTT GCACCTGATTTTGATGAGAATGATGTGGAGCACTGGCTTCTTCCAACTGAGAACGTGGTTGATAGTTACTTGGTTGAGAGTCCAGAGACTCATGAGATCA CTGACTTCTGCAGCTTCTACACGCTTCCATCCTCTATCCTAGGCAACCAGAATTACTTGACGTTGAAAGCTGCCTATTCATATTACAATGTTAGCGTGAA GACTCCATTGCTTCAGTTAATGAATGATGCACTGATTGTTGCCAAGCAGAAGGATTTTGATGTTTTTAATGCATTGGATGTCATGCATAACGAGTCTTTC CTGAAAGAACTGAAATTTGGACCAGGTGATGGGCAACTACACTACTATCTTTACAATTACCGCTTACAGCATGCCTTGAGACCCTCGGAACTGGGGCTTG TCCTCTTATAG
AA sequence Show only first row Show all	>Potri.018G066200.2 pacid=42801687 polypeptide=Potri.018G066200.2.p locus=Potri.018G066200 ID=Potri.018G066200.2.v4.1 annot-version=v4.1 MADNNNNSPPVSSKENPDHDSETNLIAKEDSSLATIARRFQDSISLGKTHKFWESQPVGQFKDIGDSSLPEGPIEPPTPLSEVKQEPYNLPTQYEWTTCD MESEETCNEVYNLLKNNYVEDDENMFRFNYSQEFLRWALCPPGYYPSWHIGVRAKASQKLVAFITGVPARIRVRDEVVKMVEINFLCVHKKLRSKRLAPV MIKEVTRRVHLENIWQAAYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSPATPGFRKMELRDVPAVTRLLRNYLSQFVV APDFDENDVEHWLLPTENVVDSYLVESPETHEITDFCSFYTLPSSILGNQNYLTLKAAYSYYNVSVKTPLLQLMNDALIVAKQKDFDVFNALDVMHNESF LKELKFGPGDGQLHYYLYNYRLQHALRPSELGLVLL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G57020		ATNMT1, NMT1	ARABIDOPSIS THALIANA MYRISTOYL...		Potri.018G066200 [exp]	0	1	NMT1.5
AT1G23170			Protein of unknown function DU...		Potri.010G110500 [exp]	1.41	0.8535
AT1G65290		MTACP2	mitochondrial acyl carrier pro...		Potri.019G055300 [exp]	6.48	0.8253
AT2G40290			Eukaryotic translation initiat...		Potri.008G072500 [exp]	8.12	0.8761	ALPHA.7
AT2G46230			PIN domain-like family protein...		Potri.014G092600 [exp]	12.80	0.7947
AT2G47510		FUM1	fumarase 1 (.1.2)		Potri.002G201300 [exp]	21.33	0.8383	FUM1.1
AT1G22450		ATCOX6B2, COX6B	CYTOCHROME C OXIDASE 6B2, cyto...		Potri.005G162100 [exp]	30.00	0.8435	COX6.2
AT3G15020		mMDH2	mitochondrial malate dehydroge...		Potri.001G376500 [exp]	32.31	0.8410
AT1G34130		STT3B	staurosporin and temperature s...		Potri.015G028300 [exp]	40.21	0.8352
AT5G42150			Glutathione S-transferase fami...		Potri.015G038300 [exp]	48.47	0.8068
AT2G29560		ENOC	cytosolic enolase (.1)		Potri.009G040700 [exp]	52.62	0.8092

Compare expression of checked genes

Potri.018G066200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.