Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	AKT1.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G26650 1194 / 0 AKT1, ATAKT1 K+ transporter 1, K+ transporter 1, K+ transporter 1 (.1) AT2G25600 1031 / 0 AKT6, SPIK Shaker pollen inward K+ channel, Shaker pollen inward K+ channel (.1) AT4G32500 1004 / 0 AKT5 K+ transporter 5, K+ transporter 5, K+ transporter 5 (.1) AT5G46240 602 / 0 KAT1 potassium channel in Arabidopsis thaliana 1 (.1) AT4G18290 594 / 0 KAT2 potassium channel in Arabidopsis thaliana 2 (.1) AT4G22200 578 / 0 AKT3, AKT2/3 potassium transport 2/3 (.1) AT4G32650 461 / 2e-152 AtLKT1, KAT3, ATKC1 A. thaliana low-K+-tolerant 1, ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, potassium channel in Arabidopsis thaliana 3 (.1.2.3) AT5G37500 399 / 6e-126 GORK gated outwardly-rectifying K+ channel, gated outwardly-rectifying K+ channel (.1) AT3G02850 389 / 4e-122 SKOR STELAR K+ outward rectifier, STELAR K+ outward rectifier (.1) AT4G30560 70 / 4e-12 ATCNGC9 cyclic nucleotide gated channel 9 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G031600 [exp] 1118 / 0 AT2G25600 1078 / 0.0 Shaker pollen inward K+ channel, Shaker pollen inward K+ channel (.1) Potri.006G249900 [exp] 1100 / 0 AT2G25600 1065 / 0.0 Shaker pollen inward K+ channel, Shaker pollen inward K+ channel (.1) Potri.006G154600 [exp] 975 / 0 AT2G26650 816 / 0.0 K+ transporter 1, K+ transporter 1, K+ transporter 1 (.1) Potri.004G132200 [exp] 630 / 0 AT5G46240 913 / 0.0 potassium channel in Arabidopsis thaliana 1 (.1) Potri.003G018800 [exp] 611 / 0 AT4G22200 1045 / 0.0 potassium transport 2/3 (.1) Potri.006G245000 [exp] 521 / 2e-175 AT4G32650 752 / 0.0 A. thaliana low-K+-tolerant 1, ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, potassium channel in Arabidopsis thaliana 3 (.1.2.3) Potri.018G035500 [exp] 502 / 7e-168 AT4G32650 777 / 0.0 A. thaliana low-K+-tolerant 1, ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, potassium channel in Arabidopsis thaliana 3 (.1.2.3) Potri.012G124944 [exp] 479 / 4e-159 AT4G32650 734 / 0.0 A. thaliana low-K+-tolerant 1, ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, potassium channel in Arabidopsis thaliana 3 (.1.2.3) Potri.012G043000 [exp] 384 / 4e-120 AT3G02850 1032 / 0.0 STELAR K+ outward rectifier, STELAR K+ outward rectifier (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10043298 [exp] 1301 / 0 AT2G26650 1250 / 0.0 K+ transporter 1, K+ transporter 1, K+ transporter 1 (.1) Lus10019442 [exp] 1297 / 0 AT2G26650 1252 / 0.0 K+ transporter 1, K+ transporter 1, K+ transporter 1 (.1) Lus10033052 [exp] 1254 / 0 AT2G26650 1211 / 0.0 K+ transporter 1, K+ transporter 1, K+ transporter 1 (.1) Lus10002529 [exp] 982 / 0 AT2G25600 1030 / 0.0 Shaker pollen inward K+ channel, Shaker pollen inward K+ channel (.1) Lus10013115 [exp] 975 / 0 AT2G25600 1036 / 0.0 Shaker pollen inward K+ channel, Shaker pollen inward K+ channel (.1) Lus10008082 [exp] 936 / 0 AT2G25600 994 / 0.0 Shaker pollen inward K+ channel, Shaker pollen inward K+ channel (.1) Lus10017766 [exp] 761 / 0 AT2G26650 719 / 0.0 K+ transporter 1, K+ transporter 1, K+ transporter 1 (.1) Lus10042831 [exp] 618 / 0 AT5G46240 825 / 0.0 potassium channel in Arabidopsis thaliana 1 (.1) Lus10028128 [exp] 615 / 0 AT5G46240 827 / 0.0 potassium channel in Arabidopsis thaliana 1 (.1) Lus10019944 [exp] 589 / 0 AT4G22200 1111 / 0.0 potassium transport 2/3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0029 [poplar] [flax] Cupin PF00027 [poplar] [flax] cNMP_binding Cyclic nucleotide-binding domain CL0030 [poplar] [flax] Ion_channel PF07885 [poplar] [flax] Ion_trans_2 Ion channel CL0030 [poplar] [flax] PF11834 [poplar] [flax] KHA KHA, dimerisation domain of potassium ion channel CL0465 [poplar] [flax] Ank PF12796 [poplar] [flax] Ank_2 Ankyrin repeats (3 copies) CL0465 [poplar] [flax] Ank PF13857 [poplar] [flax] Ank_5 Ankyrin repeats (many copies)
Representative CDS sequence Show only first row Show all	>Potri.018G071400.1 pacid=42801860 polypeptide=Potri.018G071400.1.p locus=Potri.018G071400 ID=Potri.018G071400.1.v4.1 annot-version=v4.1 ATGGACACTCTGCTGCGTAACAGAGGTGTCTTCAGGGTTTCAGTATGTGGGCAAGAGGAGTTAGAGCAGCTGTCAAGAGACGGTAGCCATTACAGTCTCT CGACAGGGATTTTGCCTTCACTCGGTGCAAGGAGTAACCGAAGAGTTAAGCTCAATAGGTTCATTATATCGCCTTATGACCGTCGTTACAGAATTTGGGA GACATTTCTCGTTCTTCTGGTCATCTATACAGCTTGGGTATCGCCTTTCGAATTTGGCTTTCTCAAACAACCACAGAGCCCACTCTCCATCTGTGATAAC GTTGTCAATGGATTCTTTGCTGTGGATATTGTTCTAACCTTCTTTGTGGCTTACCTTGACAAAGCCACCTACCTACTCATTGATGATCACAAGAAGATTG CTTGGAAGTATGCATCTTCTTGGTTGGCTTTGGATATCATATCCACAATCCCAACGGAACTAGCACGGAAGATCTCCCCCAAACCATTACAGTCCTATGG CTTCTTCAACATGCTTCGCCTTTGGCGTCTCCGAAGAGTTAGTGCCCTATTTTCTAGATTGGAGAAAGATAGGAACTATAACTATTTTGGGGTTCGATGT GCTAAACTTTTATGTGTCACTCTTTTTGCAGTACACTCTGCTGGATGCTTCTATTATCTTATTGCTGCACGCTATCATGATCCACATAACACCTGGATTG GAGCAGCCCTAGGAGACAATTTCCTAGAGCAGGGTATATGGAGAAGATACGTGACTTCCATTTACTGGTCTATCACTACTCTAACAACTGTGGGCTATGG TGATTTGCATCCTGTGAACACAAGGGAGATGATATTTGACATCTTCTACATGCTCTTCAACCTTGGATTGACAGCATATTTGATTGGAAACATGACGAAC TTGGTTGTGCATGGGACTAGTCGAACTAGAAGATTTAGAGATACCGTACAATCTGCTTCAAGTTTTGCTCAGAGGAACAAGCTGCCTCCTCGCCTACAAG ATCAGATGCTTGCACATTTGTGCTTGAAGTTCAAGACAGATTCAGAGGGACTGCAGCAGCAAGAGACTCTTGATTTCCTTCCAAAAGCCATTCGGTCAAG CATTTCACATTATCTATTCTACTCTCTTGTGGAAAAGGTCTACTTGTTTCAGGGGGTTTCAAATGACTTGCTTTTCCAGTTGGTCTCTGAGATGGAAGCA GAGTATTTTCCTCCCAATGAAGACGTGATCTTGCAGAATGAAGCACCAACAGACTTTTATATACTTGTTACTGGTGCTGTGGAAGTACTTGCTATGAAAA CTGAAGGGGAACAGGTTGTTGGTGGGGCAAAAACCGGTGATATTTGCGGTGAAATTGGAGTACTTTGTTACAGGCCACAGCTCTTCACAGTGCGAACCAA GAGATTGAGCCAACTACTACGAATGAACCGTACTTCATTCTTGAATATTGTTCAGGCAAATGTTGGAGACGGGACCATAATCATGAATAATTTCCTTCAG TATTTGAAAGAACAGAAGGACCCAGTTATGGAGGGAGTATTTGTGGAAACAACCACTATGCTAGCTCATGGTAGAATGGAACTACCTCTCAGTCTGTGCA TTGCAGCCCTAAGGGGAGATGATTTGTTGTTGCATCAGTTGTTGAAACGGGGACTGGATCCAAACGAAGCAGACCACAATGGGAGGTCAGCACTGCATAT AGCAGCGTCCAAAGGAAGTGAAAACTGTGTGCTACTTCTACTGGATTATGGAGTAGATCCTAACTGCCGAGACTCAGAAGGAAATGTACCATTGTGGGAG GCAATGCTGGGAGGTCATGAATCACTGACCAAACTTCTGATAGAAAATGGTGCCAGCATACATCATGGAGAAGTGGGCCATTTTGCTTGCACTGCTGCAG AGCTAAACAACTTGAACTTGCTCGAGGAAATTGTTCAATATGGAGGAGATGTGACAATTCCCAGGGACAATGGGACCACAGCACTGCACGTAGCAGTTAG TGAAGACAACACCGAATTAGTCATATTCCTCTTGGATCAAGGTGCTGATATTGACAAACCAGATGGCCATGGTTGGACTCCAAGGGATCTAGCTGACCAA CAAGGGCACGAAGAAATAAAATTGATTTTCCAAACTCGTAAAGAGGCCAAAAAGCAAACCTTGGTTGCCATTCCTGAGAAGCGGGCACATGGAACTCGAT TTCTTGAGAGACTTACAAGTGAGCCAGCAATTCGGCCAGTGTCCCAAGAAGGTTCATTCCCAGCTACAGATGGATCATTGAGCCAAACCCGTCCGAGGCG AAGAATTAATAATCTTCACAACTCCCTCTTTGGGACGATGTCAGCTGCCCACAAGGGGGAGAAGGACTTGCTGTCCCAAAACAGTCATAATAATCATGGA ACTAGTCATGCTAGAGTGACAATTAGTTGCCCCGAAAAGGGGGAAGTTGCAGGAAAGCTTGTCCTACTTCCAAATAGCTTTCGGGCATTGCTTGAGATGG GTTCTAAGAAATTTAGGATCTCACCTGCCAAAGTAATGAGGAAGGATAGGGCTGAGATTGATGCCATTGAGTTGATTAGAGACGGTGATCATCTTATGTT TGTCGCTGATGGAAGGCAACAGACTAGCAACTAA
AA sequence Show only first row Show all	>Potri.018G071400.1 pacid=42801860 polypeptide=Potri.018G071400.1.p locus=Potri.018G071400 ID=Potri.018G071400.1.v4.1 annot-version=v4.1 MDTLLRNRGVFRVSVCGQEELEQLSRDGSHYSLSTGILPSLGARSNRRVKLNRFIISPYDRRYRIWETFLVLLVIYTAWVSPFEFGFLKQPQSPLSICDN VVNGFFAVDIVLTFFVAYLDKATYLLIDDHKKIAWKYASSWLALDIISTIPTELARKISPKPLQSYGFFNMLRLWRLRRVSALFSRLEKDRNYNYFGVRC AKLLCVTLFAVHSAGCFYYLIAARYHDPHNTWIGAALGDNFLEQGIWRRYVTSIYWSITTLTTVGYGDLHPVNTREMIFDIFYMLFNLGLTAYLIGNMTN LVVHGTSRTRRFRDTVQSASSFAQRNKLPPRLQDQMLAHLCLKFKTDSEGLQQQETLDFLPKAIRSSISHYLFYSLVEKVYLFQGVSNDLLFQLVSEMEA EYFPPNEDVILQNEAPTDFYILVTGAVEVLAMKTEGEQVVGGAKTGDICGEIGVLCYRPQLFTVRTKRLSQLLRMNRTSFLNIVQANVGDGTIIMNNFLQ YLKEQKDPVMEGVFVETTTMLAHGRMELPLSLCIAALRGDDLLLHQLLKRGLDPNEADHNGRSALHIAASKGSENCVLLLLDYGVDPNCRDSEGNVPLWE AMLGGHESLTKLLIENGASIHHGEVGHFACTAAELNNLNLLEEIVQYGGDVTIPRDNGTTALHVAVSEDNTELVIFLLDQGADIDKPDGHGWTPRDLADQ QGHEEIKLIFQTRKEAKKQTLVAIPEKRAHGTRFLERLTSEPAIRPVSQEGSFPATDGSLSQTRPRRRINNLHNSLFGTMSAAHKGEKDLLSQNSHNNHG TSHARVTISCPEKGEVAGKLVLLPNSFRALLEMGSKKFRISPAKVMRKDRAEIDAIELIRDGDHLMFVADGRQQTSN

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G26650		AKT1, ATAKT1	K+ transporter 1, K+ transport...		Potri.018G071400 [exp]	0	1	AKT1.2
AT4G27220			NB-ARC domain-containing disea...		Potri.018G145538 [exp]	13.11	0.7015
AT5G27920			F-box family protein (.1)		Potri.005G022600 [exp]	13.26	0.6756
AT1G14060			GCK domain-containing protein ...		Potri.013G099100 [exp]	13.78	0.6572
AT4G27220			NB-ARC domain-containing disea...		Potri.019G014318 [exp]	22.91	0.6806
AT5G64220	CAMTA		Calmodulin-binding transcripti...		Potri.010G153100 [exp]	32.63	0.6725
AT1G20980	SBP	ATSPL14, SPL1R2...	squamosa promoter binding prot...		Potri.005G258700 [exp]	37.20	0.6788
AT1G67580		CDKG;2	Protein kinase superfamily pro...		Potri.012G094600 [exp]	38.94	0.6287
AT5G36930			Disease resistance protein (TI...		Potri.019G001314 [exp]	43.47	0.6520
AT5G54650		ATFH5, Fh5	FORMIN HOMOLOGY 5, formin homo...		Potri.011G131700 [exp]	44.39	0.6396
AT4G01550	NAC	ANAC069, NTM2	NAC with Transmembrane Motif 2...		Potri.002G181800 [exp]	44.63	0.6738

Compare expression of checked genes

Potri.018G071400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.