Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G26890 3625 / 0 KAM2, GRV2 KATAMARI2, GRAVITROPISM DEFECTIVE 2, DNAJ heat shock N-terminal domain-containing protein (.1) AT5G25530 53 / 2e-06 DNAJ heat shock family protein (.1) AT1G10350 51 / 6e-06 DNAJ heat shock family protein (.1) AT3G62600 48 / 5e-05 ATERDJ3B DNAJ heat shock family protein (.1) AT5G01390 47 / 6e-05 DNAJ heat shock family protein (.1.2.3.4) AT4G28480 47 / 0.0001 DNAJ heat shock family protein (.1.2) AT5G59610 47 / 0.0001 Chaperone DnaJ-domain superfamily protein (.1.2) AT3G47940 47 / 0.0001 DNAJ heat shock family protein (.1) AT2G20560 45 / 0.0004 DNAJ heat shock family protein (.1) AT3G08910 45 / 0.0004 DNAJ heat shock family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G057601 [exp] 54 / 1e-06 AT2G20560 444 / 2e-157 DNAJ heat shock family protein (.1) Potri.006G246700 [exp] 52 / 3e-06 AT5G25530 394 / 1e-137 DNAJ heat shock family protein (.1) Potri.010G035000 [exp] 52 / 4e-06 AT1G10350 429 / 1e-151 DNAJ heat shock family protein (.1) Potri.018G034600 [exp] 51 / 6e-06 AT5G25530 410 / 8e-144 DNAJ heat shock family protein (.1) Potri.008G194000 [exp] 50 / 2e-05 AT1G10350 402 / 4e-141 DNAJ heat shock family protein (.1) Potri.007G136700 [exp] 48 / 6e-05 AT2G20560 416 / 5e-146 DNAJ heat shock family protein (.1) Potri.015G066100 [exp] 47 / 0.0001 AT3G47940 436 / 5e-154 DNAJ heat shock family protein (.1) Potri.017G016100 [exp] 47 / 0.0002 AT2G20560 420 / 7e-148 DNAJ heat shock family protein (.1) Potri.001G072700 [exp] 45 / 0.0005 AT5G59610 254 / 3e-84 Chaperone DnaJ-domain superfamily protein (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017747 [exp] 2233 / 0 AT2G26890 2231 / 0.0 KATAMARI2, GRAVITROPISM DEFECTIVE 2, DNAJ heat shock N-terminal domain-containing protein (.1) Lus10033077 [exp] 2123 / 0 AT2G26890 2123 / 0.0 KATAMARI2, GRAVITROPISM DEFECTIVE 2, DNAJ heat shock N-terminal domain-containing protein (.1) Lus10017748 [exp] 1432 / 0 AT2G26890 1451 / 0.0 KATAMARI2, GRAVITROPISM DEFECTIVE 2, DNAJ heat shock N-terminal domain-containing protein (.1) Lus10033078 [exp] 108 / 7e-27 AT2G26890 120 / 2e-32 KATAMARI2, GRAVITROPISM DEFECTIVE 2, DNAJ heat shock N-terminal domain-containing protein (.1) Lus10020949 [exp] 49 / 3e-05 AT1G28210 407 / 2e-141 DNAJ heat shock family protein (.1.2) Lus10005033 [exp] 49 / 4e-05 AT3G08910 503 / 0.0 DNAJ heat shock family protein (.1) Lus10027803 [exp] 49 / 4e-05 AT3G08910 504 / 0.0 DNAJ heat shock family protein (.1) Lus10021961 [exp] 49 / 4e-05 AT5G25530 468 / 7e-167 DNAJ heat shock family protein (.1) Lus10041254 [exp] 49 / 4e-05 AT5G25530 464 / 2e-165 DNAJ heat shock family protein (.1) Lus10015402 [exp] 49 / 4e-05 AT2G20560 483 / 7e-173 DNAJ heat shock family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0392 [poplar] [flax] Chaperone-J PF00226 [poplar] [flax] DnaJ DnaJ domain CL0673 [poplar] [flax] GYF PF14237 [poplar] [flax] GYF_2 GYF domain 2
Representative CDS sequence Show only first row Show all	>Potri.018G072600.3 pacid=42800482 polypeptide=Potri.018G072600.3.p locus=Potri.018G072600 ID=Potri.018G072600.3.v4.1 annot-version=v4.1 ATGGAATCCGCTTCTTCTTCTTCTTCTTCTTCTTCCATCTCTACCCCTCCTCTTCAAGAAGAGCCTGAGTACCTTGCACGCTACCTGGTGGTAAAACATT CGTGGCGTGGGCGGTACAAGAGGATTCTTTGTATTTCTAATGTTTCGATTATCACCTTAGACCCGAACACGCTCTCCGTAACTAATTCTTACGACGCTGG CGCTGATTTCGAGAGCGCTTCGGCAATTATTGGAAGAGATGAGAATTCTAGTGAGTTTAATTTGAGTGTGAGGACTGATGGTAAAGGTAAATTCAAGGCG ATTAAGTTTTCGTCCAAGTTTAGAGCTAGCATTTTGACTGAGCTGCATCGGATTCGATGGAATAGGCTTGCTCCTGTTGCTGAATTCCCGGTTTTGCATC TCAGGAGAAAGCCTAAAGACTGGGTTCTTTTCAAAATGAAAATTACTTGTGTTGGAGTTGAGCTAATTGAGTTAAAATCTGGAGACCTTCGCTGGTGTTT AGATTTTAGAGACATGAGTTCGCCAGCTATCATGCTTCTTGCTGATGCATATGGAAATAAAGGTGGTGATCATGGAGGTTTTGTTCTCTGCCCTTCATAT GGCAGAAAATCCAAAGCTTTCCAAGCTGCTTCAGGAACCACGAATGCTGCAATTATTTCAAACTTGACTAAAACTGCCAAGTCCACGGTTGGCGTCTCAC TATCTGTGGACAGTTCTCAATCCCTGAGTGCAGAAGAGTATTTAAATCGAAGGGCAAAAGAAGCAGTTGGAGAAAAGGAGACCCCATTTGGGCATTGGTC TGTGACAAGGTTGCGTTCTGCTGCTCATGGAACTTTAAATGTTCCTGGATTGAGTTTGGGAGTTGGTCCAAAAGGGGGACTTGGAGAGCATGGCGATGCT GTCTCTCGCCAGCTCATTTTAACAAAGGGTTCACTCGTTGAAAGGCGCCATGATAACTATGAAGTTGTTATTGTTCGTCCTTTGTCTGCTGTAAGTTCCC TTGTACGATTTGCTGAGGAGCCCCAAATGTTTGCCATTGAGTTCAATGATGGGTGCCCCATCCATGTCTATGCAAGCACGTCTCGGGATAGCTTACTAGC TGCAGTTCGGGATGTGTTGCAAACAGAAGGACAGCGCCCAGTAACTGTATTACCAAGGCTGACAATGCCTGGTCATCGTATTGATCCACCTTGTGGGAGG GTCCATTTACTATCAAGGTCACAACGTCAAATTGCTGATGTGGAAAGTACATCCTTGCATTTGAAACACTTAGCCGCAGCTGCTAAAGATGCTGTAGCTG AAGGTGGTTCAATTCCTGGTTCAAGAGCTAAATTGTGGCGTAGAATAAGGGAGTTCAATGCTTGTATTCCATATAGTGGTGTTCCTATTAACATTGATGT GCATGAGGTAACTTTGATGGCCTTGATCACAATGCTTCCAGCTACACCAAATCTTCCTCCAGAGTCTCCTCCGTTGCCTCCACCTTCTTCTAAAGCAGCT GCAACAGTGATGGGTTTCATTGCTTGTTTACGTAGATTATTGGCTTCAAGAAGTGCAGCTTCACATGTGATGTCTTTTCCTGCTGCTGTTGGAAGAATAA TGGGTTTACTTAGAAATGGTTCTGAGGGCGTTGCTGCTGAAGCTGCAGGGCTGGTCACAGCTCTCATCGGTGGTGGCACTGGAGATGCAAGTTTATTAGC AGATTCTAAAGGAGAGAAACATGCCACTATAATGCATGCAAAATCTGTTTTGTTTGCTCATAATGGTTATGTTGTCATCCTCGTCAACAGATTGAAACCT ATGTCTATATCACCTCTACTGTCAATGGCTGTTGTTGAAGTTCTCGAGGCCATGATATGCGAACCACATGGTGAAACTACTCAATACACAGTTTTTGTTG AATTGTTGCGCCAAGTAGCTGGTTTGCGCCGGCGCTTATTTTCATTGTTTGGGCATCCTGCTGAAAGTGTAAGGGAAATAGTTGCTGTGATCATGCGCAC AATTGCAGAAGAGGATGCAATTGCAGCAGAGTCTATGCGTGATGCTGCTTTACGTGATGGTGCTTTACTGAGGCACTTATCACATGCATTTTTCAGTCCT GCAGGTGAGCGACGTGAAGTTAGTCGACAGCTTGTTGCTCTTTGGGCAGATTCCTATCAACCAGCTCTGGATCTATTATCCAGAGTTTTGCCTCCTGGCC ATGTTGCTTATCTGCACACACGATCTGATGGAGCTCAACTTGAAGAAGACAATCGAGAAGGAACATTGATCAGTAGAAGACAGAGGCGTTTACTTCAGCA GAGGAAAGGTCGTGCTGGGAGAGGAATTGCCTCTCAAGAGCATTCCTTGCCTCCTGTTAATAATTATGAAGTTGGTGATCCCGTGAGGCAGATAAATGCT GGAGCTTTAAGAGGATCAGATAACTATAAAAAATCTTCTCTAGATGCAAATTCTGGACAGTCATCAGCTGCTCATGCCATTGAAAATTTGACTAATGATG TTGCCTCTACAGGATATCCGCAAAATGATCATTCACCTATCATTGCTTCAGCAGATGCACGGATGACCAATATGCACGAGGAGTCAGAACCAAATGCCTC AAATTCAGTTGACTCTGATTCATGTGGGCCTGGTGTTCAGAATACAGACCTTCCAGCTCCTGCACAGGTTGTTGTGAAGAATACACCTGTGGGTTCTGGT CAGCTGCTTTGTAATTGGCATGAATTTTGGCGAGCTTTTAGCCTCGATCATAATCGTGCTGATTTAATCTGGAATGAGCGCACAAGGCAAGAGCTGAGGG AGGCATTGAAGGCTGAGGTTAATAAACTAGATGCTGAGAAGGCGCGATCTGAGGATATTATTCCAGGAGGTGTGACAGCAGATGTGATGGCTGGGCAAGA TAGCACACCACAGATATCTTGGAACTATACTGAGTTTTCTGTCAGTTATCCTAGTTTGTCCAAAGAAGTTTGTGTAGGACAATATTATCTGCGTTTGCTG CTTGACAGTAGCAGCAATGCCAGGGCTCAGGATTTTCCACTGCGTGATCCAGTTGCTTTCTTTAGGGCACTCTACCATCGGTTCTTATGTGATGCAGACA TAGGACTTACAGTAGATGGCACTGTTCCTGATGAATTGGGTGCATCTGATGATTGGTGTGATATGGGAAGATTAGATGGTTTTGGGGGAGGGGGAGGCTC TTCAGTTAGGGAGCTTTGTGCAAGAGCAATGGCAATTGTCTATGAACAGCATTTCAGTACTATAGGTTCTTTTGAGGGTACTGCCCATGTTACAGTTCTC TTGGATAGAACAGATGACAGAGCTTTGAGGCACCGTCTTCTTCTTCTTCTAAAGGTTTTAATGAAGGTTTTATCTAATGTGGAGGCTTGTGTTTTGGTTG GGGGTTGTGTTTTGGCTGTTGATCTTCTGACAGTGGTTCATGAAGCTTCAGAAAGGACTTCTATTCCTTTACAATCTAATTTATTAGCTGCTACCGCTTT CATGGAGCCACTTAAAGAATGGATGTATATTGACAACAATGGCACAGAAATTGGACCCTTGGAGAAGGATGCTATTAGAAGGTGCTGGTCGAAGAAAGAC ATTGATTGGTCAACTAAGTGCTGGGCATCTGGTATGTTAGAGTGGAAGAAATTGCGTGATATCCGTGAACTTCGTTGGGTATTAGCTACTCGTGTTCCTG TCCTCACGTCATTTCAGGTAGGGGATGCAGCATTATCCATATTACATTTCATGGTATCTGCTCATTCAGATCTAGATGATGCTGGAGAAATAGTTACTCC AACCCCAAGGGTTAAGCGGATCTTGTCTAGTCCCCGCTGCCTTCCTCATATTGCACAGGCTATGCTTTCTGGGGAACCGAGTATTGTGGAGGCTGCTGCA GCTTTGCTGAAGGCCATCGTTACCAGAAATCCCAAGGCAATGGTACGTCTTTACAGCACTGGTGCATTTTATTTTTGCCTGGCATACCCTGGATCCAATC TCCTCTCCATCGCACAACTCTTTTATGCGACTCATGTCCATCAAGCATTCCATGGTGGGGAAGAAGCTGCAGTTTCCTCGTCATTGCCTCTTGCAAAACG CAGTGTGTTGGGTGGGCTTTTACCCGAATCCTTGCTGTATGTACTGGAGCGTAGTGGTCCATCTGCATTTGCAGCAGCAATGGTTTCTGATTCTGATACA CCAGAGATTGTCTGGACTCACAAAATGCGTGCTGAAAATTTGATCTGTCAGGTTTTGCAACATCTTGGCGATTTTCCCCATAAATTGTCACAGCACTGTC ATTCTTTATACGACTATGCTCCAATGCCACCAGTGACGTACCCAGAGTTAAGGGATGAAATGTGGTGTCACCGTTATTACCTTCGGAACCTCTGTGATGA GATTCGCTTTCCGAATTGGCCAATTGTTGAACATGTTGAGTTTTTGCAGTCATTACTGGTAATGTGGCGTGAAGAGTTAACACGAAGACCTATGGATATT TCAGAAGAGGAAGCTTGCAGAATATTAGAGATATCCCTGGAAGATGTATCGAATGATGAAGCCAAAATGAAGTATTCTTCTGAGGACACAACTAACATAA CAAAGCAGATTGAGAACATTGATGAAGAAAAGCTCAAGAGGCAATATAGGAAACTAGCAATGAAATACCATCCTGACAAAAATCCTGAGGGGAGGGAGAA GTTTCTTGCTGTGCAAAAAGCTTATGAGCGACTTCAGGCCACAATGCAAGGGTTGCAAGGTCCCCAGCCTTGGAGATTACTACTTTTATTGAAGGGACAA TGTATTTTATACAGACGATATGGAGATGTGCTGGAGCCTTTTAAATATGCTGGCTACCCCATGTTGCTTAATGCTGTTACAGTGGACCAAGATGATAACA ATTTCCTTTCTGCTGATAGAGCTCCTTTACTTGTTGCAGCATCAGAGCTTATTTGGCTGACGTGTGCTTCCTCTTCATTAAATGGTGAGGAGCTTGTAAG GGATGGTGGGATACAACTTGTTGCAACTCTTCTCTGCCGTTGCATGTTTGTAGTACAGCCAACTACTCCTGCAAGTGAACCATCTGCTATTATTGTTACA AATGTGATGCGGACCTTTTCTGTCTTGAGTCGGTTTGAGAGTGCCAGAGCTGAGATGCTTCAATTTTCTGGACTAGTAGAGGATATTGTGCACTGCACTG AACTTGAGCTTGTACCTGAAGCTGTGGATGCTGCGCTCCAGACTATCGCCCATGTTTCCGTGTCCTCTGAATTACAGGATGCCTTGTTAAGGGCTGGCGT GCTTTGGTACCTTTTTCCATTGTTGCTTCAGTATGACTCAACTGCTGAGGACTCTGATAAGACAGAGTCACTTGGTGTAGGTTCTAGTGTTCAAATTGCA AAAAATATGCATGCTGTTAGAGCATCCCAGGCTTTGTCAAGGCTTAGTGGTTTGTGCACAGAAGGGAGCTCAACGCCTTATAATGCAACTGCTGCTGATG CCCTCAGAGCTTTGCTAACTCCTAAGCTCGCAAGCATGCTGAAAGATCAATTACCAAAAGACTTATTGATCAAATTAAACACAAACTTGGAGTCTCCAGA GATTATCTGGAACTCTACAACTCGGGCAGAGCTGCTGAAATTTGTGGATCAGCAACGTGCAAGCCAGGGTCCTGATGGTTCATACGACGTGAAAGATTCA CATGCCTTTTTATACGAGGCACTGTCCAAAGAATTATTTGTTGGCAATGTTTACTTGAGAGTTTATAATGATCAGCCAGACTTTGAGATTAGTGAACCAG AAGCATTCTGTGTTGCTCTAATTGATTTCATATCTTTTCTAGTGAATAATCAATTTTCTAAAGATTCAGATGTTCAGAATATTCTTAATCCAAGCAGCTC ATCCCCTCAAACACCTGAGGTTATAAGTGATACTTCAGATGTATTAGTGAATGGACAACTTGTAACTGATGATTCAATGGCAGTCTCTGATGGAAAATCT ACAGATAAAGGAGAATTGGATCTGGTTAAGAACTTTCAATTTGGATTGACTTCACTAAAGAACATACTGACAAGTTATCCAAATTTGGCGTCTATATTCT CTTCCAAAGAGAAGCTATTTCCTCTCTTTGGGTGCTTTTCTGTTCCTATTGCATCAAAAAGCAATATCCCTCAACTTTGCCTGGCTGTGCTGTCTCTTTT GACAACATATGCTCCTTGCTTGGAGGCTATGGTTGCAGATGGATCTAGCCTTCTTCTCTTACTAGAAATGCTACACTATGCTCCAAGTTGCCGTGAAGGG GCTCTTCATGTTCTATATGCTTTGGCAAGCACTCCAGAACTTGCTTGGGCAGCTGCCAAACATGGTGGAGTGGTGTACATTCTTGAACTTCTGTTGCCTT TGCAAAAAGATATTCCCTTACAACAGAGAGCAGCAGCAGCTTCCTTATTGGGGAAGCTTGTTGGGCAGCCAATGCATGGGCCTAGAGTTGCTATAACACT GGCAAGGTTTCTTCCAGATGGCCTTGTTGCAGTTATCAGGGATGGCCCTGGTGAGGCAGTTGTATCTGCTTTAGAGCAGACAACAGAGACTCCAGAGCTT GTATGGACACCAGCAATGGCGTCATCTTTGTCTGCACAAATTGCTACTATGGCATCAGACTTGTACCGTGAGCAGATGAAAGGTCGTCTTGTTGATTGGG ATGTACCTGAGCAGGCTTCGGGACAGCAAGAAATGAGAGATGAGCCACAGGTTGGTGGAATCTATGTCAGGCTGTTCTTGAAGGATCCCAAATTCCCTCT TAGAAATCCTAAGAGATTCTTGGAAGGGTTACTTGATCAATATTTGTCATCCATTGCTGCCACTCATTACGACACACAAACTGTTGATCCCGAGCTTCCT TTGCTTCTTTCTGCTGCTTTGGTTTCACTACTGCGAGTGCACCCTGCACTTGCTGATCATGTTGGATATCTGGGATATGTGCCAAAACTTGTGGCTGCTG TGGCATATGAAGGAAGAAGAGAAACAATGGCATCGGATGAGGTGAAAAATGGCAACTATGCAGACAAAGCATATGAATCTGATGACGGATCAAGTCCGCC CGCTCAAACTCTTCAAGAACGAGTGCGCCTCAGTTGTTTGCGTGTTCTTCATCAACTTGCAGCGAGTACAACTTGTGCTGAAGCTATGGCAGCAACTAGT GTAGGAACTCCTCAGGTTGTCCCACTTTTGATGAAAGCTATAGGATGGCAAGGTGGAAGCATACTTGCTCTTGAGACATTAAAACGTGTTGTGGCTGCTG GGAATCGTGCCCGGGACGCTCTGGTTGCACAAGGACTTAAGGTTGGTCTTGTTGATGTACTTCTCGGGCTTCTTGACTGGAGGGCTGGGGGAAGAAATGG ACTGTGCTCTCAGATGAAGTGGAATGAATCTGAAGCATCTATTGGCAGAGTGCTAGCAATTGAGGTTTTGCATGCTTTTGCAACAGAAGGAGCACACTGC AATAAAGTGCGTGAGATATTAAATGCTTCTGATGTTTGGAGTGCTTATAAAGACCAGAAACATGATCTCTTCCTTCCTTCAAGTGCCCAGTCGGCCGCAG CAGGAGTTGCAGGTCTCATTGAGAATTCTTCATCAAGACTGACTTATGCCCTTGCAGCTCCTCCACAACCTCCTCAAGGAAGACCACGTGCTCCAAGCCC TTCTGATTCAAATGGAAATCAAGATCAGCTTATATAG
AA sequence Show only first row Show all	>Potri.018G072600.3 pacid=42800482 polypeptide=Potri.018G072600.3.p locus=Potri.018G072600 ID=Potri.018G072600.3.v4.1 annot-version=v4.1 MESASSSSSSSSISTPPLQEEPEYLARYLVVKHSWRGRYKRILCISNVSIITLDPNTLSVTNSYDAGADFESASAIIGRDENSSEFNLSVRTDGKGKFKA IKFSSKFRASILTELHRIRWNRLAPVAEFPVLHLRRKPKDWVLFKMKITCVGVELIELKSGDLRWCLDFRDMSSPAIMLLADAYGNKGGDHGGFVLCPSY GRKSKAFQAASGTTNAAIISNLTKTAKSTVGVSLSVDSSQSLSAEEYLNRRAKEAVGEKETPFGHWSVTRLRSAAHGTLNVPGLSLGVGPKGGLGEHGDA VSRQLILTKGSLVERRHDNYEVVIVRPLSAVSSLVRFAEEPQMFAIEFNDGCPIHVYASTSRDSLLAAVRDVLQTEGQRPVTVLPRLTMPGHRIDPPCGR VHLLSRSQRQIADVESTSLHLKHLAAAAKDAVAEGGSIPGSRAKLWRRIREFNACIPYSGVPINIDVHEVTLMALITMLPATPNLPPESPPLPPPSSKAA ATVMGFIACLRRLLASRSAASHVMSFPAAVGRIMGLLRNGSEGVAAEAAGLVTALIGGGTGDASLLADSKGEKHATIMHAKSVLFAHNGYVVILVNRLKP MSISPLLSMAVVEVLEAMICEPHGETTQYTVFVELLRQVAGLRRRLFSLFGHPAESVREIVAVIMRTIAEEDAIAAESMRDAALRDGALLRHLSHAFFSP AGERREVSRQLVALWADSYQPALDLLSRVLPPGHVAYLHTRSDGAQLEEDNREGTLISRRQRRLLQQRKGRAGRGIASQEHSLPPVNNYEVGDPVRQINA GALRGSDNYKKSSLDANSGQSSAAHAIENLTNDVASTGYPQNDHSPIIASADARMTNMHEESEPNASNSVDSDSCGPGVQNTDLPAPAQVVVKNTPVGSG QLLCNWHEFWRAFSLDHNRADLIWNERTRQELREALKAEVNKLDAEKARSEDIIPGGVTADVMAGQDSTPQISWNYTEFSVSYPSLSKEVCVGQYYLRLL LDSSSNARAQDFPLRDPVAFFRALYHRFLCDADIGLTVDGTVPDELGASDDWCDMGRLDGFGGGGGSSVRELCARAMAIVYEQHFSTIGSFEGTAHVTVL LDRTDDRALRHRLLLLLKVLMKVLSNVEACVLVGGCVLAVDLLTVVHEASERTSIPLQSNLLAATAFMEPLKEWMYIDNNGTEIGPLEKDAIRRCWSKKD IDWSTKCWASGMLEWKKLRDIRELRWVLATRVPVLTSFQVGDAALSILHFMVSAHSDLDDAGEIVTPTPRVKRILSSPRCLPHIAQAMLSGEPSIVEAAA ALLKAIVTRNPKAMVRLYSTGAFYFCLAYPGSNLLSIAQLFYATHVHQAFHGGEEAAVSSSLPLAKRSVLGGLLPESLLYVLERSGPSAFAAAMVSDSDT PEIVWTHKMRAENLICQVLQHLGDFPHKLSQHCHSLYDYAPMPPVTYPELRDEMWCHRYYLRNLCDEIRFPNWPIVEHVEFLQSLLVMWREELTRRPMDI SEEEACRILEISLEDVSNDEAKMKYSSEDTTNITKQIENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQATMQGLQGPQPWRLLLLLKGQ CILYRRYGDVLEPFKYAGYPMLLNAVTVDQDDNNFLSADRAPLLVAASELIWLTCASSSLNGEELVRDGGIQLVATLLCRCMFVVQPTTPASEPSAIIVT NVMRTFSVLSRFESARAEMLQFSGLVEDIVHCTELELVPEAVDAALQTIAHVSVSSELQDALLRAGVLWYLFPLLLQYDSTAEDSDKTESLGVGSSVQIA KNMHAVRASQALSRLSGLCTEGSSTPYNATAADALRALLTPKLASMLKDQLPKDLLIKLNTNLESPEIIWNSTTRAELLKFVDQQRASQGPDGSYDVKDS HAFLYEALSKELFVGNVYLRVYNDQPDFEISEPEAFCVALIDFISFLVNNQFSKDSDVQNILNPSSSSPQTPEVISDTSDVLVNGQLVTDDSMAVSDGKS TDKGELDLVKNFQFGLTSLKNILTSYPNLASIFSSKEKLFPLFGCFSVPIASKSNIPQLCLAVLSLLTTYAPCLEAMVADGSSLLLLLEMLHYAPSCREG ALHVLYALASTPELAWAAAKHGGVVYILELLLPLQKDIPLQQRAAAASLLGKLVGQPMHGPRVAITLARFLPDGLVAVIRDGPGEAVVSALEQTTETPEL VWTPAMASSLSAQIATMASDLYREQMKGRLVDWDVPEQASGQQEMRDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAATHYDTQTVDPELP LLLSAALVSLLRVHPALADHVGYLGYVPKLVAAVAYEGRRETMASDEVKNGNYADKAYESDDGSSPPAQTLQERVRLSCLRVLHQLAASTTCAEAMAATS VGTPQVVPLLMKAIGWQGGSILALETLKRVVAAGNRARDALVAQGLKVGLVDVLLGLLDWRAGGRNGLCSQMKWNESEASIGRVLAIEVLHAFATEGAHC NKVREILNASDVWSAYKDQKHDLFLPSSAQSAAAGVAGLIENSSSRLTYALAAPPQPPQGRPRAPSPSDSNGNQDQLI

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G26890		KAM2, GRV2	KATAMARI2, GRAVITROPISM DEFECT...		Potri.018G072600 [exp]	0	1
AT5G16280			Tetratricopeptide repeat (TPR)...		Potri.016G068800 [exp]	1.41	0.8818
AT5G47490			RGPR-related (.1)		Potri.003G077100 [exp]	2.00	0.8467
AT1G15240			Phox-associated domain;Phox-li...		Potri.001G183100 [exp]	2.44	0.8322
AT4G01290			unknown protein		Potri.014G089200 [exp]	3.31	0.8031
AT5G06120			ARM repeat superfamily protein...		Potri.003G189500 [exp]	4.00	0.8232
AT4G02480			AAA-type ATPase family protein...		Potri.015G094100 [exp]	6.24	0.8010
AT5G27970			ARM repeat superfamily protein...		Potri.013G035100 [exp]	7.74	0.7768
AT3G60860			SEC7-like guanine nucleotide e...		Potri.014G070600 [exp]	8.36	0.8157
AT1G67140		SWEETIE	SWEETIE, HEAT repeat-containin...		Potri.004G101250 [exp]	9.79	0.8027
AT2G38440		ITB1, DIS3, SCA...	IRREGULAR TRICHOME BRANCH1, S...		Potri.006G105800 [exp]	11.48	0.7758	WAVE4.1

Compare expression of checked genes

Potri.018G072600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.