Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G64790 3727 / 0 ILA ILITYHIA (.1.2) AT3G25800 49 / 3e-05 PP2AA2, PR65, PDF1 protein phosphatase 2A subunit A2 (.1.2) AT1G25490 48 / 0.0001 REGA, PR65, EER1, ATBBETABETA, RCN1 ROOTS CURL IN NPA, ENHANCED ETHYLENE RESPONSE 1, ARM repeat superfamily protein (.1) AT1G13320 45 / 0.0005 PR65, PDF2, PP2AA3 protein phosphatase 2A subunit A3 (.1.2.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G229300 [exp] 54 / 3e-06 AT2G02560 1913 / 0.0 HEMIVENATA, CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED 1, cullin-associated and neddylation dissociated (.1.2) Potri.012G062700 [exp] 51 / 1e-05 AT3G25800 1116 / 0.0 protein phosphatase 2A subunit A2 (.1.2) Potri.010G127500 [exp] 49 / 5e-05 AT3G25800 1086 / 0.0 protein phosphatase 2A subunit A2 (.1.2) Potri.008G118500 [exp] 47 / 0.0002 AT3G25800 1115 / 0.0 protein phosphatase 2A subunit A2 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10004767 [exp] 3583 / 0 AT1G64790 3557 / 0.0 ILITYHIA (.1.2) Lus10003101 [exp] 2379 / 0 AT1G64790 2349 / 0.0 ILITYHIA (.1.2) Lus10003102 [exp] 1420 / 0 AT1G64790 1308 / 0.0 ILITYHIA (.1.2) Lus10003747 [exp] 376 / 5e-119 AT1G64790 368 / 2e-117 ILITYHIA (.1.2) Lus10035038 [exp] 48 / 0.0001 AT3G25800 1134 / 0.0 protein phosphatase 2A subunit A2 (.1.2) Lus10021695 [exp] 48 / 0.0002 AT3G25800 1129 / 0.0 protein phosphatase 2A subunit A2 (.1.2) Lus10034299 [exp] 47 / 0.0002 AT3G25800 1102 / 0.0 protein phosphatase 2A subunit A2 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0020 [poplar] [flax] TPR PF12348 [poplar] [flax] CLASP_N CLASP N terminal CL0020 [poplar] [flax] TPR PF13646 [poplar] [flax] HEAT_2 HEAT repeats
Representative CDS sequence Show only first row Show all	>Potri.019G024200.3 pacid=42774715 polypeptide=Potri.019G024200.3.p locus=Potri.019G024200 ID=Potri.019G024200.3.v4.1 annot-version=v4.1 ATGGCGGACTCCCTCACTTCCCTCTCTACCTCTGTCTCCACCTCCTCCACCAAACTCCGCATCCGGATCTTCCGTCACGATGTCGTCTCCCTTCTCGCCA ACGCAGAGATGACAGTCGAACTAGCATCGATGTTAGTGGACACCATTTTCCGGACTCTATTCATATACGATGATCGCCGATCGAGAAAAGCAGTCGATGA TGTGATTATCAAGTCATTAAATGAGGTTATCTTCATGAAAAGTTTCGCCGGCGCGGTTGTTCAGGCAATGGAGAAGCAATTGAAAGTTCAATCACATGTT GGATGTTATAGGCTACTTAACTGGTCCGTTTTGTTGTTAACTAAAAGTCAATTCAGTTCAGTTTCTAAAAATGCAGTTTCTAGAGTAGCTTCTGCGCAGG CTGGATTGGTTAATCTTGTGATGCAACGATCATTTCGGGAGCGAAGAGCCTGCAAAAGGATATTCTTTCACTTGTTTTCACAGTCGCTCGATATTTATAA GATATACATCGAGGAATTAAAGAACGGGCGGGTTGCATATAAAGAAAGTCCGGAGTTAATTCGGTTACTACTTGAGTTTTCGAGTGCATCAAGCTCTCGT TTTGAGCAATGCAAGTCTATATTTATGGATATATACTTGAAAGCGGTTTTGAATGCTAGAGAAAAGCCAGTAAAAGAGCTTAGTGAGTGTTTTTATCCGC TGTTTAGACATTTGTCACATGAGGATTTTCAGAACGTAGTGTTACCGTCATCGGTGAAAATGTTGAAGCGGAACCCTGAGATTGTGTTGGAAGCGGTTGG GGTTCTTTTGGATTCGGTCAGTCTTGATTTGAGCAAGTATGGGATCGAACTTCTTTCAGTAGTATTATCACAGGTTCGGCATGCTGATGAAGGTAGAAGG GTTGGTGCATTGGCTATAGTACGGTGTTTGAGCCAGAAGTCGAGTAATCCTGATGCTTTAGAAGCCATGTTCAATGCTGTTAAAGCCATAATTGGAGGGT CGGAAGGAAGACTGCAATTTCCATATCAACGAACTGGCATGTTCAATGCTGTGCAAGAATTATCACATGCTCCTGATGGAAAATTTTTAAACAGTCTCGT GCTTACAATATGCAGTTTCCTTCTATCTTGCTACAAGGAGGAGGGAAACGAAGAGGTAAAGCTTGCAATTTTGTCAGCCGTTGCTTCTTGGGCAGCACGC TCCGCCGATTCTGTCCAACTGGATTTAGTTTCTTTTATTGCTGCTGGCCTTAAAGAGAAGGAAGTTTTGAGAAGAGGGCATCTTCGATGTCTTCAGGTCA TATGTAAAAATGCTGATGCTGTTTTACAGATATCATCTTTGTTTGGACCACTTGTTCAACTTGTAAAAACTGGTTTCACCAAAGCAGTGCAGCGATTGGA TGGGGTATATGCTTTGCTTGTTGTTGGGAAGATAGCTTCTACAGATATCAAAACAGAGGAGACTCTAGCAAAGGAAAAGATATGGTCTTTCATATCTCAA AATGAACCTTCCCTTGTTCCAATTTCTTTGGCCTCAAAATTGTCGAATGAGGATTGCATGGCATGTGTTGATCTTCTTGAGGTGCTGCTAGTGGAACATT CACGCAGGGTGTTGGAAGCTTTTTCAGTGAAATTACTGTTCCAGTTGATGGTCTTCTTACTATGCCATCCAAGTTGGGATGTTAGAAAGATGTCATATGT TGCTACCAGAAAGATAATTACTGCTATCCCGTTGTTATCTGAACTTCTTTTACTGGAGTTCACAAATTTTCTTTCAGTAGTTGGAGAGAGACTCTCTCTT TTGGGGACAAGTGATTCAGATAATTCATTGGACGCCCAAGTTGCATTTCTTCCATCTGTTGAGGTATTAGTGAAGGCTTTAGCAGTAATATCATGTGCAA CTCTGGCTGCTTCTCCAAGTGTATCTACACAAGTCATATTCTGTTCGCATCACCCATGTATGGTTGGCACTGCAAAAAGAGATGTGGTTTGGAAGAGGCT CCGTAAGTGTTTGCGAAGACTTGGGATCGATGTTATTGGCATTGTTTCTGCTGATGTTGAGAATTTGTGCAAGGGTCTACTAGGACCAATGGGATTGGCA AGTTTGAATCCGCTAGAACAGGAAGCAGCAATATATTCTCTATCAACTTTGATGTCCATAACACCAAGAGATATGTATTTGGCATTTGAAAAGCAATTGA AAAATCATCCAGACCGTTATGCACATGATATGCTTTCAGAGAGTGATATTCGGATTTTTCATACCCCTGAAGGAATGCTTTCTAGTGAGCAAGGCGTTTA TGTTGCAGAATCTGTTGCTTCTAAGAACACAAGACAGGCGAAGGGCCGTTTTCGGATGTACGAGGACCACAATGACATGGATGATGTCAATTCTAATCAG TTTGTGAAGAGAGAACCAACTGGTAGAGAAGCTGCTGGTATGGGTAAAAAGGATATTGGGAAGTCGACGAAGAAAGCTGATAAAGGAAAGACAGCAAAAG AAGAGGCTCGTGAATTATTGCTGAAGGAGGAGGCAGCTGTACGAGATAAGGTTAGAGGTATACAGGACAACCTTTCATTGATGCTGAGAGCTCTTGGGGA AATGGCCATCTCTAACCCTGTATTTGCACACAGTCAACTACCTTCCCTGATTAAGTTTGTTGACCCTTTGCTACATTCACCTATAGTGAGTGACGTGGCC TATGAGACCTTGGTGAAGCTATCCAGATGTACAGCCACACCTCTTTGTCATTGGGCTCTTGACATTGCTACTGCTCTACGCCTTATTGTGACCAAGGATG TCAGTGTTTTCTTGGATCTTATTCCAATAGCTGGTGACGGGGAAGCCAATGAGAGTCCTTCTTTGGGTCTTTTTGAGAGAATAATTAATGGCTTATCTGT GTCTTGTAAACCTGGACCTCTTCCTGTAGATTCTTTTACTTTTGTATTTCCTATAATGGAGCACATTCTATTATCACCCAAGAAGACTGGACTTCATGAT GATGTGCTTCGTATTCTCTATTTGCACATGGATCCACTGTTACCCCTTCCTAGACTTCGAATGCTATCAGCTCTTTATCATGTTCTAGGTGTTGTTCCTG CCTATCAGGGCTCCATTGGACCAGCATTAAATGAATTGTGCCTCGGTTTACAACCAGAGGAAGTTGCACCTGCACTGTATGGAGTGTATGCAAAAGATGT TCATGTAAGAATGGCCTGCTTAAATGCCATAAAATGTATTCCAGCAGTTGCCAGCCGATCTGTCCCCGAGAATGTTGAGGTTGCAACTAGTCTTTGGATT GCTCTACATGATCCAGAAAAGTTAGTTGCTGAAGCTGCAGAGGATATTTGGGATCGCTATGGACATGACTTTGGGACCAATTATTCTGGACTTTTCAAAG CACTTTCTCATATTGATTACAATGTGCGGTTGGCTGCTGCAGAGGCATTAGCTGCTGCTTTGGATGAAAATCCAGATACTATACAGGAATCTCTTTCTAC TTTATTTTCTTTATATATCCGGGATGCTGGTTTTGGTGAGGATACTGTTGATGCTGGTTGGCTGGGCAGACAAGGAATAGCACTGGCTTTACATTCTGCT GCTGATGTTCTAAGAACAAAAGACCTCCCTGTTGTTATGACATTCCTCATATCACGAGCATTGGGTGACCTTAATGCAGATGTTCGAGGAAGAATGATCA ATGCTGGCATCATAATTATTGATAAGCATGGAAGAGACAATGTTTCCTTGTTGTTTCCAATCTTTGAGAACTACCTGAACAAGAAGGCATCAGATGAGGA AAAATATGATTTGGTTCGTGAGGGTGTTGTTATTTTTACTGGAGCCTTGGCAAAACACTTGGCTAAGGATGATCCCAAAGTCCATGCAGTGGTGGAGAAG TTGTTGGATGTTTTGAATACTCCATCAGAGGCTGTTCAGCGGGCAGTTTCGTTTTGCTTATCTCCACTAATGCAGTCAAAGAAAGATGATGCACCTGCTC TTGTTTCTAGGTTATTGGATCAACTTATGAATAGTGACAAATATGGGGAACGCCGAGGAGCAGCTTTTGGACTTGCTGGAGTGGTCAAGGGATATGGAAT ATCTTGCTTGAAGAAGTATGGAATTACTGCTGCAATAAGGGAAAGTCTTGCAGATAGGAGTTCAGCAAAACATCGTGAAGGAGCTCAACTGGCTTTTGAG TGCTTTTGTGAAACACTTGGAAAACTGTTTGAACCGTATGTGATTCAAATGTTGCCGTTACTTTTGGTTTCTTTCTCTGACCAAGTTGTAGCAGTTCGTG AAGCTGCTGAATGTGCTGCTCGTTCAATGATGTCTCAACTTAGTGCACAGGGGGTGAAGCTTGTGCTTCCATCGATTCTAAAGGGTCTTGAGGATAAAGC CTGGCGGACAAAGCAAAGCAGTGTACAACTACTTGGTGCTATGGCATACTGTGCTCCTCAACAATTGTCTCAATGCCTTCCTACTATCGTGCCCAAACTG ACGGAGGTTTTAACTGATACGCATCCCAAAGTCCAGTCAGCAGGACAAATGGCACTCCAGCAGGTCGGGAGTGTGATAAAGAATCCAGAAATATCTTCTC TTGTCCCTACGCTTCTCATGGGCCTAACAGACCCCAATGAGTATACAAAATATTCTCTTGATATTCTCCTCCAGACAACTTTCATTAATTCAATTGATGC CCCATCACTTGCACTATTGGTACCTATAGTTCATAGGGGTCTTAGGGAGAGGAGTGCTGAAACTAAAAAGAAAGCTGCACAAATAGTTGGAAACATGTGT TCGTTGGTTACAGAACCGAAGGATATGATTCCTTACATAGGGTTGCTTCTTCCTGAAGTTAAAAAGGTTCTTGTGGATCCAATTCCAGAAGTTCGGTCTG TGGCAGCAAGGGCCATTGGATCTCTTATAAGAGGAATGGGCGAGGAAAACTTCCCTGATCTTGTTCCTTGGCTGTTTGACTCTCTTAAAACTGATAATAG TAATGTTGAGCGTTCTGGAGCTGCTCAAGGCTTGAGTGAGGTTCTATCTGCACTTGGCACAGGATACTTTGAACATGTGCTGCCTGATATTATCCGAAAC TGTTCTCATCAAAAGGCATCTGTGCGTGATGGATATTTAACACTTTTCAAGTATCTGCCAAGATCTTTAGGTGTTCAATTCCAGAATTATTTGCAGCAGG TGTTGCCTGCAATTTTAGATGGTCTTGCGGATGAGAATGAATCTGTTCGTGATGCAGCATTAGGTGCTGGCCATGTCCTGGTGGAGCACTATGCAACAAC GTCCTTGCCTCTTCTCCTTCCTGCTGTTGAAGATGGTATTTTCAATGATAATTGGCGCATCCGGCAAAGCTCAGTGGAATTGTTAGGAGATCTCTTGTTT AAGGTAGCTGGGACTTCTGGAAAAGCTTTACTTGAGGGGGGTAGTGATGATGAAGGTTCTAGTACTGAAGCACATGGACGTGCTATTATTGAGGTTTTAG GAAGAGATAAGCGTAATGAAATTCTTGCTGCATTATACATGGTCCGGACTGATGTCAGTTTATCTGTGCGTCAGGCTGCCTTACATGTATGGAAAACAAT AGTGGCCAATACTCCTAAGACTCTTAAGGAAATAATGCCAGTTTTAATGAGTACTTTAATATCTTCTCTGGCATCGTCATCTTCTGAAAGGCGGCAGGTT GCTGCACGAGCATTGGGTGAACTTGTTCGAAAGCTCGGTGAAAGAGTGCTTCCTTTGATCATCCCAATCCTATCCCAGGGGCTAAAGGATCCTAATCCTA GCAGAAGACAAGGTGTATGCATTGGTCTGAGTGAAGTGATGGCAAGTGCTGTGAAGAGTCAATTATTGAGTTTTATGGATGAACTCATCCCTACAATCCG GACTGCCCTTTGTGATAGCATGCCTGAGGTGCGTGAGTCTGCAGGCTTAGCATTCAGCACTCTGTACAAGAGTGCTGGAATGCAAGCAATTGATGAAATT GTTCCAACACTGCTGCATGCTCTGGAGGATGATGAGACCTCTGATACGGCGCTTGATGGTCTCAAACAAATCTTAAGTGTCAGGACTACAGCTGTACTGC CTCATATTTTGCCCAAGCTGGTCCATCTTCCCCTTTCTGCCTTCAATGCACATGCACTGGGAGCCTTAGCTGAGGTTGCAGGACCTGGTCTTAACTTTCA CCTTGGTACTATTCTTCCTGCTTTACTTTCTGCAATGGGTGCTGAGGACAAGGATGTTCAAACTTTGGCTAAGAAGGCTGCAGAAACAGTGGCCTTGGTC ATAGATGAGGAAGGCGTTGAGTATCTGATAGCAGAACTTCTAAAAGGTGTTGGGGATACTCTGGCTTCGATCAGAAGAAGTTCATCATACCTGATAGGAT TTTTCTTCAAATACAGCAAGTTATATTTGGTAGATGAAGCACCAAATATGATATCTACTCTGATCATTTTGCTGAGTGATTCAGATTCATCAACTGTTGA GGTTGCTTGGGAAGCTTTATCAAGGGTTATTGGTTCTGTTCCTAAGGAGGTGCTTCCTTCATATATAAAATTAGTACGTGATGCTGTGTCCACGTCCAGA GATAAAGAGCGAAGGAAAAAGAAGGGAGGACCAGTTGTCATTCCAGGTTTCTGTCTCCCAAAAGCTCTTCAGCCATTGCTTCCGATATTTCTTCAAGGTC TAACAAGTGGCTCTGCTGAATTAAGAGAGCAGGCAGCACTGGGTCTTGGGGAGCTCATTGAGGTGACTAGTGAAAAAGCATTGAAGGATTTTGTCATTCC AATCACTGGGCCTCTTATCCGGATCATAGGCGACCGGTTTCCTTGGCAGGTGAAGAGTGCCATCTTGTCTACATTGAGCATCTTAATACGGAAGGGTGGG ATGTCCCTGAGGCCTTTTCTTCCTCAGCTTCAAACAACATTTATCAAGTGCTTACAAGATAGTACAAGGACTGTTCGTACAAGTGCTGCTTTTGCTCTTG GAAAGCTTAGTGCACTCAGTACAAGAGTTGATCCTCTAGTCAGTGACCTCCTGTCCAGCTTGCAGGCATCAGATGCTGGTGTTCGGGAGGCAATTCTCAC AGCTTTAAAAGGTGTCCTTAAGCATGCTGGGAAAAGTGTGAGCGATCCTGTCAGAGTTCGTGTTTTCAGTCAACTCAAGGATTTAATTCATCATGATGAT GACCAAGTCCGAATATCTGCTGCCAGCATATTGGGTATCACTTCACAGTACATGGAAGAGCCTCAGCTTGATGATCTGCTTGAACTACTCTCAAATTTGG CATCTTCTCCTAGCTGGGTGTCCAGGCACGGCTCAGTACTCACCATCTCATCCTTGCTTAGGCACAATCCTTCCTCTGTTGTTACATCCCAAATGTTTCC ATCTATCATGCGCTGCCTTAAAGATGCCCTGAAAGATGAGAAGTTTCCTCTTCGTGAAACTTCAACAAAGGCATTAGGAAGGCTTATACTTCATCAGATT CAGAGTGATCCATCTGAAGCCACTGCATATGTTGATATCATTTCGACAATAGTGTCTGCTTTGCACGATGACTCCAGTGAAGTCAGAAGGAGAGGTTTAT CTGCTTTAAAAGCTGTTGCAAAAGCAAGTCCTCCATCAATTACGGTCCATGTTTCCATTATTGGTCCTGCACTTGCTGAATGTTTGAAGGACAGTAGTAC TCCGGTGAGGCTAGCCGCGGAAAGATGTGCTGTGCATGCCTTCCAGATGACAAAAGGTACAGACAATGTTCAAGCGGCTCAAAAATTTATTACAGGCTTG GATGCTAGGCGACTTTCAAAGTTCCCTGAATATAGCGATGAGAGCGAAGACAGTGAAGAAGAATCAACAAGTGGCTAA
AA sequence Show only first row Show all	>Potri.019G024200.3 pacid=42774715 polypeptide=Potri.019G024200.3.p locus=Potri.019G024200 ID=Potri.019G024200.3.v4.1 annot-version=v4.1 MADSLTSLSTSVSTSSTKLRIRIFRHDVVSLLANAEMTVELASMLVDTIFRTLFIYDDRRSRKAVDDVIIKSLNEVIFMKSFAGAVVQAMEKQLKVQSHV GCYRLLNWSVLLLTKSQFSSVSKNAVSRVASAQAGLVNLVMQRSFRERRACKRIFFHLFSQSLDIYKIYIEELKNGRVAYKESPELIRLLLEFSSASSSR FEQCKSIFMDIYLKAVLNAREKPVKELSECFYPLFRHLSHEDFQNVVLPSSVKMLKRNPEIVLEAVGVLLDSVSLDLSKYGIELLSVVLSQVRHADEGRR VGALAIVRCLSQKSSNPDALEAMFNAVKAIIGGSEGRLQFPYQRTGMFNAVQELSHAPDGKFLNSLVLTICSFLLSCYKEEGNEEVKLAILSAVASWAAR SADSVQLDLVSFIAAGLKEKEVLRRGHLRCLQVICKNADAVLQISSLFGPLVQLVKTGFTKAVQRLDGVYALLVVGKIASTDIKTEETLAKEKIWSFISQ NEPSLVPISLASKLSNEDCMACVDLLEVLLVEHSRRVLEAFSVKLLFQLMVFLLCHPSWDVRKMSYVATRKIITAIPLLSELLLLEFTNFLSVVGERLSL LGTSDSDNSLDAQVAFLPSVEVLVKALAVISCATLAASPSVSTQVIFCSHHPCMVGTAKRDVVWKRLRKCLRRLGIDVIGIVSADVENLCKGLLGPMGLA SLNPLEQEAAIYSLSTLMSITPRDMYLAFEKQLKNHPDRYAHDMLSESDIRIFHTPEGMLSSEQGVYVAESVASKNTRQAKGRFRMYEDHNDMDDVNSNQ FVKREPTGREAAGMGKKDIGKSTKKADKGKTAKEEARELLLKEEAAVRDKVRGIQDNLSLMLRALGEMAISNPVFAHSQLPSLIKFVDPLLHSPIVSDVA YETLVKLSRCTATPLCHWALDIATALRLIVTKDVSVFLDLIPIAGDGEANESPSLGLFERIINGLSVSCKPGPLPVDSFTFVFPIMEHILLSPKKTGLHD DVLRILYLHMDPLLPLPRLRMLSALYHVLGVVPAYQGSIGPALNELCLGLQPEEVAPALYGVYAKDVHVRMACLNAIKCIPAVASRSVPENVEVATSLWI ALHDPEKLVAEAAEDIWDRYGHDFGTNYSGLFKALSHIDYNVRLAAAEALAAALDENPDTIQESLSTLFSLYIRDAGFGEDTVDAGWLGRQGIALALHSA ADVLRTKDLPVVMTFLISRALGDLNADVRGRMINAGIIIIDKHGRDNVSLLFPIFENYLNKKASDEEKYDLVREGVVIFTGALAKHLAKDDPKVHAVVEK LLDVLNTPSEAVQRAVSFCLSPLMQSKKDDAPALVSRLLDQLMNSDKYGERRGAAFGLAGVVKGYGISCLKKYGITAAIRESLADRSSAKHREGAQLAFE CFCETLGKLFEPYVIQMLPLLLVSFSDQVVAVREAAECAARSMMSQLSAQGVKLVLPSILKGLEDKAWRTKQSSVQLLGAMAYCAPQQLSQCLPTIVPKL TEVLTDTHPKVQSAGQMALQQVGSVIKNPEISSLVPTLLMGLTDPNEYTKYSLDILLQTTFINSIDAPSLALLVPIVHRGLRERSAETKKKAAQIVGNMC SLVTEPKDMIPYIGLLLPEVKKVLVDPIPEVRSVAARAIGSLIRGMGEENFPDLVPWLFDSLKTDNSNVERSGAAQGLSEVLSALGTGYFEHVLPDIIRN CSHQKASVRDGYLTLFKYLPRSLGVQFQNYLQQVLPAILDGLADENESVRDAALGAGHVLVEHYATTSLPLLLPAVEDGIFNDNWRIRQSSVELLGDLLF KVAGTSGKALLEGGSDDEGSSTEAHGRAIIEVLGRDKRNEILAALYMVRTDVSLSVRQAALHVWKTIVANTPKTLKEIMPVLMSTLISSLASSSSERRQV AARALGELVRKLGERVLPLIIPILSQGLKDPNPSRRQGVCIGLSEVMASAVKSQLLSFMDELIPTIRTALCDSMPEVRESAGLAFSTLYKSAGMQAIDEI VPTLLHALEDDETSDTALDGLKQILSVRTTAVLPHILPKLVHLPLSAFNAHALGALAEVAGPGLNFHLGTILPALLSAMGAEDKDVQTLAKKAAETVALV IDEEGVEYLIAELLKGVGDTLASIRRSSSYLIGFFFKYSKLYLVDEAPNMISTLIILLSDSDSSTVEVAWEALSRVIGSVPKEVLPSYIKLVRDAVSTSR DKERRKKKGGPVVIPGFCLPKALQPLLPIFLQGLTSGSAELREQAALGLGELIEVTSEKALKDFVIPITGPLIRIIGDRFPWQVKSAILSTLSILIRKGG MSLRPFLPQLQTTFIKCLQDSTRTVRTSAAFALGKLSALSTRVDPLVSDLLSSLQASDAGVREAILTALKGVLKHAGKSVSDPVRVRVFSQLKDLIHHDD DQVRISAASILGITSQYMEEPQLDDLLELLSNLASSPSWVSRHGSVLTISSLLRHNPSSVVTSQMFPSIMRCLKDALKDEKFPLRETSTKALGRLILHQI QSDPSEATAYVDIISTIVSALHDDSSEVRRRGLSALKAVAKASPPSITVHVSIIGPALAECLKDSSTPVRLAAERCAVHAFQMTKGTDNVQAAQKFITGL DARRLSKFPEYSDESEDSEEESTSG

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G64790		ILA	ILITYHIA (.1.2)		Potri.019G024200 [exp]	0	1
AT1G26170			ARM repeat superfamily protein...		Potri.008G109300 [exp]	2.00	0.9079
AT2G19260			RING/FYVE/PHD zinc finger supe...		Potri.006G075400 [exp]	3.46	0.9061
AT5G04480			UDP-Glycosyltransferase superf...		Potri.010G232000 [exp]	3.60	0.8927
AT1G11390			Protein kinase superfamily pro...		Potri.011G041500 [exp]	5.19	0.8768
AT5G01270		CPL2, ATCPL2	carboxyl-terminal domain (ctd)...		Potri.006G099402 [exp]	5.19	0.8995
AT1G34150			Pseudouridine synthase family ...		Potri.002G061650 [exp]	6.32	0.8993
AT1G43770			RING/FYVE/PHD zinc finger supe...		Potri.007G110400 [exp]	6.92	0.9000
AT5G01310	bHLH	APTX, bHLH140	APRATAXIN-like (.1)		Potri.016G120200 [exp]	7.48	0.9058
AT1G13050			unknown protein		Potri.008G184500 [exp]	9.89	0.8631
AT3G14980			Acyl-CoA N-acyltransferase wit...		Potri.001G392801 [exp]	9.94	0.8411

Compare expression of checked genes

Potri.019G024200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.