Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G73325 61 / 4e-11 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73330 40 / 0.0007 ATDR4 drought-repressed 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.019G122100 [exp] 416 / 2e-150 AT1G73325 61 / 3e-11 Kunitz family trypsin and protease inhibitor protein (.1) Potri.019G124750 [exp] 299 / 2e-104 AT1G73325 57 / 4e-10 Kunitz family trypsin and protease inhibitor protein (.1) Potri.019G124432 [exp] 297 / 1e-103 AT1G73325 57 / 4e-10 Kunitz family trypsin and protease inhibitor protein (.1) Potri.019G124400 [exp] 292 / 2e-101 AT1G73325 56 / 2e-09 Kunitz family trypsin and protease inhibitor protein (.1) Potri.010G007922 [exp] 253 / 3e-86 AT1G17860 53 / 1e-08 Kunitz family trypsin and protease inhibitor protein (.1) Potri.010G007900 [exp] 253 / 3e-86 AT1G17860 53 / 1e-08 Kunitz family trypsin and protease inhibitor protein (.1) Potri.010G007811 [exp] 253 / 3e-86 AT1G17860 53 / 1e-08 Kunitz family trypsin and protease inhibitor protein (.1) Potri.010G007700 [exp] 236 / 2e-79 AT1G73325 62 / 1e-11 Kunitz family trypsin and protease inhibitor protein (.1) Potri.010G010111 [exp] 231 / 2e-77 AT1G17860 57 / 4e-10 Kunitz family trypsin and protease inhibitor protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007890 [exp] 61 / 4e-11 AT1G17860 166 / 7e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007902 [exp] 59 / 1e-10 AT1G17860 162 / 3e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10030355 [exp] 59 / 2e-10 AT1G17860 149 / 5e-45 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007892 [exp] 56 / 2e-09 AT1G17860 163 / 1e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007888 [exp] 47 / 2e-06 AT1G17860 125 / 7e-37 Kunitz family trypsin and protease inhibitor protein (.1) Lus10004223 [exp] 40 / 0.0004 AT1G73260 81 / 1e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Lus10029429 [exp] 40 / 0.0008 AT1G73260 77 / 4e-17 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0066 [poplar] [flax] Trefoil PF00197 [poplar] [flax] Kunitz_legume Trypsin and protease inhibitor
Representative CDS sequence Show only first row Show all	>Potri.019G124500.1 pacid=42774201 polypeptide=Potri.019G124500.1.p locus=Potri.019G124500 ID=Potri.019G124500.1.v4.1 annot-version=v4.1 ATGAAGATCACCAAGTTTGTAGTGCTCTCCTTTCTTCTCTTTGCCTTCACAGCAACTTCAATATTTCCTCATGCTGTTCATGCAGAAGATCCTGAAGCAG TGATCGATGTCAACGGTAATGAGGTGACAGCTGATGCTCGTTATTTCATCGGAGCCGCTTCGGATGATAATACAACAACTCTTGCGGTCTCTGCGACTAG CCAGATCATATGCAATTCAGATGTTATACTTTCCTCAATGAGCAATGGGCTCCCAGTAACATTTTCATCACCAGTTGGAGAATCCAACGACGGTGTCATC CGCGAAGACAGTTATCTGAATGTGAACTTTGATGCAGCCACATGTAGGATGGCGGGCGTATCAACCATGTGGAAGATGGAGTTGAGGCCAACAATGCGAG GATTCGTTGTGACCACAGGAGGTGTTGATGGATTGAATCGGTTTAAGATCACCAAGTATGAAGGTGGTAATAATTCGTATCAGCTTTCTTACTGTCCAAT TTCCGACCCCATGTGCGAATGCTCATGCGCATGCGTCCCACTTGGCAACGTTGTCGATCGCTTGGCTCCCAGCACCATCCCTTTTCCTGTTGTGTTTGAA CCAGTTGCAGATAAAAGCTCCTGA
AA sequence Show only first row Show all	>Potri.019G124500.1 pacid=42774201 polypeptide=Potri.019G124500.1.p locus=Potri.019G124500 ID=Potri.019G124500.1.v4.1 annot-version=v4.1 MKITKFVVLSFLLFAFTATSIFPHAVHAEDPEAVIDVNGNEVTADARYFIGAASDDNTTTLAVSATSQIICNSDVILSSMSNGLPVTFSSPVGESNDGVI REDSYLNVNFDAATCRMAGVSTMWKMELRPTMRGFVVTTGGVDGLNRFKITKYEGGNNSYQLSYCPISDPMCECSCACVPLGNVVDRLAPSTIPFPVVFE PVADKSS

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G73325			Kunitz family trypsin and prot...		Potri.019G124500 [exp]	0	1
AT1G73325			Kunitz family trypsin and prot...		Potri.019G122100 [exp]	2.00	0.9970
AT1G22360		ATUGT85A2, AT2	UDP-glucosyl transferase 85A2 ...		Potri.002G098400 [exp]	3.00	0.9756	AT2.2
AT2G27690		CYP94C1	"cytochrome P450, family 94, s...		Potri.009G145400 [exp]	4.00	0.9545	CYP94C5,Pt-CYP94.4
AT1G73325			Kunitz family trypsin and prot...		Potri.019G124432 [exp]	5.29	0.9585
AT1G73325			Kunitz family trypsin and prot...		Potri.019G124400 [exp]	6.00	0.9601
AT1G11580		ATPMEPCRA	methylesterase PCR A (.1)		Potri.011G025400 [exp]	6.00	0.9186
AT5G60700			glycosyltransferase family pro...		Potri.009G010900 [exp]	6.70	0.9526
AT1G30760			FAD-binding Berberine family p...		Potri.011G159400 [exp]	9.94	0.9326
AT1G73325			Kunitz family trypsin and prot...		Potri.019G124750 [exp]	10.19	0.9236
AT2G01150		RHA2B	RING-H2 finger protein 2B (.1)		Potri.005G081300 [exp]	10.39	0.9263

Compare expression of checked genes

Potri.019G124500 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.