Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G36930 415 / 2e-123 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) AT1G27170 384 / 4e-111 transmembrane receptors;ATP binding (.1.2) AT1G27180 368 / 5e-105 disease resistance protein (TIR-NBS-LRR class), putative (.1) AT1G69550 355 / 5e-101 disease resistance protein (TIR-NBS-LRR class) (.1) AT4G16890 341 / 5e-97 BAL, SNC1 SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1, BALL, disease resistance protein (TIR-NBS-LRR class), putative (.1) AT5G17680 341 / 6e-97 disease resistance protein (TIR-NBS-LRR class), putative (.1) AT5G44510 328 / 5e-93 TAO1 target of AVRB operation1 (.1) AT5G41750 322 / 8e-92 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) AT2G14080 319 / 7e-90 Disease resistance protein (TIR-NBS-LRR class) family (.1) AT5G11250 314 / 2e-88 Disease resistance protein (TIR-NBS-LRR class) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014207 [exp] 1010 / 0 AT5G36930 446 / 5e-135 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10004257 [exp] 983 / 0 AT5G36930 446 / 7e-136 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10001366 [exp] 963 / 0 AT5G36930 424 / 1e-125 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10023272 [exp] 906 / 0 AT5G36930 423 / 4e-126 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10042165 [exp] 870 / 0 AT5G36930 326 / 9e-94 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10026011 [exp] 860 / 0 AT1G27170 423 / 5e-127 transmembrane receptors;ATP binding (.1.2) Lus10037406 [exp] 844 / 0 AT5G36930 395 / 5e-116 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10020238 [exp] 841 / 0 AT1G69550 391 / 7e-117 disease resistance protein (TIR-NBS-LRR class) (.1) Lus10010574 [exp] 833 / 0 AT5G36930 397 / 4e-119 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G053200 [exp] 463 / 2e-139 AT1G27170 1187 / 0.0 transmembrane receptors;ATP binding (.1.2) Potri.005G206400 [exp] 449 / 2e-138 AT5G36930 587 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T002400 [exp] 430 / 5e-131 AT5G36930 658 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.002G056100 [exp] 428 / 2e-128 AT5G36930 591 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G007884 [exp] 427 / 7e-128 AT5G36930 654 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G001602 [exp] 421 / 3e-126 AT5G36930 778 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T001500 [exp] 421 / 7e-126 AT5G36930 641 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.007G099700 [exp] 420 / 7e-126 AT5G36930 562 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G021681 [exp] 421 / 8e-126 AT5G36930 641 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G002500 [exp] 421 / 3e-125 AT5G17680 587 / 0.0 disease resistance protein (TIR-NBS-LRR class), putative (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0173 [flax] [poplar] STIR PF01582 [flax] [poplar] TIR TIR domain CL0022 [flax] [poplar] LRR PF00560 [flax] [poplar] LRR_1 Leucine Rich Repeat CL0023 [flax] [poplar] P-loop_NTPase PF00931 [flax] [poplar] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Lus10001375 pacid=23170138 polypeptide=Lus10001375 locus=Lus10001375.g ID=Lus10001375.BGIv1.0 annot-version=v1.0 ATGATAAAACATCACGCCGAGAACGAACCTGAATGCCACAACATTAGGATTTCCGACGTGGATGCTACGCTTCTTACACTTGGTTATAGAACGCTTGGCA AGATCGTCCAACTCATTATATACTCCAGTCCAATTCAAAGAGGCTGGGAAGGATATGATCAACCCCAACTTGTAAACTTGATGGTGCTTGATCTCTCTTA TTGTGAGAATCTAATCACTATTCCGAATATATCAAGTTCTTTGAATCTTGAAGAGCTCGTTCTTCCTAGATGTGAAAGCCTAGTTGAGGTACCTTCTACT GTTCAATATTTGACCAAGTTGATAACATTTGATCTCAGTGAATGTCGAAACCTCAAGCATCTTCCGCCTAAACTTAACTCAAAGTTCCTTAATAGCATCA TGTGGATGTGGTGGTTGGGGGGATGGTGGTGGCCAATTGTTTTCTCTATTGCGGCTTTGTTGCTTCCCTTGTTCGTCTTCTCAAGGTTTCTCTTCTCCAA GAGGAGACCTGTTATTTCCTATTCAAACGTTTCAGCAGGATATGTATCTACCGAACCAGTCGACTCTCCAGTTTCTGATTCCTCGCTATTGCCGCTTCCA GCGGGAGAGTACGAGGTTTTCCTGAGCTTCACAGGTCCAGAAGTTCGCAACAATTTCGGTGATTTCCTCTACAATTACTTGGTTCGGTCCAGAGTTCGGA CGTTTCGTGATGAGGAGGGGCTTCACAAGGGGGAGAAGATTGGCCCTCAACTCTTGGGGGCAATAGATCAGTCTAAGGTCTACATCCCCATATTGTCCCG CGGCTATGCTTTTAACAAAGTGTGTCTTAGAGAGCTTGCCAGAATGGTGGAGTGTTGCAAGAGAGAAAAGGGGCACATCATTTTGCCGATTTTCTACTAT GTGCACCCAGAGGAAGTGCAACATCAAAAGGGTCCTTTTATGGAAGCATTTGAGCAGCACAAGAAGGAACATGGCGAGGAGACTGTCAGAGAATGGAAAG CCGCTTTGGGAGAGGTTGGTGCTGTTAAAGGATGGCACGTCACTGTCTCAGATGGGCAAGGAGCGATAGCAGAGGATGTTTTCTCAACAGTTTGGTCACA TCTAAGGAGGGATTACTTACTATTGACCGATGAGTTGGTTGGGATTGATCATCACGTTGATGCAGTGATAAAATTACTGAATGTGGATGGTGAAGGGGTC AAAATTGTTGGTATTCATGGAATGGGTGGGATTGGGAAGACCACTATTGGCATGGCTGCCTACAACAAAGTATTTCCTTACTTCGATCGTTGTTGCTTCG TGGAAGATATACGAGAAGTCTTAGAGCAAAATGATGGTGCTGTGACTCTGCAAAATAAGCTCATCTCTGCCATTCTAAATATGAAGGATGGTTGCAGTAT TAGAGATGCCAGTGAAGGGATAAACATGATTAAAGACAGAGTTTGCCGGCACAAAGTTCTCATTTGTCTGGATGACGTGGACAATAAGTTTGACTTCGGA AAAATCTTAGGTAAACGTGAAAGTTTTTCCTCGGGAAGTAGGTTCATCATTACAACAAGGGATAAGAAAGTTCTAAATTTGCTGAAAGATTACGAGTTGT ATGAGCCTGAAGCAATGAGTGGTGAGCATTCCCTTCAACTCTTTTGCAAGCACTCATTTGGAATGGATTATCCTCCGAAAGATTATGCTACTCTATCTAG AGACATCACATCAACTGCAGCAGGGCTTCCTTTGACTCTTAAGGTTGTTGGTTCAAGTTTGTTTGGTGAAGATAAAGCAATATGGGAAGAAACATTGGTT CAACTAAAAGAAACGCTACCTACAGAGGTCCAGCAGAAACTGAAGATAAGTTATAATGCATTAACATATGAGGAGCAACAGATCTTTCTCGACATTGCTT GCTTCTTCGTTGGAGAGGACAAAGATATTCCTTCCTATATGTGGAAGGACTGTAAATTTTACCCAGTAACTGGGATTAATATCCTTATTCTTAGATCTTT TATAAAGATTGGAGAAGATAACGAGCTGAGAATGCATGATCAGCTTAGAGATCTTGGTAGGGCCATTGTCCGAGAGGAAAATATAGAACAGCCCTGGAAA CGCAGTAGGTTGTGGTCTAATGATGAAGCACTGGATGTGCTAAAGCGCAAAAAGGGGACAGATATGGTAAGAGGATTTAGGGTCAATTTGAAGTCAGAGT CTGCAAGTCATCATCGACTCACAAGCGAGAAACTGGAGAATTTATCGGACTTGAGATATCTAGCAGCAGATTATGCAGACCTCTGTGGGAACTTCCATGA ACTTGTTTCAAATTTAAGGTGGCTTGATTTGCATTGCCATCTAGGGAATTCACCGTTGACCAACTTTCATCCCAAGAAGTTGGTCATTCTCGAATTATCC AGTAGCACTGTCAAAGATGACTGGGAAGGTTGGAGCCAAATTCAGATAGCTGAAAATTTGAAAGTTCTGGATCTCTCCCTCTGCAATGAACTAACCAAAG CTCCTGACCTTTCTGCCTATCGGAATCTCGAGTTGTTAAATCTAAATGGATGTGTCAATATGGTTCAAGACTTGGGCGTTGGTGATCTGAAAAATCTGAA GGTACTAAAGCTCAACAATTGTGGAATTACAAAATTAGCTGATAAGATTGGAATGCTTCTCAAACTTGAGCAAATAGAGGCCTCATGGTGCCCCAATCTG AAAGAAATTCCTGCTGATATTGGCCAATTAGCCTCTCTGAAGATCTTGATTGTAGAATCTCCATTAATTTGTCACTTACCAGCAAGCATTTCTAAGCTTT CAAGCCTCCAAATCCTTGATTTACAAGGCTGTCCTAACATGCAGAAACCAACAGATCTCCCAGCAAGTTTACAGAAGTTAATCATCACATCACCTGTTCC TAATCTCTTGGACCTTAGGGAGTTGAAGGAGTTACGTATCTACGAGTCCGATGAGATTGAAGAAATTCCTCAAGATATATGTGTGCTGTCCAAGCTGGAG AGGTTGGGTCTGTATGCTACTCCTAATATCAGGACTATACCAATGGGGATTGGTGCCATTCAGCAGCTTGTTGAACTCAGGCTGAACTCCTGCGAGGGCC TTCAGCACATAGAAGAGCTTCCATCATCTCTGAACATACTATATATAGGGGGTTGTCCATTATTGGAGAGATTGCCAAATCTAGCAAACCTTAGTAATCT GATTCAGTTGACCCTGACATGCCCCATGCTACAAGAGATTTCAGGCCTTGGAGAACTGAAGGTATTGGTAGATTTACGTATACATAACGGCTTCAATTTG CGTGATCTCGATGGCTTCGAAAACCTCGCATCTTTGAAATTCTTGCTAGTTGAAAAGTGTCGTGAAATGGAGAATCTACCAAGTGTAGCAACTTTGAAGA AGCTAAAGAGACTTGAGATCTGTGAATGTCCTAAGTTCAGTGAAATTCAGGGCCTTGGTGAGTTGGAGTCTTTAGAAAACCTTATTATTGACGATTGTCT TTCCTTTCAAATATTATCCCTTTCTAAGAGTATGAAGAAGATAAACCAACTGACTGTCCACGAATGTCCTCATCTCACTGACATCCAAGGCCTTAGTGAG CTTAAGTCACTAGAATATCTGAATGTTAAGGATTGCAAATCCCTGGAAAGATTACCGTGTTTGGCTGGTTTGAAGAATATCGACGGAATATGTATATGCA GATGTTACTCTCTCACTGAAATCCAGGGCCTCGATGAACTGGAGTCCTTGGATCATCTTGATTTGAGTGACTGTACATCCATAGAAAGGTTACCTGATCT ATCAAGGTTGAGATTACTAAAAACACTAGTTCTGGACAATTGTGAGAGCTTGCCAAGTGTTGCTGGTCTCGAGGCTCTAGAATCACTAGAAAATTTGAAC TTGGGCGATTGTCAGTCAATACAAAGATTGCCTCGTCTATCACAGTTACAGAAGCTAGAAAAATTAGTCATGAATGATAGCCTGCATTTACGTGAGATTG AGAGCTTTGAAGGCTTGGAGTCATTGGAGAAGCTAGACGTTTCAGGATGTATGGGGCTTGAAAGATTACCAGATCTGTCTGGTTTAAAGAACCTTAAGGA GGTAGATATTGGTGAATGCGTGAAGTTGACTGAGGTCAGGGGACTCGAGGGATTGCAGTCTCTGACAGTGCTGAAGTTGAATGATTGCAAGTCGATTGAA AAGTTACCGAACATTTCACATCTTAAACACTTGAAGACGTTGTCTCTAAAGGGCTGTAAGAAACTGACTGAGGTGGATGGGCTTGAAGAACTGAACCTAT CGCTTCTGGACATATCTGGGTGCGAGTTGCTCTCAAGCATACCAGATTTGGCGAACACAGAAGTCCTGAGATAG
AA sequence Show only first row Show all	>Lus10001375 pacid=23170138 polypeptide=Lus10001375 locus=Lus10001375.g ID=Lus10001375.BGIv1.0 annot-version=v1.0 MIKHHAENEPECHNIRISDVDATLLTLGYRTLGKIVQLIIYSSPIQRGWEGYDQPQLVNLMVLDLSYCENLITIPNISSSLNLEELVLPRCESLVEVPST VQYLTKLITFDLSECRNLKHLPPKLNSKFLNSIMWMWWLGGWWWPIVFSIAALLLPLFVFSRFLFSKRRPVISYSNVSAGYVSTEPVDSPVSDSSLLPLP AGEYEVFLSFTGPEVRNNFGDFLYNYLVRSRVRTFRDEEGLHKGEKIGPQLLGAIDQSKVYIPILSRGYAFNKVCLRELARMVECCKREKGHIILPIFYY VHPEEVQHQKGPFMEAFEQHKKEHGEETVREWKAALGEVGAVKGWHVTVSDGQGAIAEDVFSTVWSHLRRDYLLLTDELVGIDHHVDAVIKLLNVDGEGV KIVGIHGMGGIGKTTIGMAAYNKVFPYFDRCCFVEDIREVLEQNDGAVTLQNKLISAILNMKDGCSIRDASEGINMIKDRVCRHKVLICLDDVDNKFDFG KILGKRESFSSGSRFIITTRDKKVLNLLKDYELYEPEAMSGEHSLQLFCKHSFGMDYPPKDYATLSRDITSTAAGLPLTLKVVGSSLFGEDKAIWEETLV QLKETLPTEVQQKLKISYNALTYEEQQIFLDIACFFVGEDKDIPSYMWKDCKFYPVTGINILILRSFIKIGEDNELRMHDQLRDLGRAIVREENIEQPWK RSRLWSNDEALDVLKRKKGTDMVRGFRVNLKSESASHHRLTSEKLENLSDLRYLAADYADLCGNFHELVSNLRWLDLHCHLGNSPLTNFHPKKLVILELS SSTVKDDWEGWSQIQIAENLKVLDLSLCNELTKAPDLSAYRNLELLNLNGCVNMVQDLGVGDLKNLKVLKLNNCGITKLADKIGMLLKLEQIEASWCPNL KEIPADIGQLASLKILIVESPLICHLPASISKLSSLQILDLQGCPNMQKPTDLPASLQKLIITSPVPNLLDLRELKELRIYESDEIEEIPQDICVLSKLE RLGLYATPNIRTIPMGIGAIQQLVELRLNSCEGLQHIEELPSSLNILYIGGCPLLERLPNLANLSNLIQLTLTCPMLQEISGLGELKVLVDLRIHNGFNL RDLDGFENLASLKFLLVEKCREMENLPSVATLKKLKRLEICECPKFSEIQGLGELESLENLIIDDCLSFQILSLSKSMKKINQLTVHECPHLTDIQGLSE LKSLEYLNVKDCKSLERLPCLAGLKNIDGICICRCYSLTEIQGLDELESLDHLDLSDCTSIERLPDLSRLRLLKTLVLDNCESLPSVAGLEALESLENLN LGDCQSIQRLPRLSQLQKLEKLVMNDSLHLREIESFEGLESLEKLDVSGCMGLERLPDLSGLKNLKEVDIGECVKLTEVRGLEGLQSLTVLKLNDCKSIE KLPNISHLKHLKTLSLKGCKKLTEVDGLEELNLSLLDISGCELLSSIPDLANTEVLR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G36930			Disease resistance protein (TI...		Lus10001375 [exp]	0	1
AT3G14470			NB-ARC domain-containing disea...		Lus10039540 [exp]	8.8	0.7992
AT2G22010		RKP	related to KPC1 (.1.2)		Lus10016817 [exp]	11.1	0.8197
					Lus10025603 [exp]	11.2	0.7742
AT5G22730			F-box/RNI-like/FBD-like domain...		Lus10035308 [exp]	21.6	0.7536
AT3G51620			PAP/OAS1 substrate-binding dom...		Lus10014166 [exp]	24.5	0.7993
AT5G04930		ALA1	aminophospholipid ATPase 1 (.1...		Lus10028875 [exp]	27.6	0.7855
AT3G52250	MYB		Duplicated homeodomain-like su...		Lus10036515 [exp]	37.1	0.7922
AT3G27670		RST1	RESURRECTION1, ARM repeat supe...		Lus10022263 [exp]	42.4	0.7538
AT5G36930			Disease resistance protein (TI...		Lus10007722 [exp]	47.0	0.6846
AT2G16365			F-box family protein (.1.2.3.4...		Lus10023554 [exp]	52.8	0.7422

Compare expression of checked genes

Lus10001375 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.