Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G14470 592 / 0 NB-ARC domain-containing disease resistance protein (.1) AT3G14460 508 / 2e-156 LRR and NB-ARC domains-containing disease resistance protein (.1) AT3G07040 170 / 8e-43 RPS3, RPM1 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) AT3G50950 169 / 1e-42 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 (.1.2) AT1G58390 166 / 9e-42 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G58400 164 / 4e-41 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G58602 159 / 5e-39 LRR and NB-ARC domains-containing disease resistance protein (.1.2) AT1G58410 156 / 2e-38 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G59218 151 / 1e-36 Disease resistance protein (CC-NBS-LRR class) family (.1), Disease resistance protein (CC-NBS-LRR class) family (.2) AT1G58848 151 / 1e-36 Disease resistance protein (CC-NBS-LRR class) family (.1), Disease resistance protein (CC-NBS-LRR class) family (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039509 [exp] 1056 / 0 AT3G14460 613 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10024173 [exp] 969 / 0 AT3G14460 681 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10039540 [exp] 871 / 0 AT3G14470 727 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Lus10016316 [exp] 636 / 0 AT3G14470 494 / 6e-156 NB-ARC domain-containing disease resistance protein (.1) Lus10005321 [exp] 584 / 0 AT3G14460 607 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10026109 [exp] 533 / 3e-166 AT3G14470 598 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Lus10026132 [exp] 524 / 1e-161 AT3G14460 594 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10002737 [exp] 367 / 8e-114 AT3G14460 167 / 7e-44 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10039548 [exp] 330 / 5e-102 AT3G14460 164 / 6e-44 LRR and NB-ARC domains-containing disease resistance protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G029300 [exp] 1040 / 0 AT3G14470 676 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.005G007001 [exp] 948 / 0 AT3G14470 647 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.003G055600 [exp] 902 / 0 AT3G14470 615 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.003G200200 [exp] 867 / 0 AT3G14470 634 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.017G015600 [exp] 860 / 0 AT3G14470 591 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.003G200800 [exp] 858 / 0 AT3G14460 509 / 7e-157 LRR and NB-ARC domains-containing disease resistance protein (.1) Potri.T126806 [exp] 852 / 0 AT3G14470 587 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.007G137101 [exp] 836 / 0 AT3G14470 616 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.T127106 [exp] 831 / 0 AT3G14470 594 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.003G200500 [exp] 830 / 0 AT3G14470 594 / 0.0 NB-ARC domain-containing disease resistance protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00931 [flax] [poplar] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Lus10007261 pacid=23165710 polypeptide=Lus10007261 locus=Lus10007261.g ID=Lus10007261.BGIv1.0 annot-version=v1.0 ATGGATGTAGCTTTAATCGGAGGATCATTCCTCTCTGCGTTTTTCCAGGTCTTGTTTGACAGGATGGCTTCTCCTGAGATAGTTAATTTCATCAGGGGCC ACAAACTCAATCACGTAATGATGAACAGGTTAAACCTGATGTTGAATTCTATCAGCGGAGTGCTTGATGATGCAGAAGAGAAACAGATAAGTAAGCCATC CGTGAAGAGGTGGCTTGATGAACTGAAAGATGCTACTCTTGAAGCTGATGACTTGTTGGATGAGATATGTTACGAATTCAAGCGGTTGGAGCTGGGACAT TGGGGAAAAGTGCGCAACTTCATATCTTACAGCTCATTCAGAGATGGTACCAATAAAAAGTTGAAAGAGATTCTTGACAGGCTGGAGGATTTAGTAAAAC AGAAGGATGTTCTTGGTCTGATTGAAGGCATTGCACGGAACCCATCATTTCAAAACAGAGTGACCACCTCTCTCCCAGATGGGTCAGCTGTTTACGGCAG GAAGAATGATGTAGAAGCCATAATATCTTTGCTGCAATCAAATTTCACTGCGAGTAGTAGCAACTCTATAGGTTTAATCCCACTTCTGGGTATGGGTGGT ATTGGTAAAACCACCATTGCTCAACTTGTCTACAAGGACATCAGAGTCCAACAATGGTTTGAGCTTAGGGCATGGATTTATGTCTCGGCCGAATTTGATG TCTATAAGGTGTCAAAAGATATTCTTGAAGAAGTCTGTGGTAGAAGTTGTGGCAGCACGACTCTCAATCAACTTCAACTTGGGTTGGAGAAGGCATTTGA AGGGAAAAGGTGTTTGCTAGTCTTTGATGACGTTTGGCATGACAAGTCTGCTTCTGACTGGGTCAACTTGCTTAAACCCTTGCAGTCCATGGCACCAGGA AGTATGATAATTGCTACGACCCGGAATCATAGTGTAGTGTCAGCTCTGCGCACTGTGCCAACCATTCGAATGTTTCCTCCTTACAATCTACAGATTCTAG ATGATGAAAACTGTTGGTCTTTGTTCGCTAAGACTGCTTTCGGTGATGGATATTCTAGTGCATGGGAGAAGTTACACGGCATTGGCAGAGAAATAATGAA GAAATGTAATGGCCTTCCATTAGCTGCAAAAACTCTGGGATGTCTTCTCCGTGCTGATTCGGATGTAGAAAAATGGCAGAATATATTGAAGAGCAACATA TGGGATTCATCAAATGACGACATTCTTCCAGCATTAATCTTAAGTTATCACTATCTTCCATCGCATCTAAAACCGTGTTTTGCGTACTGTGCAATGTTCC CCAAAGGATATGAATTTGAGAAGGAAGAAGTAGTCCGTTTATGGATGGCAGAGGGTTTTGTGATTCAACCAAAAGGAAGCAGGGTAATGAAAGACACTTG TGAGGACTACTTCAATGACCTTGTATCAAGGTCATTTTTACAACTCACAAGTGAACATCAGTTCTGCTTTACGATGCATGACCTCATACATGACCTGGCC AAATACGTTGCTGGAGAATTTTGCTATAGGATGGAGGATGCCAATTCATTCAAGGTTGCAGGAAGAACTCGTCATCTATCATTTGCAAGGGCAGAACTTG ATACCAGTATCATATGGGAGGGTATGTATAACGCTAAACGTTTGCGGACCTTATTGCCGGTGGATGGATCAAAATGGTGGAGTTATGATCCTGAGTGCAT AGATGACAAGGTACTCCAAAACATATTTTTGTCACTTACACGATTACGGGTGCTATCTTTGTCTGGGTTTAAAGTGAGCAAGTTGCCTGACGCAATTGGT GCCTTGAAGCATTTAAGATATCTGAATCTCTCCCTAGTTCTGTTACATAAGTTGCCTGATACCCTGTGCAACTTGTATAATTTGGAAATCTTGGTCTTGC ACAAATGCAAAAATATTCTGGCTTTACCTGATTTGATTGGCAATTTAAAGCAACTGCAGATTATGGATATCAGTGGAACACAAATTACAAGGTTTCCAGA TTCTTTTGTCAGTTTAATCAACTTATGTAGCCTAGATATTACAGAAACTACGTTGCAGGAGATGCCACTACAGATGAGTAACTTGTCAAGTCTTCGGAAT TTAACTGACTTTGTTATTGGAGCTCAGAGTGGGTCTCGTATTAAGGAGATGGGGGGGCTTCAGCATCTCTTAGGAAGTCTTCGTATATGGAATCTTGAAA ATGTTTTGGATTGTCAAGATGCCTTAGATGCTAGCTTCAAGATTAAGAAGCACATCAGTAGATTGGAGTTAAGATGGAATGGCGATACTAATGATTCATT GCATGAAAGAGGTGTATTGGAGAACTTGCAGCCTCATATGAACTTGCAGCATCTTGTCATAGAAGGTTATGGAGGAACAAGCTTTCCAGGTTGGATTGGA CATTCATCCTTCTCTTATTTACTATCTATCGAACTTACTGGATGCAAGTACTGCTCCTCCTTACCACCACTTGGGCAGTTAATGTCTCTTGAAAAGCTTT CTATCAAAGTATTTGAGGGAGTTGTCACTGTGGGTCCTGAGTTCTATGGCAGCAGCACATTCACAAACAAGCCATTTCGGTCTCTTAAAAGTTTGAAATT TGAACAGTTGCCAGAATGGACTGACTGGATTGCTTATGTCGGACGAGATGGAAGTGAAGCTTTCCCAGTCCTCGAGGACCTTTGCATTAAACATTGTCCT AACTTGAGGAAAGCACTACCTTCCCACCTTCCGTCTCTAGAAAGGCTCGAGATTAGAGGATGCCAACAGCTTAGATTGGATTCAGTTTCGTGGGCTTCAA ACATAATTTCAATGAGATTGAAGGACGATACTCGTGATGTATGGCTGGAGATGTTGACCAAGGGGCTGCACCGTCTCCGAGTTCAAGTTGCTCAGGATTT GCTAGATGACCTGGAACTGGTACTTGATCTTTCCAACACTTTACAGGAAATTATGGTCAAGGACTGTAATTCATTTAAGCACCTGCAACTAGAGTTGTTC CCGAAATTGAAAGCTGTTTCCATAAATGGATGTCAAAGTTTAGCATCCCTCTGCAGACCTGACGCGACCTTGGACACTCTGGAGTATCTTAATTTCTTGG AGATATCAAAGTGCCCAAATCTCCTCTCATTTCCTGCAGGACGATTACATGCCCCAGAAATGACCAGGCTCATATTGAGTGATTGTACCAACTTGAAGTC TCTCCCTGCAGGTATGCACTCTCTTCTCCCATCACTAGTGGAGTTGTTCTTGGATAACTGTCCGGAGGTGGAGTCGTTCCCATCAGGTGGGTTACCCCTA AAATTGGAGACACTAATTGTCAATGGATGCGACAAACTCATAGCTGGTTGCAGGAAATGGAATTTACAGTTACTGCCTTGTCTTTTGAGCCTTAGCATTG GGCAGAACAAGGAACTGGAATGTTTACCATTGGAGGAAATGTTGCCATGCACGCTGAACTCTCTCAAAATCAGGAACTTTCAGAATTTGAAGTCTCTAGG TTTCAATCGGATTCAGGGAGGTAAACACATGTCCATAAAAAAGTTGGAATTCAAAGACTGTCCCCTTTTAGAGTTATTCGGGATAGGCAGTATCTTCACC GGTTTAGCATCACTTGAGATCAAAGGTTGCGACAGGCTCATAGCTGGGCGAAGCCAGTGGAATCTGGTAGCAATGTCATCTCTGGAGGAGTTATATTTAA GTACCAACAACAACTTGGAATCCTTTCCGGAAGATATGCATCTGCCTCCAACTCTAACGTCTCTTTACTTGTGGAATCTTCCGAATCTGACGTGCCTAAA CTGCAACAGACTTGAACACCTCACATCTTTTAAAGAACTGAAGATCTCAAACTGTCCGAAGCTGCAGTGTATCCCTGTGGATGGGCTTCCATCATCCCTT TCGTCTGTATACATCAACTAG
AA sequence Show only first row Show all	>Lus10007261 pacid=23165710 polypeptide=Lus10007261 locus=Lus10007261.g ID=Lus10007261.BGIv1.0 annot-version=v1.0 MDVALIGGSFLSAFFQVLFDRMASPEIVNFIRGHKLNHVMMNRLNLMLNSISGVLDDAEEKQISKPSVKRWLDELKDATLEADDLLDEICYEFKRLELGH WGKVRNFISYSSFRDGTNKKLKEILDRLEDLVKQKDVLGLIEGIARNPSFQNRVTTSLPDGSAVYGRKNDVEAIISLLQSNFTASSSNSIGLIPLLGMGG IGKTTIAQLVYKDIRVQQWFELRAWIYVSAEFDVYKVSKDILEEVCGRSCGSTTLNQLQLGLEKAFEGKRCLLVFDDVWHDKSASDWVNLLKPLQSMAPG SMIIATTRNHSVVSALRTVPTIRMFPPYNLQILDDENCWSLFAKTAFGDGYSSAWEKLHGIGREIMKKCNGLPLAAKTLGCLLRADSDVEKWQNILKSNI WDSSNDDILPALILSYHYLPSHLKPCFAYCAMFPKGYEFEKEEVVRLWMAEGFVIQPKGSRVMKDTCEDYFNDLVSRSFLQLTSEHQFCFTMHDLIHDLA KYVAGEFCYRMEDANSFKVAGRTRHLSFARAELDTSIIWEGMYNAKRLRTLLPVDGSKWWSYDPECIDDKVLQNIFLSLTRLRVLSLSGFKVSKLPDAIG ALKHLRYLNLSLVLLHKLPDTLCNLYNLEILVLHKCKNILALPDLIGNLKQLQIMDISGTQITRFPDSFVSLINLCSLDITETTLQEMPLQMSNLSSLRN LTDFVIGAQSGSRIKEMGGLQHLLGSLRIWNLENVLDCQDALDASFKIKKHISRLELRWNGDTNDSLHERGVLENLQPHMNLQHLVIEGYGGTSFPGWIG HSSFSYLLSIELTGCKYCSSLPPLGQLMSLEKLSIKVFEGVVTVGPEFYGSSTFTNKPFRSLKSLKFEQLPEWTDWIAYVGRDGSEAFPVLEDLCIKHCP NLRKALPSHLPSLERLEIRGCQQLRLDSVSWASNIISMRLKDDTRDVWLEMLTKGLHRLRVQVAQDLLDDLELVLDLSNTLQEIMVKDCNSFKHLQLELF PKLKAVSINGCQSLASLCRPDATLDTLEYLNFLEISKCPNLLSFPAGRLHAPEMTRLILSDCTNLKSLPAGMHSLLPSLVELFLDNCPEVESFPSGGLPL KLETLIVNGCDKLIAGCRKWNLQLLPCLLSLSIGQNKELECLPLEEMLPCTLNSLKIRNFQNLKSLGFNRIQGGKHMSIKKLEFKDCPLLELFGIGSIFT GLASLEIKGCDRLIAGRSQWNLVAMSSLEELYLSTNNNLESFPEDMHLPPTLTSLYLWNLPNLTCLNCNRLEHLTSFKELKISNCPKLQCIPVDGLPSSL SSVYIN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G14460			LRR and NB-ARC domains-contain...		Lus10007261 [exp]	0	1
AT2G39950			unknown protein		Lus10040223 [exp]	1.4	0.9508
AT4G38470		STY46	serine/threonine/tyrosine kina...		Lus10023989 [exp]	2.8	0.9334
AT1G17720		ATBBETA, ATB BE...	Protein phosphatase 2A, regula...		Lus10001239 [exp]	6.0	0.9231
AT5G57580			Calmodulin-binding protein (.1...		Lus10001630 [exp]	6.3	0.9298
AT4G09730		RH39	RH39 (.1)		Lus10018946 [exp]	6.6	0.9189
AT3G56680			Single-stranded nucleic acid b...		Lus10027292 [exp]	8.7	0.9298
AT5G46410		SSP4	SCP1-like small phosphatase 4 ...		Lus10004596 [exp]	9.2	0.9152
AT2G30600			BTB/POZ domain-containing prot...		Lus10012262 [exp]	10.4	0.9261
AT2G17020			F-box/RNI-like superfamily pro...		Lus10025093 [exp]	13.3	0.9232
AT5G57655			xylose isomerase family protei...		Lus10006983 [exp]	14.6	0.9334

Compare expression of checked genes

Lus10007261 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.