Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G36930 358 / 4e-104 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) AT5G17680 328 / 6e-93 disease resistance protein (TIR-NBS-LRR class), putative (.1) AT1G27170 320 / 6e-90 transmembrane receptors;ATP binding (.1.2) AT1G69550 318 / 2e-89 disease resistance protein (TIR-NBS-LRR class) (.1) AT1G27180 318 / 5e-89 disease resistance protein (TIR-NBS-LRR class), putative (.1) AT5G46270 307 / 1e-86 Disease resistance protein (TIR-NBS-LRR class) family (.1) AT5G44510 301 / 3e-84 TAO1 target of AVRB operation1 (.1) AT2G16870 293 / 3e-82 Disease resistance protein (TIR-NBS-LRR class) family (.1) AT4G16890 295 / 4e-82 BAL, SNC1 SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1, BALL, disease resistance protein (TIR-NBS-LRR class), putative (.1) AT5G41540 291 / 8e-82 Disease resistance protein (TIR-NBS-LRR class) family (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007814 [exp] 1814 / 0 AT5G36930 373 / 4e-109 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10007808 [exp] 1128 / 0 AT5G36930 418 / 1e-125 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10007811 [exp] 882 / 0 AT5G36930 376 / 1e-110 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10008519 [exp] 841 / 0 AT1G27180 344 / 2e-98 disease resistance protein (TIR-NBS-LRR class), putative (.1) Lus10018658 [exp] 821 / 0 AT1G27180 360 / 4e-106 disease resistance protein (TIR-NBS-LRR class), putative (.1) Lus10004719 [exp] 821 / 0 AT5G36930 384 / 3e-113 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10012311 [exp] 819 / 0 AT5G36930 354 / 6e-103 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10007812 [exp] 814 / 0 AT5G36930 359 / 4e-106 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10007829 [exp] 811 / 0 AT5G36930 330 / 2e-94 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G143300 [exp] 434 / 6e-130 AT5G36930 519 / 2e-162 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T005501 [exp] 414 / 1e-124 AT5G36930 612 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T002200 [exp] 410 / 1e-124 AT5G36930 617 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G017082 [exp] 409 / 2e-123 AT5G36930 638 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T002400 [exp] 401 / 2e-121 AT5G36930 658 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T001933 [exp] 405 / 5e-121 AT5G36930 617 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T011750 [exp] 405 / 6e-121 AT5G36930 551 / 2e-176 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T001500 [exp] 402 / 6e-120 AT5G36930 641 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G021681 [exp] 402 / 7e-120 AT5G36930 641 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.003G014200 [exp] 401 / 1e-119 AT5G36930 673 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0173 [flax] [poplar] STIR PF01582 [flax] [poplar] TIR TIR domain CL0023 [flax] [poplar] P-loop_NTPase PF00931 [flax] [poplar] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Lus10007813 pacid=23143592 polypeptide=Lus10007813 locus=Lus10007813.g ID=Lus10007813.BGIv1.0 annot-version=v1.0 ATGAGGTATATCGGAGGAGCTGTGACTCTGGCTGCACTTGTTTTCCCGATTATCATTCTTTACAAGCTGTGGAGTACGAGGAGAGATTCGACTAGCAACG ATCGTAACAATATCGAAGACCCATTGTCGTCTTCGGTTGTCACCTCTTATGTCATGTTCGACTCGAAAGATTCCCGAAACAACGATGATGATGACAATAT CGTTCGAGAAACGACCAAGTCATCATCTTCCTCCATGATTGATTGTGAAGATTCAAATGATAATATTCACATTGCAATCACTGAACAACCTCCCTGTGCC ACCTCACCTTCAGCATCTCACTCCGAGAGTTCAAACAACATCAACATCACGCAACAACTCGAGTCAACAGGTGATCATCCTGCTACCCCTTCTGCCTTGT TAGATTCCGCCGGCTCAACATCGCTTCCTTCCGTGGAGTACGAGGTTTTCTTGAGCTTCAGAGGCCCAGACACTCGTTACCAGATTACCGATATCCTTTT CCGTTTCCTCGTTCGTTCCAAAATCCACACGTTTAAGGACGACGATGAAATGCGCAAGGGGGAAGGAATATGGCCTTCGTTGGTTAAAGCTATCAGACAG TCTAAAGTTTATGTTCCGATATTGTCGGAGAATTATGCTCATAGCAAATGGTGTCTTAAAGAGCTTGCTGAGATAGTCAAATGTTGCAAACAAGACAGCA GGCGGCTCATACTTCCCATTTTCTATATGGTGGACCCGAGAGACGTACGCCATCAATCCGGACCTTATGGAGTGGCGTTTAAAAAATACGAGGAAATGGT CGGGGAAATGATCGATCCGTCAGATATAGCGACTTGGAGAAACGCTCTAAAGGAGATCGGAACTTTGAAGGGATGGCATGTGAAGAATAGTAAAGAGTGT GTTACCCTTACCCTACCTTGTGCAGCAATATCAGACGATGTTTCTGAAGTCATATGGTCGCATGTAAGCAAGAGCAATGTCTTGTTAGACGATACTGTAG AGTTGGTTGGAGTTGATGATCACGTAAATGCAGTAGTCGAGAGCCTAAGTTTAGACGACTCTGATGAAAGTACAGTGATGGTGGGCATTCACGGCGCTGG TGGTATAGGGAAGACCACACTCGCGACCGAAGTGTACAAAAAGATTTCTGATCGGTTCGACCGATGTAGTTTTCTCGAAAACATAAGAGAAACCCAACAT CATAAAGATGGTACTCTCACTTTGCAAAAGAAGTTAATCTCAAACATTCTGAGGAAGGATTCTATTGTACTCAATGATGCTCATGAAGGAAGGAAACTTC TGAGAGAGAGAGCTTCCCAGTTCAAAATTCTCGTGGTTCTTGACGACGTGGATGATAGTTTCAAATTCGACGAAGTTCTAGGAAACGCAGGAAAGTTTCT TCCGGGGAGTCGATTCATCGCTACTTCTAGGGACACAGGAGTCTTGAGGAGGCTGGACAGAGAAAAATGCAGACTATACGAAGTAAAATATATGGACTCT GATCGGTCTCTTCAGCTCTTCTGCAAACATGCGTTCAGAAAGGATTCTCCCCCGCAAGAGTTTGATGCTTTATCTCGGGATATCGTATCTACCACAGGAG GGCTTCCTTTGACACTTAAAGTTGTGGGATCGCTTTTGTACATGGAAGAGGTCAGCATTTGGAAGGAGAAACTCGAGCAATTGAAAGAGACGACCGAACG ACAGGTGATCGAGAGGTTGAAGATAAGCTATAACTCTCTGGAATATGAAGCACAACAAATATTTCTCGATATTGCATGTTTCTATATCGGATCGGACAAA CAGATTGTTTCCTACATGTGGGCAGATTGCAACTTCCGTCCTGCCATGAACATCAAGATACTTATCCAGAGATCGATGATCAAGATTGACGACGACAATA GATTCCAAATGCATGATCAACTTAGAGATATGGGCAGAGACATTGTACGCTGTGAAAATACAGAGATTCCGTGGAAGAGGAGTAGAATATGGTCTGACCC GGTCATCGAGGAGATGTTACGCAACAAAATGGGAGCACACCATGTCAAGGGCATTAGGCTGAATCATTCACCGCCATCGTTGCTTCGTATTAAGAGCAAA GGTTTCACGAATATGTCAGAGATAAGATATCTCGAGGCATCGAATGTACATTTGAACGGAGACTTCAGCAATCTTCTTCCAAACTTGAGATGGCTTAGCT TGCCCATCGAATTCAGTAACAGACCCCTTGAGCGCCCTACTAATTTATGTATGAGAAATTTGGTGATTCTTGATCTTCGGAGTAACAAGTTTCTAAGCAA TGAATGGGATGGTTGGCACCATATCAAGGAGGCGAGCAGGTTGAAGGTTCTAGACATTTCCTACGCATGTCATTATAATCACTTGAAAGCAATTCCAGAG TTTCCAAAATCTATAGAGATTTTGGATCTTACTGGGTTTGGTCTATCGTCGGTCGGGGAGTTGAACATTGGCAAGTTAACGGAGCTACACGTGTTAAAGA TGAGTCGTAGTTCGATAAGGAAGATCAAGGGCGGGACGATTGGAATGCTTTCCAGGCTTCGAGAGCTCGATGTCGCAGATTGCGAGTGTGAAAATCTTCA AGAGATTCTGGCCAATATCGGAGAATTAACACGTCTCGAAATCCTGAGAACGGTCGGAGAATCGAAAGGTAATCAGGTAGCTCTGGAAGGAATAAAGCAT CTCCCTACAAGTTTGAAAGTCCTCTCCACTTGTTCTCAGGTTCCTAATCTTTCCGACATGTTGGAGTTGAAGACATTATTTGTTAAGAACTGTCCGAACG GGATTGACAACGTCGTCCAAGAAACTAATTACGAGCAGTGGCAGCTGCACTCAAAGTTGCAATCCTTAACACTCGAAGGAACAAAAATAATCAACCATCT CCCGACGACGGCTAGTTTGTCGAGCCTTCAGATTTCCGGTTGCGAAGAGTTAGAGCGGCTGCCGAATAATCTAGCCGGCCTGGAGAGCCTCACTGAATTA GAGGTCACGGGGTGTCCCAAACTACGAGAAATCCGAGGTCTCGGAGGTTTGAAATCATTGGTAACTCTTACCATCATTGATCTTAAAGGCCTAACCCATC TCGACATTTCGAGTCTCCTGATCTCTTTTAATAAGGTACAAAAGTTGACTATAGCAAACTGCCCTCTTCTCGCATCGATGACATTATTCAGCGACAATAA TCGGGACATTGAAATTGTTGACTCGTTGCAAGAACTATGGATCACTGATTGCAAATCCTTGGAACTAGTTGGGAGAGTACTATCACCTCAACTGTCCAAG TTTCCAAAGCTTACCTTTTTGACATTGGGAGGTTTCATCAACTGTGAAGTACTAACTTTTCCAGCAGGTCTGGAAGAGTTAGCTGCATTATGGTTGGCCG ACTTGCCGTCAACCCAGGTGATAAATTTTTTGTCGAAGCTACGAAAGTTGAGGTCCTTACTAATAAGGAATTGCCACAGTTTGCGGGAGATAGAGGGGCT TCCAGAGTGCAAGTCTTTGAATGGTTTACGTCTTGTAGGCTGTACCAGTTTGGAAAAGTTTGAAGTGGCTGGCTTGGAGAATTTGGAGACCCTGCTTATA AGTGGAGGATGCGAAGTGCTGGAGAGGCCTCCTTCGCTCGCGAATCTCCCGAATCTGCGAGAGTTATCCCTCAGACTGTTTAATAATTTACGGGAAATCG GAAACAGTAACATTGCAGATTTGAAGTGTTTGGAAGAATTGAATTTCTATGGGTGTTATGCACTTGAAACATTGCCGGTCGATCAACTGTCTGGTTTGGA TAAATTAAAGAGGCTGGATATTCGAGGATGCTCCAAATTGCGTATCGACGATATTCTTGCCCTTAAGACTATCAGTGACCTGGAAATCAAAGCAGATGAT GAAGTAATCTTGAAGCTAAGAAATCCCACACCACCATTTTTGAAGACCTTGCAAAATTGGTGGTCGTCTTTATAA
AA sequence Show only first row Show all	>Lus10007813 pacid=23143592 polypeptide=Lus10007813 locus=Lus10007813.g ID=Lus10007813.BGIv1.0 annot-version=v1.0 MRYIGGAVTLAALVFPIIILYKLWSTRRDSTSNDRNNIEDPLSSSVVTSYVMFDSKDSRNNDDDDNIVRETTKSSSSSMIDCEDSNDNIHIAITEQPPCA TSPSASHSESSNNINITQQLESTGDHPATPSALLDSAGSTSLPSVEYEVFLSFRGPDTRYQITDILFRFLVRSKIHTFKDDDEMRKGEGIWPSLVKAIRQ SKVYVPILSENYAHSKWCLKELAEIVKCCKQDSRRLILPIFYMVDPRDVRHQSGPYGVAFKKYEEMVGEMIDPSDIATWRNALKEIGTLKGWHVKNSKEC VTLTLPCAAISDDVSEVIWSHVSKSNVLLDDTVELVGVDDHVNAVVESLSLDDSDESTVMVGIHGAGGIGKTTLATEVYKKISDRFDRCSFLENIRETQH HKDGTLTLQKKLISNILRKDSIVLNDAHEGRKLLRERASQFKILVVLDDVDDSFKFDEVLGNAGKFLPGSRFIATSRDTGVLRRLDREKCRLYEVKYMDS DRSLQLFCKHAFRKDSPPQEFDALSRDIVSTTGGLPLTLKVVGSLLYMEEVSIWKEKLEQLKETTERQVIERLKISYNSLEYEAQQIFLDIACFYIGSDK QIVSYMWADCNFRPAMNIKILIQRSMIKIDDDNRFQMHDQLRDMGRDIVRCENTEIPWKRSRIWSDPVIEEMLRNKMGAHHVKGIRLNHSPPSLLRIKSK GFTNMSEIRYLEASNVHLNGDFSNLLPNLRWLSLPIEFSNRPLERPTNLCMRNLVILDLRSNKFLSNEWDGWHHIKEASRLKVLDISYACHYNHLKAIPE FPKSIEILDLTGFGLSSVGELNIGKLTELHVLKMSRSSIRKIKGGTIGMLSRLRELDVADCECENLQEILANIGELTRLEILRTVGESKGNQVALEGIKH LPTSLKVLSTCSQVPNLSDMLELKTLFVKNCPNGIDNVVQETNYEQWQLHSKLQSLTLEGTKIINHLPTTASLSSLQISGCEELERLPNNLAGLESLTEL EVTGCPKLREIRGLGGLKSLVTLTIIDLKGLTHLDISSLLISFNKVQKLTIANCPLLASMTLFSDNNRDIEIVDSLQELWITDCKSLELVGRVLSPQLSK FPKLTFLTLGGFINCEVLTFPAGLEELAALWLADLPSTQVINFLSKLRKLRSLLIRNCHSLREIEGLPECKSLNGLRLVGCTSLEKFEVAGLENLETLLI SGGCEVLERPPSLANLPNLRELSLRLFNNLREIGNSNIADLKCLEELNFYGCYALETLPVDQLSGLDKLKRLDIRGCSKLRIDDILALKTISDLEIKADD EVILKLRNPTPPFLKTLQNWWSSL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G36930			Disease resistance protein (TI...		Lus10007813 [exp]	0	1
AT3G18670			Ankyrin repeat family protein ...		Lus10016672 [exp]	2.8	0.9231
AT5G36930			Disease resistance protein (TI...		Lus10007790 [exp]	3.6	0.9371
AT5G36930			Disease resistance protein (TI...		Lus10007811 [exp]	4.2	0.9257
AT5G36930			Disease resistance protein (TI...		Lus10033953 [exp]	4.7	0.9271
AT4G29230	NAC	ANAC075, NST9	NAC domain containing protein ...		Lus10012927 [exp]	5.3	0.8757
AT2G18196			Heavy metal transport/detoxifi...		Lus10033250 [exp]	6.3	0.9009
AT5G51350		MORE LATERAL GR...	MORE LATERAL GROWTH1, Leucine-...		Lus10036321 [exp]	8.1	0.8844
AT3G01680		SEOR1, SEOb	Sieve-Element-Occlusion-Relate...		Lus10000548 [exp]	8.1	0.9085
AT5G40100			Disease resistance protein (TI...		Lus10000329 [exp]	8.8	0.9062
AT5G36930			Disease resistance protein (TI...		Lus10000331 [exp]	9.2	0.9201

Compare expression of checked genes

Lus10007813 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.