Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G36930 303 / 4e-86 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) AT1G27170 274 / 1e-75 transmembrane receptors;ATP binding (.1.2) AT1G27180 250 / 1e-67 disease resistance protein (TIR-NBS-LRR class), putative (.1) AT5G17680 246 / 1e-66 disease resistance protein (TIR-NBS-LRR class), putative (.1) AT5G41540 223 / 1e-59 Disease resistance protein (TIR-NBS-LRR class) family (.1) AT1G69550 211 / 1e-55 disease resistance protein (TIR-NBS-LRR class) (.1) AT5G41750 209 / 3e-55 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) AT5G44510 206 / 7e-54 TAO1 target of AVRB operation1 (.1) AT1G72840 204 / 1e-53 Disease resistance protein (TIR-NBS-LRR class) (.1), Disease resistance protein (TIR-NBS-LRR class) (.2) AT5G41550 204 / 2e-53 Disease resistance protein (TIR-NBS-LRR class) family (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10004747 [exp] 1086 / 0 AT5G36930 342 / 3e-99 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10007829 [exp] 1071 / 0 AT5G36930 330 / 2e-94 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10012311 [exp] 1043 / 0 AT5G36930 354 / 6e-103 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10007821 [exp] 980 / 0 AT5G36930 339 / 4e-98 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10033953 [exp] 957 / 0 AT5G36930 347 / 2e-102 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10040576 [exp] 941 / 0 AT1G27180 355 / 3e-103 disease resistance protein (TIR-NBS-LRR class), putative (.1) Lus10007825 [exp] 930 / 0 AT5G36930 318 / 2e-89 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10000423 [exp] 875 / 0 AT1G27180 338 / 5e-95 disease resistance protein (TIR-NBS-LRR class), putative (.1) Lus10007808 [exp] 832 / 0 AT5G36930 418 / 1e-125 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.T002200 [exp] 354 / 9e-106 AT5G36930 617 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G052000 [exp] 357 / 7e-105 AT5G36930 641 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G017082 [exp] 348 / 1e-102 AT5G36930 638 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T002400 [exp] 341 / 6e-101 AT5G36930 658 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G016425 [exp] 345 / 1e-100 AT5G36930 650 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T002066 [exp] 344 / 1e-100 AT5G36930 631 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G021681 [exp] 342 / 1e-99 AT5G36930 641 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.003G014200 [exp] 340 / 4e-99 AT5G36930 673 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T001500 [exp] 340 / 5e-99 AT5G36930 641 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T001933 [exp] 339 / 1e-98 AT5G36930 617 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0173 [flax] [poplar] STIR PF01582 [flax] [poplar] TIR TIR domain CL0023 [flax] [poplar] P-loop_NTPase PF00931 [flax] [poplar] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Lus10007831 pacid=23143585 polypeptide=Lus10007831 locus=Lus10007831.g ID=Lus10007831.BGIv1.0 annot-version=v1.0 ATGAATTACATAACGGGAACTGCGGCCGTTATTGCGATCATCGTCTTCTACAAGTTGTTTTGGGAGAGAAGGAGAAGTTCTGAGGACGACTCGGATAATA GTACACCCCAACAATCGGATTCTACAAGAATTTCTTCTGGAACCGCCGACTCTGGGAATTCCAATACGGTGTCTCTTCCGGCCGGGGAATATGAGGTGTT TTTGAGTTTCAGAGGTCCGGATACGCGCAATCATATTACTGACATTCTTTATCGTTTTCTCGCTCACTTAAAGATCCGCACGTTTAGAGATGACGATGAG CTCCGTAAGGGAGAAGGGATAGGGCCTAACCTTGTTCGAGCGATTGGTCAGTCAAAAATTTATGTTCCGATTATATCGGAGCATTATGCTCATAGCAAGT GGTGTCTTAACGAACTTGTTGAAATTGTTAAGCACCATAAGCAAGACAGAGGACGCATAATACTTCCCATTTTCTATATGGTGGATCCGAGAGACGTGCG TCATCAAACGGGGTACCAAAGTGCGTTTCGACAGCACAAAAAGAAGATGTTCGGTGAAAAGACAATACAGGACTGGAAAGACACTTTGAATGAGCAACGG ATGAGTTGGTCGGATGACCACATAGAACAAGTGGTAAATAGGCTAAGTCTTGGGTCACAAGGTGTGAATGTAGTTGGCATCCATGGTATTGGGGGTATTG GCAAGACTACTCTTGCAGCAGCAGCCTATAACAAAATCTCGGCGTACTTTGATCGTTGTAGTTTCGTGGAAAATATACGAGAAACACAACAGCAAAGTGA CGGTATTCTCGTTTTACAGAAAAAACTAATCTCTAATATCCTTAAGATGGACACCGTTGGGTCAATTGTTGACATCAACGAAGGGAAGAGAATTATAAGG GAGAGGGTTTCTCAATTCAAAATCCTTGTAGTTCTGGATGATGTGGACGATAAGTTTAAATTCGAAGAGCTCTTAGGAAATTTTGACAAGTTTGTTTCGG GAAGTCGATTTATCATTACTTCTAGAAACATTAAAATTTTAAGAAGCCTAAGTAAAGATCCACACAACTTGTATGAAGTTGAAGCGATGGATATGGATCG CTCGCTTAAGCTGTTTTGCAAGCATGCTTTCAGAAAGGATTTCCCTCTCCTTGGTTTCGAGGCCTTATCGCAAGATATAGTGTCCACAGCAGGAGGACTT CCATTAACACTTAAGGTTGTAGGCTCGCTTCTTTTCCTAGAAGAAGAAATTGTTTGGAAAGACAAATTGAAGCAGTTGAGAAAATGTCCAGAGGAAGAGG TGATGAAAAGATTAATGATTAGTTATAATGGATTGGGATACGAAGCACAACAAATATTTTTAGATATTGCTTGTTTCTATATTGGAACTGATAAAGAAAT CCCTTCTTACATGTGGAGCGATTGTAATTTTCATCCCATCAGTAACATTAACCTGCTAGTTCAAAGGTCCATGGTCAAGATTGCAAATGATGATATGTTT CAAATGCATGATCAACTTAGAGATATGGGGAGAGAAATTGTCCGCGAAGAATGTATAGAACATCCTTGGATGAGAAGCAGAATATGGTCTGATGAGGAAG CTGTCGAGCTACTACTTGACAACAAGGGAACAAAGCAAGTTAAAGCTATTAGAGTAAACTCTTCGGATTCTATTATTTCGGAGCTCGAAGGTGGATGTTT CACGAATTTGTCGGAGTTGAGATATTTTCATGCAAAGGCAACACAGTATGAGGCAACAAAGTTGAATGGAGACTTCAGTAATCTTCTCCCAAACCTAAAA TGGATACAAGTAGAAGGCTCTCATCGAAGTCCCGTATTCAATGCGAAAAACTTGACAATATTCGATGTCCCCTCGGTAGGCAATGACATGGAAAGTTGCA GTAAATTCAAGGAAACAAACAAGTTGAAAGTTTTGAAACTTTCGAATTGCGAAGAGATGACTAGACTCCCAGATTTTCCGAAATCCGGGAGCCTTGAAAT GTTAAACATCAAGAAATTCAAGCAGAAGGGTGAAGATGTAGAAATTGGGAAACTGTGGAACCTTAAAGTACTGAAATTATGGGGTTGTGATCTACGAAAG ATCAAAGGTGGCACCATTGGGACGACGATGCAGGGTCTTCGGAAGCTCAATCTAGACTACATCGATTGCGATTATGATAATTTGAGACAGGTGCTTTCCG ACGTAGAAAAACTGCCGTCCCTCAAAATCTTGAGTATGAAAAATGATTTCTTGGTGGATGTTCTGAATGGGATCAAGCTACCACCGAGTTTGAAGCTGCT CAATTCGTCATCCGGCTTCGAGAATCTTGTGGAGCTGCTGGATTTAGAGGAATTCGCCGTCTGTGGGAGTCCAAGGACGACGGAACTTGTGATACCGCCA TTTCCGTGGAGTAAATCCTCAAAGTTGAAAACGATAATGTTCATGAAGATGAAGAGGATAATCATGGTTGACAGTACTAAGAACAGTACCATGCTACCAT CATCACTTAACAGGCTGGAAATGAAAGATATAGGATCAGAACGAATCCCGAATCTGAAAAATCTAAGCAACTTGATCGAGCTGAAAATCTGGGGTTGTAC TAACCTACAGGAGGTCCAAGGCCTTGCTGGGCTGAAATCATTACAGATTCTCAGGATAGGGTACGCCGATAAATTAACTCGTATCAACGGCCTGGGGAAT CTCATGTCTTCTTCTTCTCCCAGTTTGAAAGAGTTAAACATACACCATTGCCCACTTCTTCAAGCAGTACTAACATTAGAACAAGGCGAAAACGACGATG GAAGACAGGAGAAAGCAGTTGATCATCAAATCGCGTCTTTACTCACAATCGAAATCCATGGAAACCGATTCATGGATGGTAGATCCATTCCCAGGTTGTC CAAGTTTCCAATGCTTAAGACGCTGAAAATCATGGAAATCAGTTTAAACATCGACGACGACGAGGAAGAATATCAGCTTCTGGAAGGGCTCGAAAACCTC GAAGAGTTAGACTTCTTGCATCTATCCAGTTTACCGAAAGTGCAACGACTGCCTTCGTTGTCCAACCTAAGGAAGCTGACCATCTTAATCTTGGCGGAGC TTCCAGGTTTGCGGGAGATTGCGGGGCTTAGTAATTTGAAGTCGCTAAAAAGTTTAACTGTGTCTAAGTGCTATGCTCTCGAAAGATTTCCCGTCGCGGA TCTACCCTACTTTCACATGGAGCGTATAGTGCTGGGCTTGGAAGGATGCAAAAACTTCGTTAATGTTCATTCTGATCTTGCTCCTCTAACCACAGAAGGA GTTGATCTTGTTAAACTTAAAACTCTATACATCAAGTGGCCACAGAATAACGACTGCGAAAGTTAG
AA sequence Show only first row Show all	>Lus10007831 pacid=23143585 polypeptide=Lus10007831 locus=Lus10007831.g ID=Lus10007831.BGIv1.0 annot-version=v1.0 MNYITGTAAVIAIIVFYKLFWERRRSSEDDSDNSTPQQSDSTRISSGTADSGNSNTVSLPAGEYEVFLSFRGPDTRNHITDILYRFLAHLKIRTFRDDDE LRKGEGIGPNLVRAIGQSKIYVPIISEHYAHSKWCLNELVEIVKHHKQDRGRIILPIFYMVDPRDVRHQTGYQSAFRQHKKKMFGEKTIQDWKDTLNEQR MSWSDDHIEQVVNRLSLGSQGVNVVGIHGIGGIGKTTLAAAAYNKISAYFDRCSFVENIRETQQQSDGILVLQKKLISNILKMDTVGSIVDINEGKRIIR ERVSQFKILVVLDDVDDKFKFEELLGNFDKFVSGSRFIITSRNIKILRSLSKDPHNLYEVEAMDMDRSLKLFCKHAFRKDFPLLGFEALSQDIVSTAGGL PLTLKVVGSLLFLEEEIVWKDKLKQLRKCPEEEVMKRLMISYNGLGYEAQQIFLDIACFYIGTDKEIPSYMWSDCNFHPISNINLLVQRSMVKIANDDMF QMHDQLRDMGREIVREECIEHPWMRSRIWSDEEAVELLLDNKGTKQVKAIRVNSSDSIISELEGGCFTNLSELRYFHAKATQYEATKLNGDFSNLLPNLK WIQVEGSHRSPVFNAKNLTIFDVPSVGNDMESCSKFKETNKLKVLKLSNCEEMTRLPDFPKSGSLEMLNIKKFKQKGEDVEIGKLWNLKVLKLWGCDLRK IKGGTIGTTMQGLRKLNLDYIDCDYDNLRQVLSDVEKLPSLKILSMKNDFLVDVLNGIKLPPSLKLLNSSSGFENLVELLDLEEFAVCGSPRTTELVIPP FPWSKSSKLKTIMFMKMKRIIMVDSTKNSTMLPSSLNRLEMKDIGSERIPNLKNLSNLIELKIWGCTNLQEVQGLAGLKSLQILRIGYADKLTRINGLGN LMSSSSPSLKELNIHHCPLLQAVLTLEQGENDDGRQEKAVDHQIASLLTIEIHGNRFMDGRSIPRLSKFPMLKTLKIMEISLNIDDDEEEYQLLEGLENL EELDFLHLSSLPKVQRLPSLSNLRKLTILILAELPGLREIAGLSNLKSLKSLTVSKCYALERFPVADLPYFHMERIVLGLEGCKNFVNVHSDLAPLTTEG VDLVKLKTLYIKWPQNNDCES

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G27180			disease resistance protein (TI...		Lus10007831 [exp]	0	1
AT5G36930			Disease resistance protein (TI...		Lus10007852 [exp]	2.4	0.9759
AT5G36930			Disease resistance protein (TI...		Lus10010987 [exp]	3.2	0.9716
AT1G13920			Remorin family protein (.1)		Lus10004665 [exp]	5.7	0.9703
AT2G20362			unknown protein		Lus10024963 [exp]	6.3	0.9543
AT1G35470			SPla/RYanodine receptor (SPRY)...		Lus10009316 [exp]	6.3	0.9657
AT5G67360		ARA12	Subtilase family protein (.1)		Lus10006306 [exp]	6.9	0.9410
					Lus10037173 [exp]	6.9	0.9583
AT5G36930			Disease resistance protein (TI...		Lus10004726 [exp]	7.4	0.9613
AT2G40200	bHLH	bHLH051	basic helix-loop-helix (bHLH) ...		Lus10007502 [exp]	7.7	0.8966
AT1G76770			HSP20-like chaperones superfam...		Lus10028577 [exp]	8.5	0.9575

Compare expression of checked genes

Lus10007831 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.