Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G10960 731 / 0 ATAZG1 AZA-guanine resistant1 (.1) AT5G50300 473 / 3e-162 ATAZG2 ARABIDOPSIS THALIANA AZA-GUANINE RESISTANT2, Xanthine/uracil permease family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025246 [exp] 1040 / 0 AT3G10960 780 / 0.0 AZA-guanine resistant1 (.1) Lus10030548 [exp] 709 / 0 AT3G10960 881 / 0.0 AZA-guanine resistant1 (.1) Lus10012895 [exp] 696 / 0 AT3G10960 873 / 0.0 AZA-guanine resistant1 (.1) Lus10040894 [exp] 472 / 4e-162 AT5G50300 691 / 0.0 ARABIDOPSIS THALIANA AZA-GUANINE RESISTANT2, Xanthine/uracil permease family protein (.1) Lus10034287 [exp] 63 / 3e-12 AT5G50300 91 / 1e-22 ARABIDOPSIS THALIANA AZA-GUANINE RESISTANT2, Xanthine/uracil permease family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G133800 [exp] 736 / 0 AT3G10960 847 / 0.0 AZA-guanine resistant1 (.1) Potri.013G083300 [exp] 730 / 0 AT3G10960 903 / 0.0 AZA-guanine resistant1 (.1) Potri.015G090000 [exp] 509 / 1e-176 AT5G50300 736 / 0.0 ARABIDOPSIS THALIANA AZA-GUANINE RESISTANT2, Xanthine/uracil permease family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0062 [flax] [poplar] APC PF00860 [flax] [poplar] Xan_ur_permease Permease family
Representative CDS sequence Show only first row Show all	>Lus10009102 pacid=23172406 polypeptide=Lus10009102 locus=Lus10009102.g ID=Lus10009102.BGIv1.0 annot-version=v1.0 ATGGTGATGGAAAACGCAGCCACTCAAGAGGTTCACATCTCAATCTTGGCAAAGCTCAACGCCTACGTGGCAGCAAGCAGAGTCGGGAAACGATTCAAGC TCGTCGAGCGGAACACCTCCTTCACCACCGAGCTTCGAGCCGGCACCGCCACGTTCCTAACCATGGCGTACATCCTCGCCGTCAACGCCAGCATCCTCGC CGACTCCGGCGGCACCTGCACAATCGCCGACTGCATACCACCCGGTACCGACCACGACCACTCCTGTAAATTCTCCCACATAGTCAACCCTGGCTACCTC GATTGCGTTGAACAGACCCGTAAGGATCTAATAGTCGCCACGATTGTTTCTTCTTTAGTCGGCTGCTTCATAATGGGAATGTTCGCGAATCTTCCTCTGG CTCTGGCTCCAGGAATGGGCACCAACGCCTATTTCGCCTACACGGTGGTCGGATACCACGGATCCGGCTACCTATCCTACGAGCACGCCCTCACCGCTGT ATTCATCGAGGGTTTGATCTTCCTCTTCTTTTCCGCCTTCGGTTTACGCGCCAGGTTGGCGAAATTCGTCCCCAAGCCGGTTCGGGTCAGCTGCTCCGCC GGAATCGGGTTGTTCCTCGCGTTCGTCGGGTTACAGAGCAACCAAGGAATCGGATTAGTTGGGTACAGCTCATCAACATTGGTCACCATCGGTGCGTGCC CGAGATCCTCGCAAGTCGCGTTAGCTCCCGTTAAGATTATTAACGGCACCGTTACTCTAATCCCTAACGGAATCATCTCCGACGAGTTCCTCTGCGAGAG TGGACGGATGGAGAGCCCCACGTTTTGGCTGGGAATTGTCGGATTCGTTATAATCGCTTACTGTTTAGTCAAGAACATCAAAGGAGCATTGATCTACGGC GTCGTCTTGGTCACCGTCTTGTCTTGGATCCGTAACACTCCGATCACGGCGTTCCCAAACACCGAGACCGGTAACCAGGAGTACGAGTACTTCAAGGCGG GGGTCGACATCCACTCGATTCAACGAACCGCCGGAGTGTTGGAATTTAACGGAATGGGGACGGCGAACTTCTGGCAAGCTTTAGCGACTTTTTTATACGT TGACATTTTGGACACGACAGGGACGCTTTACTCGATGGCGGAGTTTGCAAAACTAACGGACGCCAACGGAGATTTCGAAGGTCAGTACTTCGCGTTTATG TCTGACGCGGCTTCCATCGTGGTGGGGTCGTTACTTGGGACGTCGTCGGTGACGACTTTTGTGGAATCATCGACGGGGATACGGGAAGGTGGAAGGACGG GCTTGACGGCGTTAACAGTGGCGGGGTATTTTTTCTTGGCCTTCTTCTTTACGCCGTTATTGGCGTCGATCCCTGCGTGGGCTGTGGGTCCACCGTTGAT ATTGGTCGGGGTTTTGATGATGAGGCCGGTGATGGAGATCGAGTGGGACAACATGAAACAGGCGATCCCGGCGTTTGTGACGATGATATTGATGCCACTA ACGTATTCGATAGCATACGGTTTGTTGGGTGGGATTGGGACTTTTGTTGTTTTACATGTATGGGACTGGGGTGTGGCAGTTTGGTTGAAGTTGACGAAGC TGATTGGGATGGTGGTCGGAGGAAAGAATGTTGTGAAGGAGGAAACGGCGGTGGGTGGGAAGCCGGCCAGTGGGCGGCAGAATGGTAAAAGAATTCAAGT TTAG
AA sequence Show only first row Show all	>Lus10009102 pacid=23172406 polypeptide=Lus10009102 locus=Lus10009102.g ID=Lus10009102.BGIv1.0 annot-version=v1.0 MVMENAATQEVHISILAKLNAYVAASRVGKRFKLVERNTSFTTELRAGTATFLTMAYILAVNASILADSGGTCTIADCIPPGTDHDHSCKFSHIVNPGYL DCVEQTRKDLIVATIVSSLVGCFIMGMFANLPLALAPGMGTNAYFAYTVVGYHGSGYLSYEHALTAVFIEGLIFLFFSAFGLRARLAKFVPKPVRVSCSA GIGLFLAFVGLQSNQGIGLVGYSSSTLVTIGACPRSSQVALAPVKIINGTVTLIPNGIISDEFLCESGRMESPTFWLGIVGFVIIAYCLVKNIKGALIYG VVLVTVLSWIRNTPITAFPNTETGNQEYEYFKAGVDIHSIQRTAGVLEFNGMGTANFWQALATFLYVDILDTTGTLYSMAEFAKLTDANGDFEGQYFAFM SDAASIVVGSLLGTSSVTTFVESSTGIREGGRTGLTALTVAGYFFLAFFFTPLLASIPAWAVGPPLILVGVLMMRPVMEIEWDNMKQAIPAFVTMILMPL TYSIAYGLLGGIGTFVVLHVWDWGVAVWLKLTKLIGMVVGGKNVVKEETAVGGKPASGRQNGKRIQV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G10960		ATAZG1	AZA-guanine resistant1 (.1)		Lus10009102 [exp]	0	1
					Lus10013331 [exp]	6.6	0.8363
AT4G36930	bHLH	SPT, bHLH024	SPATULA, basic helix-loop-heli...		Lus10038020 [exp]	7.1	0.8625
AT5G55710		AtTic20-V	translocon at the inner envelo...		Lus10031781 [exp]	8.9	0.8087
AT5G48485		DIR1	DEFECTIVE IN INDUCED RESISTANC...		Lus10039511 [exp]	15.7	0.8501
AT1G06460		ACD31.2, ACD32....	ALPHA-CRYSTALLIN DOMAIN 31.2, ...		Lus10007366 [exp]	16.5	0.8548
AT5G48500			unknown protein		Lus10009584 [exp]	17.5	0.8156
AT2G04570			GDSL-like Lipase/Acylhydrolase...		Lus10015162 [exp]	23.7	0.8316
AT1G78955		CAMS1	camelliol C synthase 1 (.1)		Lus10016442 [exp]	24.2	0.7951
AT5G59320		LTP3	lipid transfer protein 3 (.1)		Lus10026418 [exp]	30.1	0.8106
AT1G21270		WAK2	wall-associated kinase 2 (.1)		Lus10013384 [exp]	32.2	0.8168

Compare expression of checked genes

Lus10009102 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.