Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G44750 420 / 8e-147 ATPUP11 purine permease 11 (.1.2.3) AT4G08700 332 / 3e-112 ATPUP13 Drug/metabolite transporter superfamily protein (.1) AT5G41160 311 / 4e-104 ATPUP12 ARABIDOPSIS THALIANA PURINE PERMEASE 12, purine permease 12 (.1) AT4G18220 301 / 3e-100 Drug/metabolite transporter superfamily protein (.1) AT4G18210 301 / 6e-100 ATPUP10 purine permease 10 (.1) AT4G18195 259 / 3e-83 ATPUP8, AT4G18200 ARABIDOPSIS THALIANA PURINE PERMEASE 8, purine permease 8 (.1) AT4G18205 244 / 6e-78 AT4G18200 Nucleotide-sugar transporter family protein (.1) AT4G18197 239 / 1e-75 PEX17, ATPUP7, AT4G18200 PEROXIN 17, ARABIDOPSIS THALIANA PURINE PERMEASE 7, purine permease 7 (.1) AT4G18190 237 / 5e-75 ATPUP6 purine permease 6 (.1) AT1G28220 179 / 4e-53 ATPUP3 purine permease 3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10043350 [exp] 589 / 0 AT1G44750 456 / 8e-161 purine permease 11 (.1.2.3) Lus10026130 [exp] 269 / 3e-87 AT4G18210 382 / 2e-131 purine permease 10 (.1) Lus10008689 [exp] 267 / 1e-86 AT4G18210 382 / 3e-131 purine permease 10 (.1) Lus10040118 [exp] 264 / 2e-85 AT4G18210 336 / 2e-113 purine permease 10 (.1) Lus10030927 [exp] 264 / 3e-85 AT4G18210 336 / 1e-113 purine permease 10 (.1) Lus10028132 [exp] 246 / 8e-78 AT4G18220 361 / 4e-123 Drug/metabolite transporter superfamily protein (.1) Lus10038492 [exp] 238 / 6e-75 AT4G18210 344 / 3e-116 purine permease 10 (.1) Lus10020950 [exp] 161 / 8e-46 AT1G28220 448 / 3e-158 purine permease 3 (.1) Lus10020416 [exp] 154 / 2e-43 AT1G28220 341 / 2e-116 purine permease 3 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G043900 [exp] 454 / 5e-160 AT1G44750 434 / 2e-152 purine permease 11 (.1.2.3) Potri.001G147600 [exp] 317 / 4e-106 AT4G18210 315 / 7e-105 purine permease 10 (.1) Potri.001G352100 [exp] 300 / 2e-99 AT4G18210 398 / 1e-137 purine permease 10 (.1) Potri.001G352200 [exp] 281 / 6e-92 AT4G18220 315 / 1e-105 Drug/metabolite transporter superfamily protein (.1) Potri.005G160300 [exp] 167 / 2e-48 AT1G28220 413 / 8e-145 purine permease 3 (.1) Potri.002G099600 [exp] 147 / 9e-41 AT1G28220 229 / 2e-72 purine permease 3 (.1) Potri.006G184900 [exp] 142 / 9e-39 AT2G24220 404 / 6e-141 purine permease 5 (.1.2) Potri.003G156900 [exp] 132 / 1e-34 AT1G30840 323 / 4e-108 purine permease 4 (.1.2) Potri.001G074100 [exp] 114 / 2e-28 AT1G30840 303 / 5e-101 purine permease 4 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0184 [flax] [poplar] DMT PF03151 [flax] [poplar] TPT Triose-phosphate Transporter family
Representative CDS sequence Show only first row Show all	>Lus10019503 pacid=23181616 polypeptide=Lus10019503 locus=Lus10019503.g ID=Lus10019503.BGIv1.0 annot-version=v1.0 ATGGCTGATAATCAGCAACCGATCCTGAGCAAGAATGGCAACACAGGGCAGCCACCGTTACTTAAAAAACTCAAGCGCTGGCAATGGTGGCTTCTAGTGT CTATCAACATCTTCTTCCTCGTCGCAGGCCAGTGTGCTGCTGTTCTCCTTGGAAGATTCTACTATGACCAGGGTGGGAACAGCAAATGGTTAGCAACTCT TGTTCAAACTGCTGCCTTCCCAATTCTCTACATCCCATTCCTGCTAATTCCTTCTTCTCAAGAGGAGCCTTCAAATGCCACCTCATCATCATCCTCTTCT TCGCCTTCTCTCAAAGTTCTTGCTTCCATCTACTTCGTCCTTGGAGTAATCATAGCTTGCGACAACATGCTGTACTTCATCGGCCTACTCCACCTCTCAG CTTCCACCTACTCCTTGATATGCGCTTCCCAATTGGCATTCAACGCCATCTTCTCCTACTTCCTCAACTCACAAAAATTCACTTCCTTAATCCTCAACTC CATAGCCATGCTCTCCTTCTCCTCCGCTCTCATAGCAATGAACGACAGCTCTGACGACGAACCATCGGGGAAATCCAAGCTGAAGTATACAATTGGTTTC ATCTCCACATTGGCTGCTTCGGCATTGTACTCGCTCATTCTCTCCCTGATGCAGCTATCCTTTCAGAGGGTCATAAAGAAAGAGACTTTCGCCGTGGTGT TGGAGATGCAAATTTACACATCCCTCGTCGCTACATGTGTCGCCATTATGGGTCTCTTTGCGAGCGGGGAGTGGAAGACGCTGCACGGGGAAATGGGGAG TTACGGGAAAGGTAGTGCTTCGTACGTGTTGACGCTGGTTTGGACGGCGGTGACGTGGCAGGTTTGTTCTGTCGGCGTTGTGGGTTTGATATTTGTGGTG TCGTCGTTGTTTTCAAATGTGATAAGCACGGTGGCGTTGGCTGTGTCTCCGATCTCGGCGGTGATCGTTTTCGGGGACAAGATGAATGGGGTGAAGGTGG TTGCTTTGCTGATGGCAGTGTGGGGGTTTGGTTGTTATAGTCGGCAGAATTATGAGGATGAACGTGAGATTAGGAAGACAGCAGAGGATGCTGCTGCTGC TGCTACTGGGGAAGCTGGTGGTGGTCGTTTGTGTTAA
AA sequence Show only first row Show all	>Lus10019503 pacid=23181616 polypeptide=Lus10019503 locus=Lus10019503.g ID=Lus10019503.BGIv1.0 annot-version=v1.0 MADNQQPILSKNGNTGQPPLLKKLKRWQWWLLVSINIFFLVAGQCAAVLLGRFYYDQGGNSKWLATLVQTAAFPILYIPFLLIPSSQEEPSNATSSSSSS SPSLKVLASIYFVLGVIIACDNMLYFIGLLHLSASTYSLICASQLAFNAIFSYFLNSQKFTSLILNSIAMLSFSSALIAMNDSSDDEPSGKSKLKYTIGF ISTLAASALYSLILSLMQLSFQRVIKKETFAVVLEMQIYTSLVATCVAIMGLFASGEWKTLHGEMGSYGKGSASYVLTLVWTAVTWQVCSVGVVGLIFVV SSLFSNVISTVALAVSPISAVIVFGDKMNGVKVVALLMAVWGFGCYSRQNYEDEREIRKTAEDAAAAATGEAGGGRLC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G44750		ATPUP11	purine permease 11 (.1.2.3)		Lus10019503 [exp]	0	1
AT1G44750		ATPUP11	purine permease 11 (.1.2.3)		Lus10043350 [exp]	1.7	0.7701
AT3G01720			unknown protein		Lus10014878 [exp]	6.7	0.6950
AT2G01080			Late embryogenesis abundant (L...		Lus10036163 [exp]	11.0	0.7141
AT5G45800		MEE62	maternal effect embryo arrest ...		Lus10007287 [exp]	11.0	0.6947
AT1G29220			transcriptional regulator fami...		Lus10007288 [exp]	11.7	0.6211
AT2G32440		ATKAO2, CYP88A4...	ARABIDOPSIS ENT-KAURENOIC ACID...		Lus10000026 [exp]	13.6	0.7115
					Lus10002271 [exp]	15.2	0.6712
AT5G16530		PIN5	PIN-FORMED 5, Auxin efflux car...		Lus10020193 [exp]	18.2	0.6582
AT5G42850			Thioredoxin superfamily protei...		Lus10023026 [exp]	20.2	0.6527
AT1G31770		ABCG14	ATP-binding cassette G14, ATP-...		Lus10035692 [exp]	22.2	0.6611

Compare expression of checked genes

Lus10019503 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.