Gene [FLAX] | FIBexDB

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Symbol

Arabidopsis homologues

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Locus ID	BLAST score/e-value	Alias	TAIR10 short description
AT4G33300	533 / 1e-169	ADR1-L1	ADR1-like 1 (.1.2)
AT5G04720	518 / 3e-164	PHX21, ADR1-L2	PHOENIX 21, ADR1-like 2 (.1)
AT5G47280	497 / 7e-159	ADR1-L3	ADR1-like 3 (.1)
AT1G33560	488 / 3e-153	ADR1	ACTIVATED DISEASE RESISTANCE 1, Disease resistance protein (CC-NBS-LRR class) family (.1)
AT5G66900	242 / 2e-66		Disease resistance protein (CC-NBS-LRR class) family (.1)
AT5G66910	235 / 4e-64		Disease resistance protein (CC-NBS-LRR class) family (.1)
AT5G66890	142 / 6e-36		Leucine-rich repeat (LRR) family protein (.1)
AT3G07040	108 / 2e-23	RPS3, RPM1	RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1)
AT3G50950	103 / 5e-22	ZAR1	HOPZ-ACTIVATED RESISTANCE 1 (.1.2)
AT5G43470	98 / 3e-20	HRT, RCY1, RPP8	RECOGNITION OF PERONOSPORA PARASITICA 8, RESISTANT TO CMV\(Y\) 1, HYPERSENSITIVE RESPONSE TO TCV, Disease resistance protein (CC-NBS-LRR class) family (.1), Disease resistance protein (CC-NBS-LRR class) family (.2)

Paralogs

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Gene ID	BLAST score/e-value	At best hit	BLAST score/e-value	TAIR10 short description
Lus10032759 [exp]	659 / 0	AT1G33560	543 / 0.0	ACTIVATED DISEASE RESISTANCE 1, Disease resistance protein (CC-NBS-LRR class) family (.1)
Lus10022464 [exp]	265 / 6e-74	AT5G66900	531 / 2e-177	Disease resistance protein (CC-NBS-LRR class) family (.1)
Lus10020779 [exp]	213 / 5e-57	AT5G66900	434 / 5e-141	Disease resistance protein (CC-NBS-LRR class) family (.1)
Lus10007359 [exp]	202 / 5e-53	AT5G66900	473 / 3e-154	Disease resistance protein (CC-NBS-LRR class) family (.1)
Lus10034761 [exp]	111 / 8e-25	AT5G66900	197 / 1e-54	Disease resistance protein (CC-NBS-LRR class) family (.1)
Lus10002945 [exp]	105 / 2e-22	AT3G07040	580 / 0.0	RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1)
Lus10022351 [exp]	103 / 9e-22	AT3G14470	369 / 1e-108	NB-ARC domain-containing disease resistance protein (.1)
Lus10005218 [exp]	103 / 9e-22	AT3G14470	379 / 2e-113	NB-ARC domain-containing disease resistance protein (.1)
Lus10028639 [exp]	98 / 3e-20	AT3G07040	579 / 0.0	RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1)

Poplar homologues

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Locus ID	BLAST score/e-value	At best hit	BLAST score/e-value	TAIR10 short description
Potri.002G129300 [exp]	740 / 0	AT4G33300	902 / 0.0	ADR1-like 1 (.1.2)
Potri.014G035700 [exp]	739 / 0	AT4G33300	889 / 0.0	ADR1-like 1 (.1.2)
Potri.007G039100 [exp]	268 / 2e-75	AT5G66900	474 / 3e-156	Disease resistance protein (CC-NBS-LRR class) family (.1)
Potri.007G039300 [exp]	248 / 2e-68	AT5G66900	540 / 0.0	Disease resistance protein (CC-NBS-LRR class) family (.1)
Potri.007G038700 [exp]	241 / 3e-66	AT5G66900	481 / 3e-158	Disease resistance protein (CC-NBS-LRR class) family (.1)
Potri.007G039000 [exp]	228 / 8e-63	AT5G66900	343 / 2e-107	Disease resistance protein (CC-NBS-LRR class) family (.1)
Potri.007G038900 [exp]	174 / 6e-47	AT5G66900	336 / 4e-108	Disease resistance protein (CC-NBS-LRR class) family (.1)
Potri.017G127200 [exp]	114 / 5e-25	AT3G14470	404 / 4e-123	NB-ARC domain-containing disease resistance protein (.1)
Potri.006G271800 [exp]	110 / 4e-24	AT3G14470	345 / 7e-102	NB-ARC domain-containing disease resistance protein (.1)
Potri.017G128000 [exp]	109 / 1e-23	AT3G14470	435 / 6e-135	NB-ARC domain-containing disease resistance protein (.1)

PFAM info

Clan ID	Clan name	Pfam ID	Pfam name	Pfam description
CL0023 [flax] [poplar]	P-loop_NTPase	PF00931 [flax] [poplar]	NB-ARC	NB-ARC domain

Representative CDS sequence

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>Lus10021769 pacid=23154327 polypeptide=Lus10021769 locus=Lus10021769.g ID=Lus10021769.BGIv1.0 annot-version=v1.0

ATGAAGATTGGTGTCGGCGGCGGCGGAGGAGGTTGGGTGGGGGAGGCGGTGAAGAGAGTGGATATGGAGGAGCAGCGGTGGGAGGGTAATGTGATAAATG

CGTTGGGGGTTGGGATGGCTGAAGGGAAGACGAGAGTGAAGGAGATGGTGATTGAGAGGGATGAATTAGAGATTGTTGGAATTTGCGGGATTGGAGGCTC

TGGGAAGACTACTCTTGCTACTGATGTATGCAGAGACGATCAGGTTAAATTCCACTTCAAGAACAGGATACTTTTCCTGACGGTTTCGCAGTCCCCTGAT

GTAGAGCAGCTGAGGGCTAAAATTCGGGGGTTTATTACAGAAGGTGATGATATCAATTTTGGCCGCAAAGACGGGCTCTCAGAAGATGGATTGGAAGACG

GAGGTCGAGTTTTGATTGTTCTAGACGATGTCTGGTCTCTCTCGGTGCTTGAGCAGTTGATTTTTAGGGTTCATGGATGCAAAACCCTTGTCGTCTCGCG

ATTCAAGTTCCCGAATGTGCTTAAAGCTACTTATGAAGTGGAGCTGCTGAAGGGAGATGAAGCAATTTCCTTGTTCTTCCAATCTGCTTTTGAACAGTGT

TCTATCCCTCCTGGTACCGATGCAAGCTTGGTCAAGCAGATTGTAAACGAATGTAAAGGGCTTCCCTTGGCTCTGAAAGTGATTGGAGCTGCACTTAGAG

GGCAACCTGAGTTGTACTGGGCGAGTGCGAAGAAGAGGCTGTCGAGAGGTGAACCAATTTGCGAGTTACACGAGAACAAGTTGCTTGAGAGGATGGCAAT

CAGTGTTCAGTTTTTGCCTAAGAAGGTCAGAGAATGTTTCTTGGATTTGGGATCATTCCCCGAGGATAACAAAATTCCTCTTGATGTACTCATCAATATG

TGGGTTGAGATCCATGATGTTGATGAGGAAGAAGCCTTTGCTATCCTTGTTGAGCTTGCTGACAAGAATCTCCTCACCCTCATCAAGGATTCAAGGGCTG

GAGATCTATATAGCAGCTACCATGACATATCGGTCATTCAACACGATGTGCTGCGTGACCTTGCAATTCATATGACTAATCGGGGTGACATTAATGACAG

AAAGCAAATGATCATGCCGAGAAAGGAAGCCGAACTTCCAAGAGAATGGGAAAGAAATGCAGACAAGCCATTCAATGCTCAGATTGTTTCACTTCATACT

GGTGAAATGAATGAAATGGAGTGGTTTAGCATGGAATTCCCCAAGGCTGAAGTTCTGATCATCAACTTCTCTGCTAAAACTTACACCCTTCCTCCTTTCA

TTACAAACATGCCAAGGCTGAGGGCACTGATAGTAATCAACCATGGTCCTGAAAATGCCATACTCAGAAACCTGTCAGTACTCTCCAACTTGAGCAGCCT

GAGAAGTCTGTGGCTTGAAAGGGTTTCGCTTACCAGATTATCAGAATCCAAAACCCCTTTCCCCAACTTGAGGAAACTGTCTCTAGTCTTGTGCAAAATC

AACAACACTCTGGACGAATCCATGGCAGACCACCCAAATAATATGTTCCCTTCCCTATCAGAGCTTGCAATCGATCACTGTGAAGATCTAAACCATTTAC

CTAGCCAAATCTCTGAATTACATTGCCTTAAGAGCCTCAGCATTACAAACTGCCACAACTTGAGGCAGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATCATTCAAAATTATTATAA

AA sequence

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>Lus10021769 pacid=23154327 polypeptide=Lus10021769 locus=Lus10021769.g ID=Lus10021769.BGIv1.0 annot-version=v1.0

MKIGVGGGGGGWVGEAVKRVDMEEQRWEGNVINALGVGMAEGKTRVKEMVIERDELEIVGICGIGGSGKTTLATDVCRDDQVKFHFKNRILFLTVSQSPD

VEQLRAKIRGFITEGDDINFGRKDGLSEDGLEDGGRVLIVLDDVWSLSVLEQLIFRVHGCKTLVVSRFKFPNVLKATYEVELLKGDEAISLFFQSAFEQC

SIPPGTDASLVKQIVNECKGLPLALKVIGAALRGQPELYWASAKKRLSRGEPICELHENKLLERMAISVQFLPKKVRECFLDLGSFPEDNKIPLDVLINM

WVEIHDVDEEEAFAILVELADKNLLTLIKDSRAGDLYSSYHDISVIQHDVLRDLAIHMTNRGDINDRKQMIMPRKEAELPREWERNADKPFNAQIVSLHT

GEMNEMEWFSMEFPKAEVLIINFSAKTYTLPPFITNMPRLRALIVINHGPENAILRNLSVLSNLSSLRSLWLERVSLTRLSESKTPFPNLRKLSLVLCKI

NNTLDESMADHPNNMFPSLSELAIDHCEDLNHLPSQISELHCLKSLSITNCHNLRQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

XXXXXXXXXXXXXXXXNHSKLL

DESeq2's median of ratios [FLAX]

Coexpressed genes

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Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description	Locus	MR	r
AT4G33300		ADR1-L1	ADR1-like 1 (.1.2)	Lus10021769 [exp]	0	1
AT3G26470			Powdery mildew resistance prot...	Lus10021768 [exp]	1.0	0.9316
AT2G19130			S-locus lectin protein kinase ...	Lus10004283 [exp]	1.7	0.8232
AT2G47890	CO	COL13	B-box type zinc finger protein...	Lus10005936 [exp]	4.0	0.8303
AT5G18130			unknown protein	Lus10005702 [exp]	6.0	0.8088
AT1G15060			Uncharacterised conserved prot...	Lus10034107 [exp]	11.5	0.7328
AT5G18130			unknown protein	Lus10020284 [exp]	11.5	0.7724
AT4G19840		AtPP2A-1, ATPP2...	phloem protein 2-A1 (.1)	Lus10040602 [exp]	13.3	0.7545
AT5G05340			Peroxidase superfamily protein...	Lus10009934 [exp]	13.4	0.8054
AT3G13080		EST2, ATMRP3, A...	MULTIDRUG RESISTANCE PROTEIN 3...	Lus10013201 [exp]	15.4	0.7397
AT5G05340			Peroxidase superfamily protein...	Lus10009933 [exp]	15.5	0.7964

Lus10021769 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.

Plant FIBer expression Database

Lus10021769 [FLAX]

DESeq2's median of ratios [FLAX]

Coexpressed genes

Lus10021769 coexpression network