Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G14470 356 / 6e-104 NB-ARC domain-containing disease resistance protein (.1) AT3G14460 314 / 9e-88 LRR and NB-ARC domains-containing disease resistance protein (.1) AT3G50950 240 / 1e-65 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 (.1.2) AT3G46530 203 / 1e-53 RPP13 RECOGNITION OF PERONOSPORA PARASITICA 13, NB-ARC domain-containing disease resistance protein (.1) AT3G07040 190 / 3e-49 RPS3, RPM1 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) AT3G46730 184 / 2e-47 NB-ARC domain-containing disease resistance protein (.1) AT3G46710 174 / 2e-44 NB-ARC domain-containing disease resistance protein (.1) AT5G35450 168 / 3e-42 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G53350 165 / 4e-41 Disease resistance protein (CC-NBS-LRR class) family (.1) AT5G48620 164 / 6e-41 Disease resistance protein (CC-NBS-LRR class) family (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10005218 [exp] 932 / 0 AT3G14470 379 / 2e-113 NB-ARC domain-containing disease resistance protein (.1) Lus10042117 [exp] 496 / 3e-155 AT3G14470 354 / 2e-105 NB-ARC domain-containing disease resistance protein (.1) Lus10028279 [exp] 444 / 1e-135 AT3G14470 337 / 5e-99 NB-ARC domain-containing disease resistance protein (.1) Lus10011278 [exp] 430 / 4e-130 AT3G14470 356 / 1e-105 NB-ARC domain-containing disease resistance protein (.1) Lus10039540 [exp] 370 / 2e-108 AT3G14470 727 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Lus10005321 [exp] 373 / 8e-108 AT3G14460 607 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10024173 [exp] 363 / 6e-105 AT3G14460 681 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10026109 [exp] 363 / 2e-104 AT3G14470 598 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Lus10039509 [exp] 353 / 2e-101 AT3G14460 613 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G273900 [exp] 565 / 0 AT3G14470 364 / 1e-108 NB-ARC domain-containing disease resistance protein (.1) Potri.006G271800 [exp] 555 / 3e-177 AT3G14470 345 / 7e-102 NB-ARC domain-containing disease resistance protein (.1) Potri.006G275800 [exp] 543 / 8e-170 AT3G14470 345 / 3e-100 NB-ARC domain-containing disease resistance protein (.1) Potri.006G272066 [exp] 525 / 6e-166 AT3G14470 299 / 2e-85 NB-ARC domain-containing disease resistance protein (.1) Potri.017G121700 [exp] 477 / 3e-147 AT3G14470 461 / 2e-144 NB-ARC domain-containing disease resistance protein (.1) Potri.017G121500 [exp] 474 / 2e-146 AT3G14470 483 / 9e-153 NB-ARC domain-containing disease resistance protein (.1) Potri.017G137700 [exp] 466 / 4e-144 AT3G14470 437 / 7e-136 NB-ARC domain-containing disease resistance protein (.1) Potri.017G136266 [exp] 459 / 3e-141 AT3G14470 412 / 2e-126 NB-ARC domain-containing disease resistance protein (.1) Potri.017G127200 [exp] 460 / 5e-141 AT3G14470 404 / 4e-123 NB-ARC domain-containing disease resistance protein (.1) Potri.017G138100 [exp] 450 / 6e-138 AT3G14470 397 / 4e-121 NB-ARC domain-containing disease resistance protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00931 [flax] [poplar] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Lus10022351 pacid=23139461 polypeptide=Lus10022351 locus=Lus10022351.g ID=Lus10022351.BGIv1.0 annot-version=v1.0 ATGGCCTTGGTTGCCCTTGGCCAGAAACTCCTCCATTTGCTGGGTACCGAAGCTTTCCAAGAGTTTGCTCGAATATGGGATATCACAGACGACCTCCAGA AGCTAACCGAGACCATTTCCAACATCGAAGCTGGTCTTCGGAATGTAGAGGACGACACATCCCACTCGCCCAAAACTCATCAAGATCAGCTTTGGCTCAA GCAGATCAGGCAGGTGTATTATGATGCCGACGACATACTTGATGATTTCTGGACCGAGGTGCTGCGTCTTCAGAGGGCTACTAGTACCCCAAATCAAATC TCCATGGAGGTACGCAGTTTCTTTTCCAAGTCAAATCAACTTTTATATGGTTGGACAATTTCTAAAGGCATTCGAGACATTGGAGTTGTCCTGGATGAGA TTACAAAAAGGAAAAGAATGTTTCATTTCGAAGTGCCGCCAGTAGAGTATGTTGGTAGGGACCACTCTGACTCCAGTGTTCCTGAAATGGTTGTTGGGAG AGAGGATGATAAAAGTAGAATACTACATCTTTTATTCCAGACATCTGAGGACGAAGTGTCAGTATTCCCAGTTGTTGGAATTGGAGGGTTGGGCAAAACA GTATTAGCTCAACTCGTGTTTAATGATGAGAAGGTGAAGTCTTTCTTTGAGCGAAGAATTTGGGTGTCTGTTTCTCACAGCTTTGATGTCAGCTTAGTAA TGGAAAACATTATCGAGTCTTGCACTGGGTTGAAGCTGGAAAAGGGCTTTCAGATGGACACATTGAGGAAGCGTCTGCAAAACGAGGTGAACGGAAAGAA ATACTTGATCGTATTGGATGATGTCTGGAATGAGGATTGGGAAAAATGGCATCATTTGAGAAGTTCATTAAAAGGAGGTGCAACAGGGAGTCGTATAATG ATAACAACAAGGTCAAACAAGGTTGCAAAGCTAGTCTCTCGAATGAATCCATATGAACTCAAGGCTCTAAACGAGAGCGATTCATGGAATTTATTTAGAG ATATGGCATTTCAAAGAGGGCAAGTGGGAAATGGGACGCTGGAATTAATTGGAAGGGAGATTCTACTGAAGTGTAAAGGTGTTCCTTTGGCAATTAAAAC AATTGCTGGAGCCTTGTACTTTAAGAAGACAGAATCTGAGTGGACGGCATTTAAGAATACAGATGTATGGAAAATGAAACAGAAGGAGAGTGAAATCATG CCAACTTTGAAATTGAGTTATGATCACCTGCCCACTCATTTGAAGTATTGTTTTGCCTATTGCGGATTATTTCCAAGAGATAGCAGATTGAAAGTGAAAA CACTAATACAACTTTGGATTGCACAAGGGTATGTGAAGAATTCGACATTGGATTCGTTAGATCTCTTTGACATTGGGCTGGAATACTTCATGGAGCTTCT TTGGGGGTCTTTCTTCCAAGACGTAGTTAAGGATGAATATGGGAATATAGTATCTTGTAAGATGCATCATCTGATGCATGACTTAGCTTTAGTGGTTGCT GGAGAAGAGACTTTGACTTTGGATATTTCAAAGCAGCCAAATAAACAAAGCCATGAAGTAGATTTAAAGAGAACTCGACACGTTTCGTTGGATTTTGATT GTAGTTCTTTCAACCGTCAACTAATGAAGTCACGATGGACTTCCATGATGAATGATGCAAACAGGTTGAGAACACTTTTGTGTTCAAAACAAGAATGGCT GGAAGATAAAAAAGTCTTTGATGAAATCACCTTCAATAGGACAAGCTTGAGGGCATTGGATCTTAGTCATTTTGGATTGGTGAGGGTGTCCAGTACCATT CAGAAACTGAAGCATATCAGATTCCTCAACCTGAGTAATAATCCTATGGAGTTATTACCGGATGAGATCACAGAATTGGTAAATTTGGAAGTGCTGCAAT TAGACAACTGCATATTCATGAAACATCTCCCCAAAAGCACTGGAAAGCTATCGAGCCTTACCCATCTGGGTCTCGATGGGTGTAAAGATTTGAAGTGTCT GCCACTAGGAATTGGCAAATTAACCTGTCTACTAGAATTGCCGGTATTCTTAGTTCCAGAAGGTGGTGGCACTGGTGCTGCTGGGATAGGTGAGATACAA AACTTGAACAAGTTGAGGGGAAGCTTGAAGATTGAGAATCTTCAATGGGTGAAGAATCCATCTGAAGCCTCCAAAGCTTCTCTGTGTGACAAATTACATC TAGAGCAATTAAAGTTGTCGTGGGCAATGGATAAGGCCAATAGTGATGTTGATATAGAGGATCAAGTATTGGACGCCCTACGTCCGCACCCAGATTTGAA GGTGTTGTGGTTGCACAACCACGGGGGATTGAAGTTCCCAAGTTGGTTTCCCCACTTGACAGTTGGAGCTATTGAGATTGGACTCTCTAGAATGGATAGA TACAGACTCGCTAGCATCCTTTTTCCCTTCTCTCAAGTCGTATCTCTAGAATGGATAGATATAGACTCGCTAGCATCCTTTTTCCCTTCTCTCAAGTCGT TGAAGATTGAACGTTGTGATAAGTTAAAGGGATGGCGGGCACCTGCAGGAAAACCGGTTCCAACATTTCCTTGTGTCTCTGCTGTGCATATCGATGGATG CAGTAACATCGTTTCCTTGCCCCTTTTCTCACCGTTGCATCTCGATACTGTTTCGCTACTTAAAGTCAGGAAGAAGTTTTTGAATCTAATTCTGAGCCCT CCCCCCTCTGTCTCTCTTCCTAGTTCTTCTTCTCCGCCATATTTTCATCTAGAGGATCTTAGAATCTGCTCCATGTACGATCTTGATACTCTTCCAGAAG AGATTCTTGCTTGTCTATCTTCGGTCAAGATGTTGTCGATCATGGATTGTGCGAACTTAGTGACTCTGGATCGAGCCCTGCCTTACTTAACTTCCCTCGA GATGATTAAGATTGCAGACTGTGATAAGTTGGATCTGCTATACACTTATGACACCAGTGCTGATCAATTGAGCCTTCAAAACCTCCATGCCGTGGAGTTT CACAATATTGCGAAATTGACTTGTCTGCCGGAGTGGCTTCAAGTTGCGCCAAACCTGGAAAAAATTATGACTGCACTCTGCCCCATCGGTAGCATCCCAA TCTGGATGCACACACTCAAGGAATTAAAAGGATTAATCATCCTTCAGTATGGGAAATCTGCCGAGCAATTTGTACAGGAAGATCTGGAAAAGATTGCTCA CGTTCCTTATGTTATCATCAATGCATTTTGTATAAGGATGGAAGGCCAGTTTAAAATCAATTGGGCACAGACTAACGACATAGTTGTTGATGGTGAAGCA GAACAAGTAGAAGAGAGATCCAGGCTCGTACAGTTCTTGAACAATGTTTGCAACAATCTGACAGCCTTCTCCTTGGGATGCTTTGGAAGCGGAAGTAGCA ATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAA TGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAAT GGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATG GTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGG TAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGT AATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTAATGATATGCCAGGAAGCAGCAGTAGCAATGGTA ATGATATGCCAGGAAGCAGTAGTAGCAATGATAATGATATGCAACACACAGCAGACCAGATCGTATGA
AA sequence Show only first row Show all	>Lus10022351 pacid=23139461 polypeptide=Lus10022351 locus=Lus10022351.g ID=Lus10022351.BGIv1.0 annot-version=v1.0 MALVALGQKLLHLLGTEAFQEFARIWDITDDLQKLTETISNIEAGLRNVEDDTSHSPKTHQDQLWLKQIRQVYYDADDILDDFWTEVLRLQRATSTPNQI SMEVRSFFSKSNQLLYGWTISKGIRDIGVVLDEITKRKRMFHFEVPPVEYVGRDHSDSSVPEMVVGREDDKSRILHLLFQTSEDEVSVFPVVGIGGLGKT VLAQLVFNDEKVKSFFERRIWVSVSHSFDVSLVMENIIESCTGLKLEKGFQMDTLRKRLQNEVNGKKYLIVLDDVWNEDWEKWHHLRSSLKGGATGSRIM ITTRSNKVAKLVSRMNPYELKALNESDSWNLFRDMAFQRGQVGNGTLELIGREILLKCKGVPLAIKTIAGALYFKKTESEWTAFKNTDVWKMKQKESEIM PTLKLSYDHLPTHLKYCFAYCGLFPRDSRLKVKTLIQLWIAQGYVKNSTLDSLDLFDIGLEYFMELLWGSFFQDVVKDEYGNIVSCKMHHLMHDLALVVA GEETLTLDISKQPNKQSHEVDLKRTRHVSLDFDCSSFNRQLMKSRWTSMMNDANRLRTLLCSKQEWLEDKKVFDEITFNRTSLRALDLSHFGLVRVSSTI QKLKHIRFLNLSNNPMELLPDEITELVNLEVLQLDNCIFMKHLPKSTGKLSSLTHLGLDGCKDLKCLPLGIGKLTCLLELPVFLVPEGGGTGAAGIGEIQ NLNKLRGSLKIENLQWVKNPSEASKASLCDKLHLEQLKLSWAMDKANSDVDIEDQVLDALRPHPDLKVLWLHNHGGLKFPSWFPHLTVGAIEIGLSRMDR YRLASILFPFSQVVSLEWIDIDSLASFFPSLKSLKIERCDKLKGWRAPAGKPVPTFPCVSAVHIDGCSNIVSLPLFSPLHLDTVSLLKVRKKFLNLILSP PPSVSLPSSSSPPYFHLEDLRICSMYDLDTLPEEILACLSSVKMLSIMDCANLVTLDRALPYLTSLEMIKIADCDKLDLLYTYDTSADQLSLQNLHAVEF HNIAKLTCLPEWLQVAPNLEKIMTALCPIGSIPIWMHTLKELKGLIILQYGKSAEQFVQEDLEKIAHVPYVIINAFCIRMEGQFKINWAQTNDIVVDGEA EQVEERSRLVQFLNNVCNNLTAFSLGCFGSGSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSN GNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNG NDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNGNDMPGSSSSNDNDMQHTADQIV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G14470			NB-ARC domain-containing disea...		Lus10022351 [exp]	0	1
AT3G24495		ATMSH7, MSH7, M...	MUTS HOMOLOG 6-2, ARABIDOPSIS ...		Lus10033095 [exp]	1.4	0.9010
AT4G10940			RING/U-box protein (.1)		Lus10001535 [exp]	1.4	0.9140
AT3G06790			plastid developmental protein ...		Lus10037488 [exp]	1.7	0.8947
AT3G11710		ATKRS-1	lysyl-tRNA synthetase 1 (.1)		Lus10001625 [exp]	2.0	0.8940
AT3G17740			unknown protein		Lus10031899 [exp]	2.6	0.8714
AT3G24060			Plant self-incompatibility pro...		Lus10011754 [exp]	2.8	0.8371
AT3G19700		IKU2	HAIKU2, Leucine-rich repeat pr...		Lus10012461 [exp]	3.2	0.8347
AT1G60990			Glycine cleavage T-protein fam...		Lus10020818 [exp]	3.2	0.8825
AT4G32050			neurochondrin family protein (...		Lus10001536 [exp]	4.9	0.8813
AT5G08300			Succinyl-CoA ligase, alpha sub...		Lus10010185 [exp]	5.7	0.8231

Compare expression of checked genes

Lus10022351 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.