Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G18220 149 / 6e-45 Drug/metabolite transporter superfamily protein (.1) AT4G18210 150 / 1e-44 ATPUP10 purine permease 10 (.1) AT4G18197 131 / 1e-37 PEX17, ATPUP7, AT4G18200 PEROXIN 17, ARABIDOPSIS THALIANA PURINE PERMEASE 7, purine permease 7 (.1) AT1G44750 129 / 3e-37 ATPUP11 purine permease 11 (.1.2.3) AT4G18195 124 / 8e-35 ATPUP8, AT4G18200 ARABIDOPSIS THALIANA PURINE PERMEASE 8, purine permease 8 (.1) AT4G18205 123 / 2e-34 AT4G18200 Nucleotide-sugar transporter family protein (.1) AT5G41160 114 / 2e-31 ATPUP12 ARABIDOPSIS THALIANA PURINE PERMEASE 12, purine permease 12 (.1) AT4G18190 107 / 2e-28 ATPUP6 purine permease 6 (.1) AT4G08700 106 / 3e-28 ATPUP13 Drug/metabolite transporter superfamily protein (.1) AT1G19770 92 / 8e-23 ATPUP14 purine permease 14 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10038492 [exp] 232 / 2e-76 AT4G18210 344 / 3e-116 purine permease 10 (.1) Lus10026130 [exp] 176 / 9e-55 AT4G18210 382 / 2e-131 purine permease 10 (.1) Lus10008689 [exp] 176 / 2e-54 AT4G18210 382 / 3e-131 purine permease 10 (.1) Lus10042836 [exp] 122 / 8e-37 AT4G18220 155 / 2e-47 Drug/metabolite transporter superfamily protein (.1) Lus10040118 [exp] 129 / 2e-36 AT4G18210 336 / 2e-113 purine permease 10 (.1) Lus10030927 [exp] 127 / 7e-36 AT4G18210 336 / 1e-113 purine permease 10 (.1) Lus10028132 [exp] 127 / 1e-35 AT4G18220 361 / 4e-123 Drug/metabolite transporter superfamily protein (.1) Lus10019503 [exp] 123 / 3e-34 AT1G44750 452 / 1e-159 purine permease 11 (.1.2.3) Lus10043350 [exp] 122 / 4e-34 AT1G44750 456 / 8e-161 purine permease 11 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G352100 [exp] 152 / 2e-45 AT4G18210 398 / 1e-137 purine permease 10 (.1) Potri.001G352200 [exp] 142 / 1e-41 AT4G18220 315 / 1e-105 Drug/metabolite transporter superfamily protein (.1) Potri.001G147600 [exp] 141 / 3e-41 AT4G18210 315 / 7e-105 purine permease 10 (.1) Potri.014G043900 [exp] 132 / 7e-38 AT1G44750 434 / 2e-152 purine permease 11 (.1.2.3) Potri.005G160300 [exp] 83 / 1e-19 AT1G28220 413 / 8e-145 purine permease 3 (.1) Potri.006G184900 [exp] 63 / 2e-12 AT2G24220 404 / 6e-141 purine permease 5 (.1.2) Potri.001G074100 [exp] 54 / 3e-09 AT1G30840 303 / 5e-101 purine permease 4 (.1.2) Potri.002G099600 [exp] 53 / 5e-09 AT1G28220 229 / 2e-72 purine permease 3 (.1) Potri.003G156900 [exp] 53 / 1e-08 AT1G30840 323 / 4e-108 purine permease 4 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0184 [flax] [poplar] DMT PF03151 [flax] [poplar] TPT Triose-phosphate Transporter family
Representative CDS sequence Show only first row Show all	>Lus10023317 pacid=23181030 polypeptide=Lus10023317 locus=Lus10023317.g ID=Lus10023317.BGIv1.0 annot-version=v1.0 ATGGACATGAACATCTGCCTCAACTTCGCCGCCACGTCGGTCACCCTCGTGGGCCTTTTTGCGAGCGGGGAGTGGAAAAGATTGGGTGCTGAGATGACTG ATTACAGCCTTGGAATGGCGTCGTATGTGATGACTTTGGTCGGGATCGCTGTATTCTGCCAGCTGTTTTATATCGGGGTTGTCGGGCTGATCTTTGAGGT GTCGTCGCTGTTTTCAAATTCGATCAGTGTGGTTGGCGCTCCGATTGTCCCGATCATGGCGGTGGTGTTTTTCCATGATAAGATGAGTGGGGTTAAGGGG GTTTCGATGGCGTTGGCAATTTGGGGGTTTGTTTCTTATATATATCCTTATTATGTTGATAATCGTGTGTCTAGGAAGGCGGCGGCTGCTGCTGCCGGCG GTAGTAGTTCGACGTCCGGGTGA
AA sequence Show only first row Show all	>Lus10023317 pacid=23181030 polypeptide=Lus10023317 locus=Lus10023317.g ID=Lus10023317.BGIv1.0 annot-version=v1.0 MDMNICLNFAATSVTLVGLFASGEWKRLGAEMTDYSLGMASYVMTLVGIAVFCQLFYIGVVGLIFEVSSLFSNSISVVGAPIVPIMAVVFFHDKMSGVKG VSMALAIWGFVSYIYPYYVDNRVSRKAAAAAAGGSSSTSG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G18210		ATPUP10	purine permease 10 (.1)		Lus10023317 [exp]	0	1
AT4G18210		ATPUP10	purine permease 10 (.1)		Lus10023318 [exp]	1.0	0.9698
AT2G25770			Polyketide cyclase/dehydrase a...		Lus10040227 [exp]	5.0	0.8192
AT1G04220		KCS2	3-ketoacyl-CoA synthase 2 (.1)		Lus10021895 [exp]	5.2	0.8494
AT5G65380			MATE efflux family protein (.1...		Lus10024945 [exp]	8.5	0.8540
AT1G17840		AtABCG11, WBC11...	DESPERADO, CUTICULAR DEFECT AN...		Lus10040644 [exp]	11.7	0.8241
AT1G66950		ABCG39, PDR11, ...	ATP-binding cassette G39, plei...		Lus10027725 [exp]	13.8	0.7803
AT3G24503		ALDH1A, REF1, A...	REDUCED EPIDERMAL FLUORESCENCE...		Lus10023626 [exp]	19.3	0.8054
AT3G45740			hydrolase family protein / HAD...		Lus10023480 [exp]	20.4	0.7934
AT4G04750			Major facilitator superfamily ...		Lus10033795 [exp]	20.8	0.8033
AT1G01120		KCS1	3-ketoacyl-CoA synthase 1 (.1)		Lus10010108 [exp]	21.5	0.7464

Compare expression of checked genes

Lus10023317 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.