Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G14470 597 / 0 NB-ARC domain-containing disease resistance protein (.1) AT3G14460 481 / 3e-146 LRR and NB-ARC domains-containing disease resistance protein (.1) AT1G53350 198 / 8e-52 Disease resistance protein (CC-NBS-LRR class) family (.1) AT3G50950 192 / 5e-50 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 (.1.2) AT1G58602 191 / 3e-49 LRR and NB-ARC domains-containing disease resistance protein (.1.2) AT1G50180 189 / 3e-49 NB-ARC domain-containing disease resistance protein (.1) AT5G35450 187 / 2e-48 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G59780 186 / 8e-48 NB-ARC domain-containing disease resistance protein (.1) AT1G58848 184 / 6e-47 Disease resistance protein (CC-NBS-LRR class) family (.1), Disease resistance protein (CC-NBS-LRR class) family (.2) AT1G59218 184 / 6e-47 Disease resistance protein (CC-NBS-LRR class) family (.1), Disease resistance protein (CC-NBS-LRR class) family (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026132 [exp] 2265 / 0 AT3G14460 594 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10005321 [exp] 1091 / 0 AT3G14460 607 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10024173 [exp] 644 / 0 AT3G14460 681 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10039509 [exp] 633 / 0 AT3G14460 613 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10039540 [exp] 610 / 0 AT3G14470 727 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Lus10007261 [exp] 601 / 0 AT3G14460 654 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10005218 [exp] 403 / 8e-120 AT3G14470 379 / 2e-113 NB-ARC domain-containing disease resistance protein (.1) Lus10003571 [exp] 374 / 2e-111 AT3G14470 363 / 6e-110 NB-ARC domain-containing disease resistance protein (.1) Lus10004126 [exp] 362 / 1e-106 AT3G14470 353 / 6e-106 NB-ARC domain-containing disease resistance protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G261600 [exp] 1042 / 0 AT3G14470 628 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.004G194800 [exp] 968 / 0 AT3G14470 622 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.001G261300 [exp] 882 / 0 AT3G14470 538 / 2e-170 NB-ARC domain-containing disease resistance protein (.1) Potri.004G196100 [exp] 780 / 0 AT3G14470 647 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.001G029300 [exp] 708 / 0 AT3G14470 676 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.007G137101 [exp] 675 / 0 AT3G14470 616 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.003G055600 [exp] 652 / 0 AT3G14470 615 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.017G015600 [exp] 648 / 0 AT3G14470 591 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.T126806 [exp] 634 / 0 AT3G14470 587 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.001G025400 [exp] 610 / 0 AT3G14470 558 / 0.0 NB-ARC domain-containing disease resistance protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00931 [flax] [poplar] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Lus10026109 pacid=23173104 polypeptide=Lus10026109 locus=Lus10026109.g ID=Lus10026109.BGIv1.0 annot-version=v1.0 ATGGAAGTTGTGGCTACTGTCGGTGGTGCTTTGCTTTCTGAATCTTTGCAGCAGCTGATTCGAAAGCTGGGAACCCATGAATTCCTCGTGTATTTTCGTC AAGCAGAAGAAGTCCTGGCTGAATTCAAGATGTGGGAGAGTCTGCTGAGGAAGATATATGCTGCGCTTGATGATGCTGAGGAGAAACAAATGACTAGCAG GTTGGTGAGTATATGGGTAAGTGAGCTTCGAGACTTGGCTTATGATGCGGAAGATGTGCTTGATTCGTTTTCTACAGAGCAACTGAGGAGGAAGCTTAAG GAAGAAACTGTTTCTTCAAGTACAAGTAAGATTCAAGGCCTGATCCCTGGTTGTTTCTCTGGCATCAGTCTGCAAACGCTTAAGTTCAATGCTGAAATGA TGTCAAAGATTCAGGACGTCACTGCCAGATTGCGGAAGATCACTGCGGATAAAGATGATCTGGATCTAAAGAATATTTCTGGGAGGTCAATGATGGGCCA TCAACCCACTGAAAGATTGCCAACTACTTCTCTGGTCAATGAAAACAGGGTTTATGGGAGGGAGAAAGATGAGCAGGCCATTTTACAAGTTCTAAAAGCT GAGGCAGCGGATGTTGATATATCCCTGATCCCAATAATTGGTATGGGAGGCCTAGGTAAGACTACCCTTGCACAACTTGTTCTTAGTCGTGCCAAAACAG TGTTTGATTTTACAGCTTGGGTTTCAGTTGGTGAAGACTTTGATGTCTACAGGATCACCAAGACCATTTTAGGCTTGGGTGGTTCTGAGGGTATGGATTT AAATTCACTCCAAGAGAAGTTGAAGGAGAAGTTAGCTAGAAAGAAATTTCTTATTGTTCTTGACGATGTTTGGAACGAGAGCTATGAAAAATGGGTACTT TGTCGAGCTCCGCTTGAAAATGGATCTTCAGGAAGCAAAATAGTTGTTACTACTCGTAATGCAAGTGTTGCATCAATCATGGGTACTGATCCCCCGTATA TTCTCAAGGAGTTGGCTTTCAATGGTTGCCTTTCTCTATTTGCAGAGCATGCTTTGGGAGCAAGAACGTTTGCAGCCCACTCCAATCTGGAAGAGATTGG TAACAAAATTGTACAAAAATGTAAAGGTTTACCTTTAGCTGTTAAGGTTATGGGGGGTCTATTACGAGGTAAACAGAATCCCAGACAATGGGAAGAAGTG TTGAACAGCGAGATATGGGAGTTTCCTGAGAGCAATGGTGTTCTTCCTGCCTTGAGGGTGAGCTACTATCACCTTCCTTCACATTTGAAGCAATGCTTTG CTTATTGTGGAATATTGCCAAAGGACATCGAATTTGAAGAGGATGAGTTGGTCTTGCTGTGGATGGCAGAGGGCTTTCTAGCGCAGGCAAAGGAAAAGAA GTATGCAAAGGACTTGGGCCATAGATATTTTCGTGATTTGGTTTCAAGATCATTCTTCCAACAAGCAAATGAGGACAAATCTGAATTAAGATCATTCTTC CTGCAATCAAATGAGCGCAAATCTAAATTCACCATGCACGACTTAATAAATGATCTGGCTGAGTTTGAGAGTAAAAGGATCTGTTTCAAGCTGGATGGCA AGTTGGAAGAGACAAATTCATGTTTGAAAGTTCGCTACTCATCTTTCAACCGCCATAGATATGATTTGTTGACAAGATTTGAAGTCTTGAACAATATGAA GAACCTGAGATCGTTCTTGCCCTTTCCGTTCCCAACATATCAAGGGTACTTTCTGTCCGACAAAGTGCTGTTTGAGTTGATACCAACACTCAGATATCTG AGGGTACTCTCGTTAGCTGGTTATATATTGGAGAAGTTACCAGAAACAATTTTTGCTCTACAACATTTACGTTATCTCAACATTTCCTACATTGATATTG TTGCCTTGTCTGAACGGGTTGGTGAGCTTCTCAACTTGCAAACTCTGAGGTTACGAGGGTGTCAAAGACTTGTTAAATTGCCAAGAAGTATAGGCAATTT GATCAACCTACAGTGGCTTGACATCCAGGAAACAGACAGCTTGCAAGAGCTTCCAGCAGAGATAGCCAAGTTGAGAAATCTCATTACTTTACCCAAGTTT GTAGTAGGGAAGAGGAAGGGGCTCGGAATACAAGACTTGGGAAAGTTGACTCTACTTCAAGGAAAGCTTCACATAAAAGGATTGTGTAATGTTCTGAACA CCCAAGATGCGAAGCTCGCTGATTTGAGACAAAAGCAAGGTGTTGAGGATTTGACCTTGGAATGGTCTTCCGACTTCAAATATTCTCGTAATGCGACAAA CGAATTCAAGGTGTTAAACTTACTGATGCCTCATCTGAAATTGAAAAGGCTTCGTGTTGAGTTTTATGCTGGCATACAGTTCGCAACATGGGTTGGAGAT CCCAAGTTTGCTGATATGGTGCATTTAGAGCTCCTGAATTGTAAGAGAATCCAGTCACTTCCGCCACTTGGACAGCTACCTTTTCTTATGACGCTGACAA TCAGTGGCCTGGATGGAGTGAAAGAAGTTGGAGCAGAATTTTATGGGGAAAGTAATTCAACCGGTCCCTTTCCAGCATTGGAGACTCTAAGAATACAGTA TATGCCGGAGTTGGTAGAGTGGTCTTGTTTTGCAGGTGTTACTGAAAGGTCTACCGTGTGTTTCCCCAATTTGCTTTATCTTACAGTCAGGGATTGCCCC AAGTTGATTGGACAATTGCCAAACTCCCTACCTTGCCTCCAAAGACTGGAAATTTGGCGGTGCCCACAGTTGGCTAATCTACCCGAAACGCTTTCATCTC TGTCGGAATTAGATATCAATGACTGTGACAAGGTGATTCCCATAAACGTATGCAGTCTAAAATCCCTTGCAACGTTAAGCCTCGAGAAACTTGCAAGCCC TGCCAGTATGCAGGACGTGTTCATAGAAGGCTTGAGGGGGCTTGCTTGTTTGAAGGATTTAAATATTAAAGAATGTGATCAGCTTTTGTGCCTAGGAGAA GGAGCGGAAGGGCTTCTACCCTCTAGTCTTGAATCCCTGTGGATAAGCTGTTGCCCGAAACTTGAGAAGCTGTCAAACGGACTCCACAAGCTCACACATC TCAGCAGTTTGTTCGTTCAGAATTGCCCAAATCTTGTGTCCTTTGGAGAACAAGGCTTGCTATCCAGCATTGGTGATGTGTGTATAGGAAACTGTGCTTC TTTGAAGTCTTTGGTTATAAGAGATACAGACACAATCGAGGATAGCAATCATCTTGAAAGTTTGACTCTTCGTGGATGTTCCTCTCTCGCGTCCTCTCTC GCGATTTTCCACGTTGGCATGTCTATTGAATCATTGAAGAACCTAACTATCTCCAACCTTACAACACAGTGCTTAGATGAACTATGCCATCTTGCTCTTC CTCACCTCACAGATCTGTCAATTGAAAACAGTCCAGAGTTAGAGAGATTCCCGGACGTTGCATTCCCTACCACCCTCCATATTGTCAAACGGCTCAGGAT TTGGTTCTGCAGTAATTTGAGATCTCTTCCCAACCAGTTGCCAGAACTCACCTCTCTTCTTCTTTTGGAGGTAACTGGCTGCGGGAGTCTAGAGTCTTTC CCACAAGGTGGATTTCCTTTGAACCTCATCATGCTTACGATCGTGCATTGCAAGAGTCTCAGGCAACCAATATCTGAATGGGGTGTTAACAGACTTGCTT CACTGAAACGACTTTCCATCAGAGGCGAATGTCCTAGTACTGGGGTGCCCTGCTTCCCAGATGATGAGGGGATTTGGCTTCCAACTTCACTCACCTTTCT CCTCATTTCAGACTTCAGTGAGCTTAAATCTGTATCCAGAGGCCTTAGATGTCTCACCTCTTTGGAGGAGTTGTTGATAATGTATTGCCCGAAGGTTCAG TCTTTACCGAAGGAGGGACTTCCCCCATCACTTGGAAGCTTAAAGCTGCACGAATGTCCTGGTTTGAAGAAAGTCAAGAAACAGTGTCTGAAACGGAAAG GAGAGTATTGGCGAGCGATGCAACAGATTCCTTTTGTGGCAATTGATTCCAATGAATCTTGTTCGTATTCGTGGCAGGATCCCTAA
AA sequence Show only first row Show all	>Lus10026109 pacid=23173104 polypeptide=Lus10026109 locus=Lus10026109.g ID=Lus10026109.BGIv1.0 annot-version=v1.0 MEVVATVGGALLSESLQQLIRKLGTHEFLVYFRQAEEVLAEFKMWESLLRKIYAALDDAEEKQMTSRLVSIWVSELRDLAYDAEDVLDSFSTEQLRRKLK EETVSSSTSKIQGLIPGCFSGISLQTLKFNAEMMSKIQDVTARLRKITADKDDLDLKNISGRSMMGHQPTERLPTTSLVNENRVYGREKDEQAILQVLKA EAADVDISLIPIIGMGGLGKTTLAQLVLSRAKTVFDFTAWVSVGEDFDVYRITKTILGLGGSEGMDLNSLQEKLKEKLARKKFLIVLDDVWNESYEKWVL CRAPLENGSSGSKIVVTTRNASVASIMGTDPPYILKELAFNGCLSLFAEHALGARTFAAHSNLEEIGNKIVQKCKGLPLAVKVMGGLLRGKQNPRQWEEV LNSEIWEFPESNGVLPALRVSYYHLPSHLKQCFAYCGILPKDIEFEEDELVLLWMAEGFLAQAKEKKYAKDLGHRYFRDLVSRSFFQQANEDKSELRSFF LQSNERKSKFTMHDLINDLAEFESKRICFKLDGKLEETNSCLKVRYSSFNRHRYDLLTRFEVLNNMKNLRSFLPFPFPTYQGYFLSDKVLFELIPTLRYL RVLSLAGYILEKLPETIFALQHLRYLNISYIDIVALSERVGELLNLQTLRLRGCQRLVKLPRSIGNLINLQWLDIQETDSLQELPAEIAKLRNLITLPKF VVGKRKGLGIQDLGKLTLLQGKLHIKGLCNVLNTQDAKLADLRQKQGVEDLTLEWSSDFKYSRNATNEFKVLNLLMPHLKLKRLRVEFYAGIQFATWVGD PKFADMVHLELLNCKRIQSLPPLGQLPFLMTLTISGLDGVKEVGAEFYGESNSTGPFPALETLRIQYMPELVEWSCFAGVTERSTVCFPNLLYLTVRDCP KLIGQLPNSLPCLQRLEIWRCPQLANLPETLSSLSELDINDCDKVIPINVCSLKSLATLSLEKLASPASMQDVFIEGLRGLACLKDLNIKECDQLLCLGE GAEGLLPSSLESLWISCCPKLEKLSNGLHKLTHLSSLFVQNCPNLVSFGEQGLLSSIGDVCIGNCASLKSLVIRDTDTIEDSNHLESLTLRGCSSLASSL AIFHVGMSIESLKNLTISNLTTQCLDELCHLALPHLTDLSIENSPELERFPDVAFPTTLHIVKRLRIWFCSNLRSLPNQLPELTSLLLLEVTGCGSLESF PQGGFPLNLIMLTIVHCKSLRQPISEWGVNRLASLKRLSIRGECPSTGVPCFPDDEGIWLPTSLTFLLISDFSELKSVSRGLRCLTSLEELLIMYCPKVQ SLPKEGLPPSLGSLKLHECPGLKKVKKQCLKRKGEYWRAMQQIPFVAIDSNESCSYSWQDP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G14470			NB-ARC domain-containing disea...		Lus10026109 [exp]	0	1
AT3G17700		ATCNGC20, CNBT1	CYCLIC NUCLEOTIDE-GATED CHANNE...		Lus10031320 [exp]	2.0	0.8380
AT5G46410		SSP4	SCP1-like small phosphatase 4 ...		Lus10025376 [exp]	9.5	0.7827
AT3G17700		ATCNGC20, CNBT1	CYCLIC NUCLEOTIDE-GATED CHANNE...		Lus10031891 [exp]	9.8	0.8467
AT2G23450			Protein kinase superfamily pro...		Lus10019657 [exp]	11.0	0.8261
AT2G23450			Protein kinase superfamily pro...		Lus10000741 [exp]	16.1	0.7971
AT1G71830		ATSERK1, SERK1	somatic embryogenesis receptor...		Lus10028715 [exp]	25.8	0.8111
AT5G53130		ATCNGC1, CNGC1	CYCLIC NUCLEOTIDE-GATED CHANNE...		Lus10019014 [exp]	32.7	0.7313
AT2G17760			Eukaryotic aspartyl protease f...		Lus10028411 [exp]	32.9	0.7969
AT1G34300			lectin protein kinase family p...		Lus10028711 [exp]	37.3	0.7862
AT5G57580			Calmodulin-binding protein (.1...		Lus10011248 [exp]	41.4	0.7497

Compare expression of checked genes

Lus10026109 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.