Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G18210 337 / 2e-113 ATPUP10 purine permease 10 (.1) AT4G18220 328 / 6e-111 Drug/metabolite transporter superfamily protein (.1) AT4G18197 289 / 6e-95 PEX17, ATPUP7, AT4G18200 PEROXIN 17, ARABIDOPSIS THALIANA PURINE PERMEASE 7, purine permease 7 (.1) AT4G18195 282 / 5e-92 ATPUP8, AT4G18200 ARABIDOPSIS THALIANA PURINE PERMEASE 8, purine permease 8 (.1) AT4G18205 281 / 7e-92 AT4G18200 Nucleotide-sugar transporter family protein (.1) AT4G18190 256 / 5e-82 ATPUP6 purine permease 6 (.1) AT1G44750 246 / 2e-78 ATPUP11 purine permease 11 (.1.2.3) AT4G08700 229 / 6e-72 ATPUP13 Drug/metabolite transporter superfamily protein (.1) AT5G41160 227 / 3e-71 ATPUP12 ARABIDOPSIS THALIANA PURINE PERMEASE 12, purine permease 12 (.1) AT1G28220 179 / 6e-53 ATPUP3 purine permease 3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008689 [exp] 672 / 0 AT4G18210 382 / 3e-131 purine permease 10 (.1) Lus10038492 [exp] 387 / 4e-133 AT4G18210 344 / 3e-116 purine permease 10 (.1) Lus10028132 [exp] 281 / 4e-91 AT4G18220 361 / 4e-123 Drug/metabolite transporter superfamily protein (.1) Lus10043350 [exp] 273 / 1e-88 AT1G44750 456 / 8e-161 purine permease 11 (.1.2.3) Lus10019503 [exp] 271 / 9e-88 AT1G44750 452 / 1e-159 purine permease 11 (.1.2.3) Lus10030927 [exp] 244 / 2e-77 AT4G18210 336 / 1e-113 purine permease 10 (.1) Lus10040118 [exp] 237 / 1e-74 AT4G18210 336 / 2e-113 purine permease 10 (.1) Lus10023318 [exp] 179 / 2e-54 AT4G18210 159 / 9e-47 purine permease 10 (.1) Lus10023317 [exp] 176 / 3e-54 AT4G18210 150 / 3e-45 purine permease 10 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G352100 [exp] 377 / 1e-129 AT4G18210 398 / 1e-137 purine permease 10 (.1) Potri.001G352200 [exp] 343 / 2e-116 AT4G18220 315 / 1e-105 Drug/metabolite transporter superfamily protein (.1) Potri.001G147600 [exp] 305 / 6e-101 AT4G18210 315 / 7e-105 purine permease 10 (.1) Potri.014G043900 [exp] 287 / 3e-94 AT1G44750 434 / 2e-152 purine permease 11 (.1.2.3) Potri.005G160300 [exp] 157 / 2e-44 AT1G28220 413 / 8e-145 purine permease 3 (.1) Potri.002G099600 [exp] 141 / 2e-38 AT1G28220 229 / 2e-72 purine permease 3 (.1) Potri.006G184900 [exp] 132 / 7e-35 AT2G24220 404 / 6e-141 purine permease 5 (.1.2) Potri.003G156900 [exp] 89 / 3e-19 AT1G30840 323 / 4e-108 purine permease 4 (.1.2) Potri.001G074100 [exp] 80 / 2e-16 AT1G30840 303 / 5e-101 purine permease 4 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0184 [flax] [poplar] DMT PF03151 [flax] [poplar] TPT Triose-phosphate Transporter family
Representative CDS sequence Show only first row Show all	>Lus10026130 pacid=23173287 polypeptide=Lus10026130 locus=Lus10026130.g ID=Lus10026130.BGIv1.0 annot-version=v1.0 ATGGAACACCAACCTCAACAAACCCAGCTTCACGTTCTGGAAAATGAGGAATGGGTTAAGCATGAAGTCGGTCTGATAAGCGGCAGCAAGAAGAAGGAGA ATTACATGTGGTGGGTGAAAGTCACACTCTACACATTGTTCGTACTGCTCGGCCAAGCCGTGGCTCTCCTCCTGGGACGCCTCTACTTCCTCAAAGGAGG CAACAGCAAGTGGATGTCGTCGTTCGTCCAAGTCGCTGGCTTTCCGATCCTCATCCCTTACTACCTCTTCACCACACTCAAGCAAAACAACAGCAAGCAC TCCGAGGAAGACGAAGATGTCGAATTCGACACGAAACCGACGTCGAGAACCACTCTGGTCTCCATCTACACGGCCCTCGGCCTAATCATAGGACTCATTT GCTTTCTGTACTCTGTCGGCCTGCAGTACCTCCCTGTTTCGACCTACACGCTTCTCTGTGCTTCACAACTCGCCTTCAACTCATTTTTCTCCTACTTCAT CAACTCCCAAAAGTTCACCCCATTCGTCGTAAATGCCTTAGTTCTCCTTACCATCTCCTCTGTCCTCTTAGTCTTCAACAACGACGACCCTTCTCCTTCC TCTTCCTCTTCTTCTACCAAAGCCTCTAACTTCATCATCGGGTTCATATGCACGATCTCTGGCTCAGCACTCTACGGCCTGGTGCTTTCGACCGCACAGT TCGTGTTCACCAGAGTGATCAAGCGACAGACGTTCAAGAACATGATGGACATGATCATCTACGAGAACATGGTGGCCACCCTCGTTACTCTGGTGGGTCT TTTCGCCAGTGGGGAGTGGAAGGTGCTGACCAAGGAGATGGACTCGTTCCGGTTGGGTGCAGTGTCGTACTTGATGACTTTAGTTTGGATTGCAGTCTTC TGGCAGCTCTTCTCGATCGGAGTTGTGGGGCTGATCTTTGAGGTTTCTTCTTTGTTCTCGAACTCGATCACTGTCGTCGGATTGCCTATCGTCCCGATGA TGGCCGTGTTTTGTTTCCACGATAAGATGAACGGGATCAAAGGTGTCTCAATGGCTTTGGCTCTTTGGGGATTCGTTTCGTTTGTTTATCAGTATTACGT CGATGCTCAACAGCAGAAGAGAGTTGATAACAATGGTGCTGATCAGGCTGCCTCTTCAGCTCTAACTTCTTCTTCATGA
AA sequence Show only first row Show all	>Lus10026130 pacid=23173287 polypeptide=Lus10026130 locus=Lus10026130.g ID=Lus10026130.BGIv1.0 annot-version=v1.0 MEHQPQQTQLHVLENEEWVKHEVGLISGSKKKENYMWWVKVTLYTLFVLLGQAVALLLGRLYFLKGGNSKWMSSFVQVAGFPILIPYYLFTTLKQNNSKH SEEDEDVEFDTKPTSRTTLVSIYTALGLIIGLICFLYSVGLQYLPVSTYTLLCASQLAFNSFFSYFINSQKFTPFVVNALVLLTISSVLLVFNNDDPSPS SSSSSTKASNFIIGFICTISGSALYGLVLSTAQFVFTRVIKRQTFKNMMDMIIYENMVATLVTLVGLFASGEWKVLTKEMDSFRLGAVSYLMTLVWIAVF WQLFSIGVVGLIFEVSSLFSNSITVVGLPIVPMMAVFCFHDKMNGIKGVSMALALWGFVSFVYQYYVDAQQQKRVDNNGADQAASSALTSSS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G18210		ATPUP10	purine permease 10 (.1)		Lus10026130 [exp]	0	1
AT5G14180		MPL1	Myzus persicae-induced lipase ...		Lus10023171 [exp]	3.0	0.8549
AT4G18380			F-box family protein (.1.2)		Lus10013431 [exp]	5.3	0.8692
AT5G60740		ABCG28	ATP-binding cassette G28, ABC ...		Lus10016115 [exp]	6.2	0.8335
AT1G62340		ALE1	ABNORMAL LEAF-SHAPE 1, ABNORMA...		Lus10015559 [exp]	8.0	0.8391
AT5G16080		ATCXE17	carboxyesterase 17 (.1)		Lus10033548 [exp]	8.5	0.8346
					Lus10013654 [exp]	8.9	0.8782
AT4G38830		CRK26	cysteine-rich RLK (RECEPTOR-li...		Lus10002371 [exp]	9.5	0.8681
AT1G13570			F-box/RNI-like superfamily pro...		Lus10028369 [exp]	13.0	0.7791
AT4G09740		ATGH9B14	glycosyl hydrolase 9B14 (.1)		Lus10017525 [exp]	13.9	0.7937
AT2G42280	bHLH	bHLH130	basic helix-loop-helix (bHLH) ...		Lus10037484 [exp]	15.3	0.8639

Compare expression of checked genes

Lus10026130 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.