Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G14470 590 / 0 NB-ARC domain-containing disease resistance protein (.1) AT3G14460 485 / 4e-146 LRR and NB-ARC domains-containing disease resistance protein (.1) AT1G58602 197 / 8e-51 LRR and NB-ARC domains-containing disease resistance protein (.1.2) AT3G50950 192 / 9e-50 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 (.1.2) AT1G53350 192 / 1e-49 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G58848 188 / 4e-48 Disease resistance protein (CC-NBS-LRR class) family (.1), Disease resistance protein (CC-NBS-LRR class) family (.2) AT1G59218 188 / 4e-48 Disease resistance protein (CC-NBS-LRR class) family (.1), Disease resistance protein (CC-NBS-LRR class) family (.2) AT1G50180 186 / 6e-48 NB-ARC domain-containing disease resistance protein (.1) AT1G58410 186 / 9e-48 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G59780 185 / 2e-47 NB-ARC domain-containing disease resistance protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026109 [exp] 2315 / 0 AT3G14470 598 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Lus10005321 [exp] 1114 / 0 AT3G14460 607 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10039509 [exp] 680 / 0 AT3G14460 613 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10024173 [exp] 632 / 0 AT3G14460 681 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10039540 [exp] 620 / 0 AT3G14470 727 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Lus10007261 [exp] 610 / 0 AT3G14460 654 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10005218 [exp] 402 / 3e-118 AT3G14470 379 / 2e-113 NB-ARC domain-containing disease resistance protein (.1) Lus10003571 [exp] 377 / 1e-111 AT3G14470 363 / 6e-110 NB-ARC domain-containing disease resistance protein (.1) Lus10004126 [exp] 359 / 4e-105 AT3G14470 353 / 6e-106 NB-ARC domain-containing disease resistance protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G261600 [exp] 1060 / 0 AT3G14470 628 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.004G194800 [exp] 1009 / 0 AT3G14470 622 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.001G261300 [exp] 894 / 0 AT3G14470 538 / 2e-170 NB-ARC domain-containing disease resistance protein (.1) Potri.004G196100 [exp] 823 / 0 AT3G14470 647 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.001G029300 [exp] 701 / 0 AT3G14470 676 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.007G137101 [exp] 675 / 0 AT3G14470 616 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.003G055600 [exp] 657 / 0 AT3G14470 615 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.001G025400 [exp] 649 / 0 AT3G14470 558 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.017G015600 [exp] 646 / 0 AT3G14470 591 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.T126806 [exp] 642 / 0 AT3G14470 587 / 0.0 NB-ARC domain-containing disease resistance protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00931 [flax] [poplar] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Lus10026132 pacid=23173128 polypeptide=Lus10026132 locus=Lus10026132.g ID=Lus10026132.BGIv1.0 annot-version=v1.0 ATGGCCAGCCTTTGTGTCTGGGTTCCTCGATGGGTTCATCAAGCAGAAATGAAATACTCCACTACAGTCCCCAGTGATCCTGACACTCATGAAGATTTCC GCCCTAGTAATAAGATCGAAAAGTCTGACGTAGCTTTGAAAGACATTGTTGAGCAGGATGTAAGGGAGAACCCTGTGATGATATACATGAAAGGAGTCCC TGAGTTTCCTCAATGTGGATTTAGTGCATTGGCTGTGAGAGTACTGAAACTGTACATTCTGGAAGCTCCCGAGGGCGGAAATGTTAAGTCTCTTCAATAC CCATTTGTTTATCTGGGGTTTTTGATTCCACGATCCTCTAGATTTGAATTCATACTGTATGTAATGGTGTTCAACACGAAGCTGATTCGAAAGCTGGGAA CCCATGAATTCCTCGTGTATTTTCGTCAAGCAGAAGAAGTCCTGGCTGAATTCAAGATGTGGGAGAGTCTGCTGAGGAAGATATATGCTGCGCTTGATGA TGCTGAGGAGAAACAAATGACTAGCAGGTTGGTGAGTATATGGGTAAGTGAGCTTCGAGACTTGGCTTATGATGCGGAAGATGTGCTTGATTCGTTTTCT ACAGAGCAACTGAGGAGGAAGCTTAAGGAAGAAACTGTTTCTTCAAGTACAAGTAAGATTCAAGGCCTGATCCCTGGTTGTTTCTCTGGCATCAGTCTGC AAACGCTTAAGTTCAATGTTGAAATGATGTCAAAGATTCAGGACATCACTGCCAGATTGCGGAAGATCACGGCGGATAAAGATGATCTGGATCTAAAGAA TATTTCTGGGAGGTCAATGATGGGCCATCAACCCACTGAAAGATTGCCAACTACTTCTCTGGTCAATGAAAACAGGGTTTATGGGAGGGAGAAAGATGAG CAGGCCATTTTACAAGTTCTAAAAGCTGAGGCAGCGGATGTTGATGTATCCCTGATCCCAATAATTGGTATGGGAGGCCTAGGTAAGACTACCCTTGCAC AACTTGTTCTTAGTCGTGCCAAAACAGAGTTTGATTTTACAGCTTGGGTTTCAGTTGGTGAAGACTTTGATGTCTACAGGATCACCAAGACCATTTTAGG CTCGGGCGTCTCTGAGGGTATGGATTTACATTCACTCCAAGAGAAGTTGAAGGAGAAGTTAGCTAGAAAGAAATTTCTTATTGTTCTTGACGACGTTTGG AACGAGAGCTATGAAAAATGGGTACTTTGTCGAGCTCCACTTGAAAATGGATCTTCAGGAAGCAAAATAGTCGTTACTACTCGTAATGCAAGTGTTGCAT CAATCATGGGTACTGATCCCCCGTATCTTCTCAAGGAGTTGGCTTTTAATGGTTGCCTTTCTCTATTTACGGAGCATGCTTTGGGAACAAGAACGTTTGC AGCCCACTCCAATCTGGAAGAGATTGGTAACAAAATTGTACAAAAATGTAAAGGTTTACCTTTAGCTGTTAAGGCTATGGGTGGTCTATTACGAGGTAAT CAGAATCCCAGGCAATGGGAAGAAGTGTTGAACAGCGAGATATGGGAGTTTCCTGAGAGGAATGGTGTTCTTCCTGCCTTGAGAGTGAGCTACTATCACC TCCCTTCGCATTTGAAGCAATGCTTTACTTATTGTGGAATATTGCCAAAGGACTTCGACTTTGAAGAGGATGAGTTGGTCTTATTGTGGATGGCAGAGGG CTTTCTAGCGCAGGCAAAGGAAAAGAAGTATGCAAAGGACTTGGGCCATAGATATTTTTGTGATTTAGTTTCAAGATCATTCTTCCAACAATCAAATGAG GACCAATCTAAATTCACCATGCATGACTTAATAAATGATCTGGCTGAGTTTGAGAGTAGAAGGATATGTTTCAAGTTGGATGGCAGGTTGGAAGAGGCAA ATTCTTGTTTGAATGTTCGCCACGCATCTTTCAACCGCCATGTATATGATTTGTTGCCAAGATTTGAAGTCTTCAGCTATATGAAGAACCTGCGATCGTT CTTGCCCTTGCCATTCCCAACATATCAAGGGTACTTTCTGTCCCACAAAGTGCTGTTTGAGTTGATACCAGCACTAAGACATCTGAGGGTACTCTCGTTA GCTGGTTATAAATTGGAGAAGTTACCAGAACTGATTTTTTCTCTACAGCATTTACGGTATCTCAACTTTTCTTACACTGATATTGTTGCCTTGCCTGAAC TGGTTGGTGAGCTTGTCAACTTGCAAACTTTCAGATTACAAGGGTGTCAGAGACTTGTTGAATTGCCAAGAAGTATAGGCAATTTGATCAACCTACAGTG GCTTGACAACCGAGAAACATACAGCTTGCAAGAGCTTCCAGCAGAGATAGCCAAGTTGAGAAATCTCATTACTTTACCCAAGTTTGTAGTAGGGAAGAGG AAGGGGCTCGGAATACAAGACTTGGGAAAGTTGACTCTACTTCAAGGAAAGCTTCACATAAAAGGATTGTGTAATGTTCTGAACACCCAAGATGCGGAGC TTGCTGATATGAAACACAAGCAAGGTGTTGAGGATTTGGCCTTGGAATGGTCTTCTAACTTCCAATGCTCCTGTAACGCAACAAACGAATTCAAGGTGTT AAACTTACTGATGCCTCATCTGAAATTGAAAAGGCTTCGTGTTGAGTTTTATGCTGGCATACAGTTCGCAACATGGGTTGGAGATCCCAAGTTTGCTGAT ATGGTGCATTTAGAGCTCATGCATTGTATGAAAATCGAGTCACTTCCGCCACTTGGACAGCTTCCTTTGCTTATGACGCTAGCAATTGGTGGCCTGCATG GAGTGAAAGAAGTTGGAGCAGAATTTTATGGGGAAAGTAATTCAACCGGTCCCTTTCCAGCATTGGAGACTCTAAGAATACAGTATATGCCGGAGTTGGT AGAGTGGTCTTGTTTTGCAGGTGTTACTGAAAGGTCTACCGTGTGTTTCCCCAATTTGCTTTATCTTACAGTCAGGGATTGCCCCAAGTTGATTGGACAA TTGCCAAACTCCCTACCTTGCCTCCAAAGACTGGAAATTTGGCGGTGCCCACAGTTGGCTAATCTACCCGAAACGCTTTCATCTCTGTCGGAATTAGATA TCAATGACTGTGACAAGGTGATTCCCATAAACGTTTGCAGTCTAAAATCCCTTGCAACGTTAAGCCTCGAGAAACTTGCAAGCCCTGCCAGTATGCAGGA CGTGTTCATAGAAGGCTTGAGGGGGCTTGCTTGTTTGAAGGATTTAAATATTAAAGAATGTGATCAGCTTTTGTGCCTAGGAGAAGGAGCGGAAGGGCTT CTACCCTCTAGTCTTGAATCCATGTGGATACGCCATTGCCCGAAACTTGAGAATCTATCAAATGGACTCCACAAGCTCACACATCTCAGCAGGTTGTATG TTCAGCGTTGCCCAAAGCTTGTGTCCTTTGGCGAACAAGGCGTTCCATCCAGCATTTGTGATGTGTTAGTCTCACGTTGTCCTTCTTTGAAGTCTTTGGT TATAAGAGATATGAACACAATCGAGGATAGCAATCAAACGTCCTATCATCTTGAGAGATTGACTCTTCATGGATGTTCCTCTCTCACGATCTTCCCCACA GGCGTGTTTATTGAATCATTGAAGAACCTAACTATCTGCAACCTTACAACACAGTCCTTAGAAGAACTATGCCATCATGCTCTTCCTCACCTCACAAATC TATCAATTGAAGGAAGTCCTGAGTTAGAGAGTTTCCCAGACATTGCATTGCCTAATCTCCATATCATCAAATCGCTCAGGATTCAGGACTGCAGTAATTT GGGGTCTCTTCCCAACCAGTTGCCAGAGCTCACCTCTCTTCTGCGCTTGGAGGTATCTGGCTGCGGGAGTTTAAAGTCTTTCCCGAAAGGTGGATTTCCT CCGAACCTGCTCGCGCTTATGATCACAGATTGCGAGACTCTCATGCAACCAATATCTGAATGGGGAATTAGCAGACTTACTTCGCTGAAATGGCTTGCGA TCAGAAGCGAATGTCCTAGTACTAGGGTATCTTGCTTCCCAGATGATGAAGGGATTTGGCTTCCAACATCACTCACCTATCTCCTCATTTCAAAATTCAG TGTGCTTAAGTCTGTATCCAGAGGCCTCAGATGTCTCACCTCTCTGGAGGAGTTGTTGATAATGTACTGCCCAAAGCTTCAGTCTTTACCAAAGGAGGGA CTTCCCCTATCACTTGGAAGCTTAAAGCTGCACGCATGTCCTGGTTTGAAGAATGTCAAGAAACAGTATCTGAAACAGAAAGGAGAATATTGGACAGCGA TGCAACAGATACCTTGTGTGGGAATTGATTCTGTTGAATCTGGCTCATTTTCATACGTGCTACACTTCGCTAGAAGATGTACACTGCTGGTGGCATACTT GAAGCCTGTGGTGATAGAAGATTTTGAGGATTCTTGCAAAGGCATTGCCAATATGTTCAAAGGGTTCGATAACAAGCCTACCTACTTGTGGAATCTCCAC TTCTCCGATAACTTTTTCAGGTTGATGTCCATGACTAGGTTGATGTCCATGCTCCGCTGCGGAAATGGTCCTCGCAACGCAGATTTGGCAACTTGTAAGC GCAAGTTCGTAGAGAGAGGACAAAGGTGCCCCGTTCTGTTCAAGTGA
AA sequence Show only first row Show all	>Lus10026132 pacid=23173128 polypeptide=Lus10026132 locus=Lus10026132.g ID=Lus10026132.BGIv1.0 annot-version=v1.0 MASLCVWVPRWVHQAEMKYSTTVPSDPDTHEDFRPSNKIEKSDVALKDIVEQDVRENPVMIYMKGVPEFPQCGFSALAVRVLKLYILEAPEGGNVKSLQY PFVYLGFLIPRSSRFEFILYVMVFNTKLIRKLGTHEFLVYFRQAEEVLAEFKMWESLLRKIYAALDDAEEKQMTSRLVSIWVSELRDLAYDAEDVLDSFS TEQLRRKLKEETVSSSTSKIQGLIPGCFSGISLQTLKFNVEMMSKIQDITARLRKITADKDDLDLKNISGRSMMGHQPTERLPTTSLVNENRVYGREKDE QAILQVLKAEAADVDVSLIPIIGMGGLGKTTLAQLVLSRAKTEFDFTAWVSVGEDFDVYRITKTILGSGVSEGMDLHSLQEKLKEKLARKKFLIVLDDVW NESYEKWVLCRAPLENGSSGSKIVVTTRNASVASIMGTDPPYLLKELAFNGCLSLFTEHALGTRTFAAHSNLEEIGNKIVQKCKGLPLAVKAMGGLLRGN QNPRQWEEVLNSEIWEFPERNGVLPALRVSYYHLPSHLKQCFTYCGILPKDFDFEEDELVLLWMAEGFLAQAKEKKYAKDLGHRYFCDLVSRSFFQQSNE DQSKFTMHDLINDLAEFESRRICFKLDGRLEEANSCLNVRHASFNRHVYDLLPRFEVFSYMKNLRSFLPLPFPTYQGYFLSHKVLFELIPALRHLRVLSL AGYKLEKLPELIFSLQHLRYLNFSYTDIVALPELVGELVNLQTFRLQGCQRLVELPRSIGNLINLQWLDNRETYSLQELPAEIAKLRNLITLPKFVVGKR KGLGIQDLGKLTLLQGKLHIKGLCNVLNTQDAELADMKHKQGVEDLALEWSSNFQCSCNATNEFKVLNLLMPHLKLKRLRVEFYAGIQFATWVGDPKFAD MVHLELMHCMKIESLPPLGQLPLLMTLAIGGLHGVKEVGAEFYGESNSTGPFPALETLRIQYMPELVEWSCFAGVTERSTVCFPNLLYLTVRDCPKLIGQ LPNSLPCLQRLEIWRCPQLANLPETLSSLSELDINDCDKVIPINVCSLKSLATLSLEKLASPASMQDVFIEGLRGLACLKDLNIKECDQLLCLGEGAEGL LPSSLESMWIRHCPKLENLSNGLHKLTHLSRLYVQRCPKLVSFGEQGVPSSICDVLVSRCPSLKSLVIRDMNTIEDSNQTSYHLERLTLHGCSSLTIFPT GVFIESLKNLTICNLTTQSLEELCHHALPHLTNLSIEGSPELESFPDIALPNLHIIKSLRIQDCSNLGSLPNQLPELTSLLRLEVSGCGSLKSFPKGGFP PNLLALMITDCETLMQPISEWGISRLTSLKWLAIRSECPSTRVSCFPDDEGIWLPTSLTYLLISKFSVLKSVSRGLRCLTSLEELLIMYCPKLQSLPKEG LPLSLGSLKLHACPGLKNVKKQYLKQKGEYWTAMQQIPCVGIDSVESGSFSYVLHFARRCTLLVAYLKPVVIEDFEDSCKGIANMFKGFDNKPTYLWNLH FSDNFFRLMSMTRLMSMLRCGNGPRNADLATCKRKFVERGQRCPVLFK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G14460			LRR and NB-ARC domains-contain...		Lus10026132 [exp]	0	1
AT5G43900		XI-6, XI-2, ATM...	MYOSIN XI-6, MYOSIN X1 2, ARAB...		Lus10023696 [exp]	1.7	0.8736
AT5G01450			RING/U-box superfamily protein...		Lus10002487 [exp]	4.2	0.8721
AT1G65580		FRA3	FRAGILE FIBER3, Endonuclease/e...		Lus10024112 [exp]	5.5	0.8373
AT3G14205			Phosphoinositide phosphatase f...		Lus10013184 [exp]	7.9	0.8658
AT1G55535			unknown protein		Lus10010333 [exp]	8.4	0.8299
AT3G14205			Phosphoinositide phosphatase f...		Lus10037446 [exp]	12.0	0.8412
AT1G01650		ATSPPL4	ARABIDOPSIS THALIANA SIGNAL PE...		Lus10017796 [exp]	13.9	0.8027
AT1G76390		PUB43	plant U-box 43, ARM repeat sup...		Lus10043453 [exp]	14.0	0.8048
AT3G05345			Chaperone DnaJ-domain superfam...		Lus10029916 [exp]	14.1	0.8249
AT4G32272			Nucleotide/sugar transporter f...		Lus10006645 [exp]	17.8	0.8370

Compare expression of checked genes

Lus10026132 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.