Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G10960 790 / 0 ATAZG1 AZA-guanine resistant1 (.1) AT5G50300 463 / 3e-158 ATAZG2 ARABIDOPSIS THALIANA AZA-GUANINE RESISTANT2, Xanthine/uracil permease family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012895 [exp] 901 / 0 AT3G10960 873 / 0.0 AZA-guanine resistant1 (.1) Lus10009102 [exp] 700 / 0 AT3G10960 780 / 0.0 AZA-guanine resistant1 (.1) Lus10025246 [exp] 700 / 0 AT3G10960 780 / 0.0 AZA-guanine resistant1 (.1) Lus10040894 [exp] 456 / 1e-155 AT5G50300 691 / 0.0 ARABIDOPSIS THALIANA AZA-GUANINE RESISTANT2, Xanthine/uracil permease family protein (.1) Lus10034287 [exp] 60 / 4e-11 AT5G50300 91 / 1e-22 ARABIDOPSIS THALIANA AZA-GUANINE RESISTANT2, Xanthine/uracil permease family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G083300 [exp] 808 / 0 AT3G10960 903 / 0.0 AZA-guanine resistant1 (.1) Potri.016G133800 [exp] 751 / 0 AT3G10960 847 / 0.0 AZA-guanine resistant1 (.1) Potri.015G090000 [exp] 490 / 1e-168 AT5G50300 736 / 0.0 ARABIDOPSIS THALIANA AZA-GUANINE RESISTANT2, Xanthine/uracil permease family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0062 [flax] [poplar] APC PF00860 [flax] [poplar] Xan_ur_permease Permease family
Representative CDS sequence Show only first row Show all	>Lus10030548 pacid=23140656 polypeptide=Lus10030548 locus=Lus10030548.g ID=Lus10030548.BGIv1.0 annot-version=v1.0 ATGGTAGACATGAACGACGACCCGGAATCTCCTCCGCCGCCACTACCACCGCCGATGGCGGCCAAACCATCCTTCCTCGCAGGACTCAACTCCGCCGTCG CCGCCTCCTCAATCGGCAAGCGGTTCAAACTCGACGCGCGCAACACCTCCTTCACCACCGAGCTCCGCGCCGGCACTGCCACGTTCCTAACCATGGCCTA CATCCTCGCCGTCAACGCCTCCATCCTCACAGACAGCGGCGGAACCTGCTCCGTCTCCGATTGCCTCCCTCTCTGCTCCGACCCCACAATTCCCCTCACT CAATGCACCCGGGTCATCCAACCCGACTCCTCCTGCAAATTCGACCCGGTCAACCCGGGATACTCTGCCTGTCTTGACCGAACCAGAAAGGACCTAATCG TCGCCACCGTCGCTTCCTCTTTAATCGGATGCTTAATCATGGGGGTTTTCGCTAATCTCCCTCTAGCTCTCGCTCCTGGAATGGGAGCTAACGCCTATTT CGCTTACACAGTCGTCGGATTCCATGGATCTGGAAACGTATCGTATCAGAGCGCTCTGGCAGCGGTTTTCATCGAGGGATTGATTTTCTTAGCAATTTCG GCTGTTGGGTTGAGAGCTCGATTAGCCAAATTGGTTCCCAAACCGGTTCGAATCAGCTCATCGGCCGGAATCGGACTCTTTTTGGCGTTCATCGGCTTAC AGAGCAATCAAGGGATCGGTTTGATCGGTTACAGCTCATCAACTCTAGTCACACTCGGAGCCTGCCCGAAATCGTCCCGTGTTGCGTTGGCTCCGGTGAA CGGAACAGGCAGCTTACTCGCCGGCGGAACTATCTCCGGCGACATCCTCTGCCTCGACAGCCGAATGGAAAGCCCCACTTTCTGGCTTGGAATCGTTGGA TTCGTAATCATAGCTTACTGCTTGGTGAAGGAGATCAAAGGAGCTATGATTTACGGGATCGTGGTCGTAACCGCCGTCTCCTGGTTCTGTCACACGAAGG TAACGGCGTTTCCCGATGATGCCGCGGGAGACGCGGCGTACGACTATTTTAGGAAAGTAGTCGACGTCCACGTCATCGGGTCGACGGCGGGCGCGCTGAG CTTCAAATCGATCGGGTCGGGTCAGTTCTGGGAGGCGGTGGTGACTTTTCTATACGTGGATATTTTGGACACGACGGGGACGCTTTACTCAATGGCGAGA TTCGCCGGATTCGCTGACGAGAATGGCGATTTCGAAGGGCAGTATTTTGCGTTTATGTCGGATGCCACGTCGATTGTGGTGGGGTCGCTTCTGGGGACGT CGCCGGTGACGGCGTTTATCGAGTCGTCGACGGGGATAAGGGAAGGAGGGAGGACGGGGATAACGGCGTTGACGGTGGCAGGGTACTTCTTCTTGGCGTT CTTCTTCACGCCGTTGCTGGCTTCGATTCCGGCATGGGCGGTGGGGCCGCCGCTGATTTTGGTCGGGGTTCTGATGATGAGATCGGTGGTGGAGATTGAT TGGAACGACATGAGGCAGGCGATCCCGGCGTTCGTTACGTTGATTTTGATGCCGTTGACTTACTCGATCGCGTACGGTCTGATCGGCGGGATCGGGACTT ACGTGGTGCTGAACGCACTGGATTGGGCGGAGGGCGGTTTGGTAAAATTGGGGGTTCTGAAGAAACGCGGCGGCGGCGGTGGGAATGGCGGCAGTGACGG GGCGGTGGGCGGTAGGGCGGCGGTGGCGGTGGTGGTTTTGATGGGTCCCACGGGGAACGGATAG
AA sequence Show only first row Show all	>Lus10030548 pacid=23140656 polypeptide=Lus10030548 locus=Lus10030548.g ID=Lus10030548.BGIv1.0 annot-version=v1.0 MVDMNDDPESPPPPLPPPMAAKPSFLAGLNSAVAASSIGKRFKLDARNTSFTTELRAGTATFLTMAYILAVNASILTDSGGTCSVSDCLPLCSDPTIPLT QCTRVIQPDSSCKFDPVNPGYSACLDRTRKDLIVATVASSLIGCLIMGVFANLPLALAPGMGANAYFAYTVVGFHGSGNVSYQSALAAVFIEGLIFLAIS AVGLRARLAKLVPKPVRISSSAGIGLFLAFIGLQSNQGIGLIGYSSSTLVTLGACPKSSRVALAPVNGTGSLLAGGTISGDILCLDSRMESPTFWLGIVG FVIIAYCLVKEIKGAMIYGIVVVTAVSWFCHTKVTAFPDDAAGDAAYDYFRKVVDVHVIGSTAGALSFKSIGSGQFWEAVVTFLYVDILDTTGTLYSMAR FAGFADENGDFEGQYFAFMSDATSIVVGSLLGTSPVTAFIESSTGIREGGRTGITALTVAGYFFLAFFFTPLLASIPAWAVGPPLILVGVLMMRSVVEID WNDMRQAIPAFVTLILMPLTYSIAYGLIGGIGTYVVLNALDWAEGGLVKLGVLKKRGGGGGNGGSDGAVGGRAAVAVVVLMGPTGNG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G10960		ATAZG1	AZA-guanine resistant1 (.1)		Lus10030548 [exp]	0	1
AT3G10960		ATAZG1	AZA-guanine resistant1 (.1)		Lus10012895 [exp]	1.0	0.8626
AT3G15410			Leucine-rich repeat (LRR) fami...		Lus10043086 [exp]	9.8	0.7005
AT1G76600			unknown protein		Lus10012442 [exp]	14.6	0.7439
AT1G09250	bHLH	bHLH149, AIF4	basic helix-loop-helix (bHLH) ...		Lus10031425 [exp]	23.2	0.6885
AT5G19450		CPK8, CDPK19	calcium-dependent protein kina...		Lus10014907 [exp]	39.3	0.7060
AT3G59480			pfkB-like carbohydrate kinase ...		Lus10020346 [exp]	45.4	0.7015
AT3G54880			unknown protein		Lus10038690 [exp]	52.0	0.6130
AT1G07630		PLL5	pol-like 5 (.1)		Lus10040823 [exp]	54.2	0.6876
AT4G16820		PLA-I{beta]2	phospholipase A I beta 2, alph...		Lus10010997 [exp]	59.2	0.6992
AT1G30040		ATGA2OX2	GIBBERELLIN 2-OXIDASE 2, gibbe...		Lus10023311 [exp]	65.7	0.6265

Compare expression of checked genes

Lus10030548 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.