Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G18210 283 / 1e-92 ATPUP10 purine permease 10 (.1) AT1G44750 278 / 7e-91 ATPUP11 purine permease 11 (.1.2.3) AT4G18220 271 / 1e-88 Drug/metabolite transporter superfamily protein (.1) AT4G18197 251 / 2e-80 PEX17, ATPUP7, AT4G18200 PEROXIN 17, ARABIDOPSIS THALIANA PURINE PERMEASE 7, purine permease 7 (.1) AT4G18190 249 / 8e-80 ATPUP6 purine permease 6 (.1) AT4G08700 243 / 2e-77 ATPUP13 Drug/metabolite transporter superfamily protein (.1) AT4G18195 237 / 7e-75 ATPUP8, AT4G18200 ARABIDOPSIS THALIANA PURINE PERMEASE 8, purine permease 8 (.1) AT4G18205 233 / 3e-73 AT4G18200 Nucleotide-sugar transporter family protein (.1) AT5G41160 225 / 2e-70 ATPUP12 ARABIDOPSIS THALIANA PURINE PERMEASE 12, purine permease 12 (.1) AT1G28220 158 / 5e-45 ATPUP3 purine permease 3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10040118 [exp] 572 / 0 AT4G18210 336 / 2e-113 purine permease 10 (.1) Lus10043350 [exp] 286 / 9e-94 AT1G44750 456 / 8e-161 purine permease 11 (.1.2.3) Lus10019503 [exp] 283 / 5e-93 AT1G44750 452 / 1e-159 purine permease 11 (.1.2.3) Lus10028132 [exp] 273 / 4e-88 AT4G18220 361 / 4e-123 Drug/metabolite transporter superfamily protein (.1) Lus10008689 [exp] 263 / 5e-85 AT4G18210 382 / 3e-131 purine permease 10 (.1) Lus10026130 [exp] 261 / 3e-84 AT4G18210 382 / 2e-131 purine permease 10 (.1) Lus10038492 [exp] 233 / 4e-73 AT4G18210 344 / 3e-116 purine permease 10 (.1) Lus10012606 [exp] 157 / 1e-47 AT1G44750 103 / 8e-28 purine permease 11 (.1.2.3) Lus10042836 [exp] 145 / 7e-43 AT4G18220 155 / 2e-47 Drug/metabolite transporter superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G147600 [exp] 401 / 6e-139 AT4G18210 315 / 7e-105 purine permease 10 (.1) Potri.001G352100 [exp] 300 / 3e-99 AT4G18210 398 / 1e-137 purine permease 10 (.1) Potri.001G352200 [exp] 299 / 3e-99 AT4G18220 315 / 1e-105 Drug/metabolite transporter superfamily protein (.1) Potri.014G043900 [exp] 282 / 1e-92 AT1G44750 434 / 2e-152 purine permease 11 (.1.2.3) Potri.005G160300 [exp] 152 / 2e-42 AT1G28220 413 / 8e-145 purine permease 3 (.1) Potri.006G184900 [exp] 125 / 2e-32 AT2G24220 404 / 6e-141 purine permease 5 (.1.2) Potri.002G099600 [exp] 117 / 2e-29 AT1G28220 229 / 2e-72 purine permease 3 (.1) Potri.003G156900 [exp] 100 / 5e-23 AT1G30840 323 / 4e-108 purine permease 4 (.1.2) Potri.001G074100 [exp] 94 / 3e-21 AT1G30840 303 / 5e-101 purine permease 4 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0184 [flax] [poplar] DMT PF03151 [flax] [poplar] TPT Triose-phosphate Transporter family
Representative CDS sequence Show only first row Show all	>Lus10030927 pacid=23166707 polypeptide=Lus10030927 locus=Lus10030927.g ID=Lus10030927.BGIv1.0 annot-version=v1.0 ATGGAACAACTTCAACGCCGCCGGCTACCAAGCCTCATCCACTACAAATGGTGGATCCGAATAACCTGCTACATCTTTTCCCTCCTCTGCGGCCAATCCA CCGCCACTCTCCTCGGCCGCCTCTACTACGACAAGGGCGGCAACAGTAAATGGCTAGCTACTTTCGTCCAATCCGCCGGATTCCCCCTTCTCCTCCCTCT GCTCTTCTTCCTCCCCTCGCCGCTCCCGCAGCACTCCGCCGTTAACCACAAACCCAAACATCCGTTCCTCCTCTTTCCTCTAATCTACCTAGGGTTCGGC CTCCTCCTCACCGCCGACAACCTAATGTACTCATACGGCCTCCTCTACCTCCCCGTCTCAACATACTCCCTCCTCTGCGCCACTCAGTTGGCTTTCAACG CTGTCTTCTCCTTCTTCATCAACAAGCAGAAATTCACCATGTTCATCCTCAACTCGCTGGTACTCCTCACCCTCTCCGCTTCTCTCCTCGCCGTCAATTC CGAATCCGATTCCAGTTCGGGAGGAGGACGGTCCAAGTACGCAATCGGTTTCCTAACAACCATCGGCGCCTCCGCAGGTTATGCCCTCTACCTTTCCCAA CTCCAGCTCACATTCGATCGATTGTCGAAGACATCTGCGGTGGCGGAAAAGGAGGCGGGTCCGTTGTTTGCGGCGGTGGTGGAGATGCAGTTCTACCCGT CGGCGGTGGCAACGGCGGGATGCGTGGTGGGGTTATTCGCGAGCGGGGAGTGGAAGGGGTTGGAAGATGAGATGAAGGGTTACAGGCAGGGGAAAGCGGC GTACTTGTTGAATCTGATTTGGACGGTGATTGGGTGGCAGGTTTCTTCGTTGGGGCTTTTGGGGTTGGTATACGAGGTGTCGTCGTTGTTTTCGAATGTG ATTAGTACGCTGGCTTTGCCGGCGGTTCCGATTCTGGCGGTGGTGATTTTCGGTGATAAGATGGATGGGGTGAAGGCGGTGGCGATGGTACTGGCCTTTT GGGGGTTTGTTTCTTATATCTATCAGCACTATTTAGATGATCGGTCTAAGGTGATTTCGGCGGCGATGGTTGATGGTGGTGGTGGTGATGGCATGGAAGG TCAGAGAAGAGCTGATCAGCGGGTGGAGATGTGCTAA
AA sequence Show only first row Show all	>Lus10030927 pacid=23166707 polypeptide=Lus10030927 locus=Lus10030927.g ID=Lus10030927.BGIv1.0 annot-version=v1.0 MEQLQRRRLPSLIHYKWWIRITCYIFSLLCGQSTATLLGRLYYDKGGNSKWLATFVQSAGFPLLLPLLFFLPSPLPQHSAVNHKPKHPFLLFPLIYLGFG LLLTADNLMYSYGLLYLPVSTYSLLCATQLAFNAVFSFFINKQKFTMFILNSLVLLTLSASLLAVNSESDSSSGGGRSKYAIGFLTTIGASAGYALYLSQ LQLTFDRLSKTSAVAEKEAGPLFAAVVEMQFYPSAVATAGCVVGLFASGEWKGLEDEMKGYRQGKAAYLLNLIWTVIGWQVSSLGLLGLVYEVSSLFSNV ISTLALPAVPILAVVIFGDKMDGVKAVAMVLAFWGFVSYIYQHYLDDRSKVISAAMVDGGGGDGMEGQRRADQRVEMC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G18210		ATPUP10	purine permease 10 (.1)		Lus10030927 [exp]	0	1
AT3G19615			unknown protein		Lus10042265 [exp]	1.0	0.9551
AT2G05940		RIPK	RPM1-induced protein kinase, P...		Lus10033429 [exp]	3.3	0.9408
AT5G44390			FAD-binding Berberine family p...		Lus10001965 [exp]	6.0	0.9466
					Lus10020728 [exp]	7.4	0.9461
AT4G35070			SBP (S-ribonuclease binding pr...		Lus10019790 [exp]	9.6	0.9277
AT5G36930			Disease resistance protein (TI...		Lus10014671 [exp]	10.2	0.9490
AT2G15490		UGT73B4	UDP-glycosyltransferase 73B4 (...		Lus10014086 [exp]	12.2	0.9259
AT2G31945			unknown protein		Lus10013740 [exp]	12.4	0.9450
AT1G06620			2-oxoglutarate (2OG) and Fe(II...		Lus10027585 [exp]	13.0	0.9359
AT5G47230	AP2_ERF	ATERF5, ATERF-5...	ETHYLENE RESPONSIVE ELEMENT BI...		Lus10007841 [exp]	13.1	0.8846

Compare expression of checked genes

Lus10030927 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.