Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G28220 246 / 4e-79 ATPUP3 purine permease 3 (.1) AT1G28230 229 / 2e-72 ATPUP1, PUP1 purine permease 1 (.1) AT2G33750 216 / 1e-67 ATPUP2 purine permease 2 (.1.2) AT4G18220 132 / 2e-35 Drug/metabolite transporter superfamily protein (.1) AT1G44750 122 / 8e-32 ATPUP11 purine permease 11 (.1.2.3) AT4G18210 122 / 2e-31 ATPUP10 purine permease 10 (.1) AT1G30840 119 / 2e-30 ATPUP4 purine permease 4 (.1.2) AT4G18190 119 / 3e-30 ATPUP6 purine permease 6 (.1) AT4G08700 103 / 1e-24 ATPUP13 Drug/metabolite transporter superfamily protein (.1) AT5G41160 102 / 2e-24 ATPUP12 ARABIDOPSIS THALIANA PURINE PERMEASE 12, purine permease 12 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026807 [exp] 600 / 0 AT1G28220 273 / 7e-90 purine permease 3 (.1) Lus10008212 [exp] 374 / 5e-129 AT1G28220 293 / 7e-97 purine permease 3 (.1) Lus10008713 [exp] 372 / 3e-128 AT1G28220 288 / 2e-95 purine permease 3 (.1) Lus10020939 [exp] 363 / 3e-125 AT1G28220 286 / 9e-95 purine permease 3 (.1) Lus10008714 [exp] 360 / 9e-124 AT1G28220 286 / 7e-95 purine permease 3 (.1) Lus10020937 [exp] 302 / 2e-101 AT1G28220 258 / 3e-84 purine permease 3 (.1) Lus10020950 [exp] 261 / 7e-85 AT1G28220 448 / 3e-158 purine permease 3 (.1) Lus10015906 [exp] 246 / 1e-79 AT1G28220 406 / 2e-142 purine permease 3 (.1) Lus10041133 [exp] 243 / 3e-78 AT1G28220 392 / 1e-136 purine permease 3 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G099600 [exp] 297 / 3e-99 AT1G28220 229 / 2e-72 purine permease 3 (.1) Potri.005G160300 [exp] 244 / 2e-78 AT1G28220 413 / 8e-145 purine permease 3 (.1) Potri.014G043900 [exp] 141 / 9e-39 AT1G44750 434 / 2e-152 purine permease 11 (.1.2.3) Potri.001G352200 [exp] 139 / 6e-38 AT4G18220 315 / 1e-105 Drug/metabolite transporter superfamily protein (.1) Potri.001G352100 [exp] 132 / 4e-35 AT4G18210 398 / 1e-137 purine permease 10 (.1) Potri.001G147600 [exp] 130 / 2e-34 AT4G18210 315 / 7e-105 purine permease 10 (.1) Potri.006G184900 [exp] 120 / 7e-31 AT2G24220 404 / 6e-141 purine permease 5 (.1.2) Potri.003G156900 [exp] 116 / 4e-29 AT1G30840 323 / 4e-108 purine permease 4 (.1.2) Potri.001G074100 [exp] 97 / 2e-22 AT1G30840 303 / 5e-101 purine permease 4 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0184 [flax] [poplar] DMT PF03151 [flax] [poplar] TPT Triose-phosphate Transporter family CL0184 [flax] [poplar] DMT PF00892 [flax] [poplar] EamA EamA-like transporter family
Representative CDS sequence Show only first row Show all	>Lus10036075 pacid=23141127 polypeptide=Lus10036075 locus=Lus10036075.g ID=Lus10036075.BGIv1.0 annot-version=v1.0 ATGTTGCTAACAGTGGGGCAAGTTGCAGGTCCAATGCTTTTCAGGATATACTTCACCCACGGCGGCCAAAAGCGATGGCTAGCAGCTTGGTCATGCACAG CAGGTTTCCCAGTCTTGATCATCCCAATCGCCATTTCCTACACATCATCATCATCATCATCATCATCAAGCATACTGACACGGCACCGTTTCTTCCTCAT CAGCAGATGGCTACTGGGAACGAGTGTACTGGTGGGCATAATCCTCTCCTTCGAATGCTACCTGGCCTTCTTCGGGATTTCCTACCTGCCCGTTTCGGTT CACTCACTGGTCAGCTCGTCCCAGCTGGTTTTCACGGCGGTGTTCGCTTTCTTTATGGTCAGGCAGAAGTTCACTCCCTACTCGATAAACGCCGTCGTTC TGATGACCCTGGGATCCCTCGTCATGGGCCTCCACATGAATTCGGATATCCCCGATGGAGAATCTCCGCGTAAATATCTGGTCGGTTTTGTCATGTCCGT CGGAGCTGCTTGTGCTCATGGTCTTTTCTTGACTTTGACCGAGTATGCTCAAGCTAAGGCGGCTACTTCTAGTGTTGCCATGACTTTCCCCATGGCCATG CAAGTCCAGTTCGTCATCTCCATGGCTGCCACGCTCGTTTCTACCGTTCCCATGATTATCAACGGTGATTTTCAGACGATGGGGAAAGAGGCGGCGGAAT TTGGGCTAGGGGAGAAGAAATACTATCTGATAATAATAATGGGGATAATATCGCTGGAGGGGAGTATAATAGGTGCAATTGGAGTAGCGATGAGCTCGTC GTCTCTGTTTGCGGGGATCATGTGCTCGCTTCTAGTGCCAGTCCAACAGTTGTGTGCCGTAATATTTTTGAAAGAAGGGTTCAATGTGGACAGGGGAATG GCGTTGGGGCTGTGCCTGTGGGGATTTGCTTCCCATTTGTACGGAGGTTACAAGGATACATCAAAAGTAGGCAAGCACAAGCAGCTCATCACTACAGTAC CGCCACAGGTTATAACCAATGAGCAACTCTAG
AA sequence Show only first row Show all	>Lus10036075 pacid=23141127 polypeptide=Lus10036075 locus=Lus10036075.g ID=Lus10036075.BGIv1.0 annot-version=v1.0 MLLTVGQVAGPMLFRIYFTHGGQKRWLAAWSCTAGFPVLIIPIAISYTSSSSSSSSSILTRHRFFLISRWLLGTSVLVGIILSFECYLAFFGISYLPVSV HSLVSSSQLVFTAVFAFFMVRQKFTPYSINAVVLMTLGSLVMGLHMNSDIPDGESPRKYLVGFVMSVGAACAHGLFLTLTEYAQAKAATSSVAMTFPMAM QVQFVISMAATLVSTVPMIINGDFQTMGKEAAEFGLGEKKYYLIIIMGIISLEGSIIGAIGVAMSSSSLFAGIMCSLLVPVQQLCAVIFLKEGFNVDRGM ALGLCLWGFASHLYGGYKDTSKVGKHKQLITTVPPQVITNEQL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G28220		ATPUP3	purine permease 3 (.1)		Lus10036075 [exp]	0	1
AT5G59310		LTP4	lipid transfer protein 4 (.1)		Lus10029226 [exp]	2.6	0.9155
AT2G21400		SRS3	SHI-related sequence3 (.1)		Lus10017492 [exp]	10.4	0.8381
AT3G58360			TRAF-like family protein (.1)		Lus10012948 [exp]	12.6	0.8921
AT5G10530			Concanavalin A-like lectin pro...		Lus10029555 [exp]	15.9	0.8720
AT1G47530			MATE efflux family protein (.1...		Lus10002367 [exp]	19.6	0.8456
AT3G14470			NB-ARC domain-containing disea...		Lus10011278 [exp]	29.8	0.8847
AT5G65010		ASN2	asparagine synthetase 2 (.1.2)		Lus10031300 [exp]	33.0	0.8394
AT4G23100		ATECS1, CAD2, G...	ROOT MERISTEMLESS 1, PHYTOALEX...		Lus10002001 [exp]	33.0	0.8627
AT1G16310			Cation efflux family protein (...		Lus10009598 [exp]	35.5	0.8789
AT1G25520			Uncharacterized protein family...		Lus10021697 [exp]	35.9	0.8425

Compare expression of checked genes

Lus10036075 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.