Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G69550 357 / 7e-103 disease resistance protein (TIR-NBS-LRR class) (.1) AT5G36930 345 / 7e-100 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) AT1G27170 342 / 8e-98 transmembrane receptors;ATP binding (.1.2) AT5G17680 315 / 4e-89 disease resistance protein (TIR-NBS-LRR class), putative (.1) AT5G49140 301 / 5e-86 Disease resistance protein (TIR-NBS-LRR class) family (.1) AT1G27180 308 / 6e-86 disease resistance protein (TIR-NBS-LRR class), putative (.1) AT5G41540 302 / 7e-86 Disease resistance protein (TIR-NBS-LRR class) family (.1) AT4G16890 302 / 2e-84 BAL, SNC1 SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1, BALL, disease resistance protein (TIR-NBS-LRR class), putative (.1) AT2G14080 299 / 7e-84 Disease resistance protein (TIR-NBS-LRR class) family (.1) AT1G63870 290 / 1e-81 Disease resistance protein (TIR-NBS-LRR class) family (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023272 [exp] 1083 / 0 AT5G36930 423 / 4e-126 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10035674 [exp] 989 / 0 AT5G36930 410 / 1e-121 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10038533 [exp] 950 / 0 AT1G27170 386 / 7e-114 transmembrane receptors;ATP binding (.1.2) Lus10037406 [exp] 942 / 0 AT5G36930 395 / 5e-116 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10010574 [exp] 912 / 0 AT5G36930 397 / 4e-119 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10020238 [exp] 902 / 0 AT1G69550 391 / 7e-117 disease resistance protein (TIR-NBS-LRR class) (.1) Lus10042714 [exp] 901 / 0 AT5G36930 411 / 3e-124 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10026961 [exp] 890 / 0 AT5G36930 420 / 2e-126 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10004911 [exp] 889 / 0 AT1G27170 387 / 5e-115 transmembrane receptors;ATP binding (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G142600 [exp] 390 / 4e-118 AT5G36930 535 / 5e-173 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.007G143300 [exp] 397 / 1e-117 AT5G36930 519 / 2e-162 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T002300 [exp] 390 / 2e-116 AT5G36930 635 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.003G014200 [exp] 389 / 5e-116 AT5G36930 673 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T002400 [exp] 383 / 2e-115 AT5G36930 658 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T002200 [exp] 383 / 2e-115 AT5G36930 617 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T005501 [exp] 386 / 5e-115 AT5G36930 612 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.012G135700 [exp] 385 / 6e-115 AT5G36930 640 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.019G003285 [exp] 385 / 3e-114 AT5G36930 640 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Potri.T001933 [exp] 385 / 3e-114 AT5G36930 617 / 0.0 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0173 [flax] [poplar] STIR PF01582 [flax] [poplar] TIR TIR domain CL0023 [flax] [poplar] P-loop_NTPase PF00931 [flax] [poplar] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Lus10038482 pacid=23158204 polypeptide=Lus10038482 locus=Lus10038482.g ID=Lus10038482.BGIv1.0 annot-version=v1.0 ATGGCTTCAATATCGTGTTTTTCAATTGCACTCACCGCTTTGGATCTTCTCCGGAGCTCCAGTGGTGGATTATCCAATATCCTTCTGACTCTGAGAACCC TAGAGTGTCGCAATTTGGGGGTTCCACCTCCAGAACTAGACATTTCTCCATCATTGCCAAGCTACGAAGGACAAGGAAGCAGCAATTTCCCCACCGGTTT TTTTCGGACTGAAATGGAGAAGATCTGGTCTGGTTCTCTTCCACCTGAATCCCTCCCTCTTCCAGCAGGAGACTATGAGGTTTTCCTGAGCTTTAGGGGC CCCGACGTCCGCCGAACCTTTGCAGATTGTATCTATAGGTTCCTGCACCATTATCGGATTCGTATCTTTTTTGACGATGTAGACCTTCCCAAGGGGGAAG ACACTGCCTCCAGCCTCATCAAGGCGATTGAGGAATCAAAGATCTATATCCCAATCTTCTCCCCGGACTATGCTGCTAGTAAATGGTGCCTTATGGAGCT AGCTCATGTGGTGAAGTGCTATGAGAAAAGAAAGGGCCACCTCATCCTGCCCATATTCTATTTTGTAGAGCCAAGAGAGGTGCGGGGTCAAGAGGGTTCT TTTGGGGAAGCATTTCGACAGCTCGCCAAGGGATATGATGCAGAAATAGTAAAAAAATGGAAGGAAGCTCTCCGAAAGGCTGGGGAAGGAAAGGGATGGC CTGTGACTGAATCAGATGGACAGGGAGCTATTATTACTGATGTTTTTTATACGGTGAGGTCACATCTGATGCAGAGTTACAAGTTAGTGACTGAGGAGTT GGTTGGAATTGATCCCCATGTAGAACAAGTGACAAAACTACTGAAGAAAGAAGTGAAAATAGTTGGCATTCAAGGTATGAGTGGTATTGGTAAGACCAGT ATAGCCAAAGCCGTCTGCGACAAGGTTCATACACAATTTCATCGACGTTGTTTTGTGGAAAACGTAAGAGAAATATTGTCAGGGAATGATGGGGTTGTGA CTTTACAGAACAAGATTCTATCAAGCATTCTAGGGGATGATACCGAGATTAGAGATGCTAGTCAAGGAATCCGAAAAATAAAAGATAGATTTGGCTGCAG GGACAGCGTTCTCATTGTTCTGGATGATGTATGTGAGAAGTTTGAGTTTGGCAGTACCTTGGGAAATTTAAAGGATTTTACCTCAAAAAGTCGATTTATT ATTACTACAACGGATGAGAGAGTCATGGAGTTGTTTCAAGAATATGAGTTGTACCAACCAGGGGAGATGAGCTATGATAATGGTCTTCAACTTTTTTGTA GACATGCCTTTGAGATGGATTATCCTCCGCAAGATTTCATGGCTCTATCTAAGGACTTTGTTAAAGCTGCAGCAGGTCTCCCTTTGGCTCTTAAGGCCAT AGGTTCACACCTTTTCCGCAAATGTAAAAGTTTTTGGGATGACAAGTTGAAACAATTTCGGGACATACCTCCTGTCAAGGTGCAAGAGAGATTGAAGATA ATCTATAACGAGCTGACTCCAGAGGAAAAACGTATCTTTCTTGATATTGCTTGTTATTTTATTGGAGAACATTATGATCTACCTTCATTCATGTGGAGTG ATTTGGAGTTGTATCCAAGAATTGTGATTGAAACTCTTCGTCTTAAGTCATTGATTAAAATCGATGATAGAATGCGATTCTGGATGCATGATCAATATAA AAACCTTGGTAGAGCTATTGTTCGTAATGAAGACGCTCAAAATCCGTGGAAACGCAGCAGAATGTTGTCCAACAAGGATGTGTTGGACATGTTAAGAGAT AAAGAGGGAACTGAGCAGTTGGAAATCTTGAAAGTTGACATGAGAGGTGAAGATTTTGAGCTGACAGACAATGAATTCAAGAAATTATCTGGCTTAAAAT ATCTAGATGTGAGGAATGGAAGATTAACTGGAGATTTTAAAGACATTCTTCCACATGTACGCTGTCTTCGACTGGATAACTGTACTTCGGTCCCCGTTGA TTTCAGCTCGAAGAAATTGGTAGTCCTTTATTTTGAGATGTGCTCAATAACGGATGATTGGAAAGGCTGGAATGATATTAAGGTGTCACCCAAGCTTAAA GTTGTGGATGTACGGTCTTGTCGGGATTTAGAGACGGCTCCCAACTTGTCTCAGTGTCGAAGTCTAGAGCGTTTAATACTTCAGGACTGTCAGAAGATGA GAGGGGAACTGCATATTGGTAATTTTAAGAGTCTGAAAGTGCTGAAGCTCTGGTCTACTAAAATAACGAAGTTAACAGGCTGCATTGGAGTTCTTAAGAA TCTCCAGGAGATTGATGCAGGGAACTCCTATTTGATAGAAGTGCCTGCTGGTATTAGCAAATTATCCTCTCTTGAAACCTTGGATATAAGGTCGCATAAG TTCGGATCGAAGGAATTACCAACACTCCCTAAAAGTTTAAAGCGCCTGTATCTCTCATCCCCACGAGTACCTAACCTTTTGGAGCTCAAGGACTTGGAAG AGCTATGGTTTTCCAATTGTGATGCTCCTGAAATTCCAGGGAATATATGGATGCTATCCAAGTTGAAGTCTTTGATTCTGTCGGACTGCCGCTGTGAAAG TCTGCTGGTCAGGACGACAATTGGACCTGCTCTCCCATCATCTCTAAACAGGCTTAGTATTAAGTGGTGCACACCTCTGAAGAGTCTGCCAAATTTGGCG AATTTTAATAAATTGACAGAACTAGTTTTGACTTGTGTTGGAGTAAGTGAGATCACTGGCCTTGGAGTGGTCAAAATGCTTGAGACTTTGACAATATCTG GTGCTCCTAATCTGACTAATCTCAATGGCCTTGAACATCTAGTGCTTCTCAAGAAATTGCATCTGGAAAGCTGTGATGTGCTGGAAAGACTACCCAGCCT CTCTAATTTGACCCAGTTACAAACCCTAGAAATTTCGTCCTGTGGCCTCATCCGTAAAATCGAAGGCCTGGAAAAACTGGGGGAGTCTTTGTCCTGTCTG GAAATCAGTGGTCCCAGTGCAGCAAGTACTCTGCGGTCTCTAGCGAATCTGGCTAAACTGACAAAGTTATCCTTGGAATTTCTTGGAACTGACATCAACC AACCATTGTCACCAGAGCTAGTCCTTGATTTCTCCCGTCTGCAGTATATAGAGAAATTGTCTATTATTGGCTGCGAACAGCTGACAGAGGTCAATGGGAT CGGGAAGTTGGAATTTCTGCAATCGTTACGTCTGCCAGGTTGCAAATCGATCAAGCATGTACCGGATCTTTCTGGTATCAAGAATCTAAGGTTTTTAGAT ATTCAAAGATGCACACAATTGACCGAGGTTAAAGGGCTCGAGAACTTGGAGTCGTTCGGAGGGCTAAATATGTCACGCTGTACATCAATGAAGGAGCTTC CAAGTTTGTTCAGAGATACAAGCTCCTTGAAAGTTAGTGGTTGCAAGCAGCTGACCGAGTTATCGGGACTGGAGAAATTGGAGTCACTGCAGCTTCTAGA TATGACTAACTGCACATCGATTCGCAAGTTGCCGGATCTCTCTATTTTCAACGATTTGGTTACCTTGCATGTTAAGGGATGCGTACAGTTGACTCATCTT TCTGGAATTGAGAGATTGGAGTCATTGATCGTGCTGAACATGGATGGAAAGTTAAGAGACCAGTATCGAGATCTCCTGCAAGTTATCAAAAATCGATGGA ACGATTGA
AA sequence Show only first row Show all	>Lus10038482 pacid=23158204 polypeptide=Lus10038482 locus=Lus10038482.g ID=Lus10038482.BGIv1.0 annot-version=v1.0 MASISCFSIALTALDLLRSSSGGLSNILLTLRTLECRNLGVPPPELDISPSLPSYEGQGSSNFPTGFFRTEMEKIWSGSLPPESLPLPAGDYEVFLSFRG PDVRRTFADCIYRFLHHYRIRIFFDDVDLPKGEDTASSLIKAIEESKIYIPIFSPDYAASKWCLMELAHVVKCYEKRKGHLILPIFYFVEPREVRGQEGS FGEAFRQLAKGYDAEIVKKWKEALRKAGEGKGWPVTESDGQGAIITDVFYTVRSHLMQSYKLVTEELVGIDPHVEQVTKLLKKEVKIVGIQGMSGIGKTS IAKAVCDKVHTQFHRRCFVENVREILSGNDGVVTLQNKILSSILGDDTEIRDASQGIRKIKDRFGCRDSVLIVLDDVCEKFEFGSTLGNLKDFTSKSRFI ITTTDERVMELFQEYELYQPGEMSYDNGLQLFCRHAFEMDYPPQDFMALSKDFVKAAAGLPLALKAIGSHLFRKCKSFWDDKLKQFRDIPPVKVQERLKI IYNELTPEEKRIFLDIACYFIGEHYDLPSFMWSDLELYPRIVIETLRLKSLIKIDDRMRFWMHDQYKNLGRAIVRNEDAQNPWKRSRMLSNKDVLDMLRD KEGTEQLEILKVDMRGEDFELTDNEFKKLSGLKYLDVRNGRLTGDFKDILPHVRCLRLDNCTSVPVDFSSKKLVVLYFEMCSITDDWKGWNDIKVSPKLK VVDVRSCRDLETAPNLSQCRSLERLILQDCQKMRGELHIGNFKSLKVLKLWSTKITKLTGCIGVLKNLQEIDAGNSYLIEVPAGISKLSSLETLDIRSHK FGSKELPTLPKSLKRLYLSSPRVPNLLELKDLEELWFSNCDAPEIPGNIWMLSKLKSLILSDCRCESLLVRTTIGPALPSSLNRLSIKWCTPLKSLPNLA NFNKLTELVLTCVGVSEITGLGVVKMLETLTISGAPNLTNLNGLEHLVLLKKLHLESCDVLERLPSLSNLTQLQTLEISSCGLIRKIEGLEKLGESLSCL EISGPSAASTLRSLANLAKLTKLSLEFLGTDINQPLSPELVLDFSRLQYIEKLSIIGCEQLTEVNGIGKLEFLQSLRLPGCKSIKHVPDLSGIKNLRFLD IQRCTQLTEVKGLENLESFGGLNMSRCTSMKELPSLFRDTSSLKVSGCKQLTELSGLEKLESLQLLDMTNCTSIRKLPDLSIFNDLVTLHVKGCVQLTHL SGIERLESLIVLNMDGKLRDQYRDLLQVIKNRWND

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G69550			disease resistance protein (TI...		Lus10038482 [exp]	0	1
AT4G02570		AXR6, ATCUL1	AUXIN RESISTANT 6, cullin 1 (....		Lus10032200 [exp]	7.5	0.8647
					Lus10018257 [exp]	16.6	0.8341
AT1G36990			unknown protein		Lus10028037 [exp]	19.7	0.8427
AT5G67530		ATPUB49	plant U-box 49 (.1)		Lus10004731 [exp]	22.8	0.8397
AT2G31260		ATAPG9, APG9	autophagy 9 (APG9) (.1)		Lus10003567 [exp]	23.2	0.8610
AT4G23050			PAS domain-containing protein ...		Lus10024502 [exp]	34.3	0.8097
AT1G09660			RNA-binding KH domain-containi...		Lus10035768 [exp]	35.8	0.8039
AT5G05980		ATDFB, FPGS1	folylpolyglutamate synthetase ...		Lus10004694 [exp]	36.0	0.8236
AT5G36930			Disease resistance protein (TI...		Lus10023487 [exp]	37.1	0.8205
AT5G61980		AGD1	ARF-GAP domain 1 (.1)		Lus10036018 [exp]	37.3	0.8153

Compare expression of checked genes

Lus10038482 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.