Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G18210 269 / 2e-87 ATPUP10 purine permease 10 (.1) AT1G44750 268 / 5e-87 ATPUP11 purine permease 11 (.1.2.3) AT4G18220 241 / 9e-77 Drug/metabolite transporter superfamily protein (.1) AT4G18197 223 / 2e-69 PEX17, ATPUP7, AT4G18200 PEROXIN 17, ARABIDOPSIS THALIANA PURINE PERMEASE 7, purine permease 7 (.1) AT4G08700 220 / 2e-68 ATPUP13 Drug/metabolite transporter superfamily protein (.1) AT4G18195 213 / 2e-65 ATPUP8, AT4G18200 ARABIDOPSIS THALIANA PURINE PERMEASE 8, purine permease 8 (.1) AT4G18190 212 / 4e-65 ATPUP6 purine permease 6 (.1) AT4G18205 204 / 4e-62 AT4G18200 Nucleotide-sugar transporter family protein (.1) AT5G41160 202 / 1e-61 ATPUP12 ARABIDOPSIS THALIANA PURINE PERMEASE 12, purine permease 12 (.1) AT1G28220 138 / 2e-37 ATPUP3 purine permease 3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10030927 [exp] 517 / 0 AT4G18210 336 / 1e-113 purine permease 10 (.1) Lus10043350 [exp] 266 / 1e-85 AT1G44750 456 / 8e-161 purine permease 11 (.1.2.3) Lus10019503 [exp] 263 / 6e-85 AT1G44750 452 / 1e-159 purine permease 11 (.1.2.3) Lus10028132 [exp] 246 / 2e-77 AT4G18220 361 / 4e-123 Drug/metabolite transporter superfamily protein (.1) Lus10008689 [exp] 243 / 5e-77 AT4G18210 382 / 3e-131 purine permease 10 (.1) Lus10026130 [exp] 241 / 5e-76 AT4G18210 382 / 2e-131 purine permease 10 (.1) Lus10038492 [exp] 201 / 1e-60 AT4G18210 344 / 3e-116 purine permease 10 (.1) Lus10012606 [exp] 159 / 2e-48 AT1G44750 103 / 8e-28 purine permease 11 (.1.2.3) Lus10042836 [exp] 148 / 1e-43 AT4G18220 155 / 2e-47 Drug/metabolite transporter superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G147600 [exp] 355 / 5e-121 AT4G18210 315 / 7e-105 purine permease 10 (.1) Potri.001G352100 [exp] 268 / 1e-86 AT4G18210 398 / 1e-137 purine permease 10 (.1) Potri.001G352200 [exp] 267 / 2e-86 AT4G18220 315 / 1e-105 Drug/metabolite transporter superfamily protein (.1) Potri.014G043900 [exp] 260 / 4e-84 AT1G44750 434 / 2e-152 purine permease 11 (.1.2.3) Potri.005G160300 [exp] 132 / 4e-35 AT1G28220 413 / 8e-145 purine permease 3 (.1) Potri.006G184900 [exp] 112 / 1e-27 AT2G24220 404 / 6e-141 purine permease 5 (.1.2) Potri.002G099600 [exp] 99 / 6e-23 AT1G28220 229 / 2e-72 purine permease 3 (.1) Potri.003G156900 [exp] 73 / 5e-14 AT1G30840 323 / 4e-108 purine permease 4 (.1.2) Potri.001G074100 [exp] 69 / 1e-12 AT1G30840 303 / 5e-101 purine permease 4 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0184 [flax] [poplar] DMT PF03151 [flax] [poplar] TPT Triose-phosphate Transporter family
Representative CDS sequence Show only first row Show all	>Lus10040118 pacid=23173836 polypeptide=Lus10040118 locus=Lus10040118.g ID=Lus10040118.BGIv1.0 annot-version=v1.0 ATGGAACAACTTCAACGCCGCCGGCTACCAAGCCTCATCCACTACAAATGGTGGATCCGAATAACCTACTACATCTTTTCCCTCCTCTGCGGACAATCTG CCGCCACTCTCCTCGGCCGCCTCTACTACGACAAGGGCGGCAACAGTAAATGGCTAGCTACTTTTGTCCAATCCGCCGGATTCCCACTTCTCTTCCCTCT GCTCTTCTTCCTCCCCTCGCTGCCGCCGCAGCATTCCGCCGTTAATTACAAACCGAAACCTCCGTTCCTCCTCTTTCCTTTAATCTACCTAGGGTTCGGC CTCCTCCTCACCGCCGACAACTTAATGTACTCATACGGCCTCCTTTACCTCCCAGTCTCAACTTACTCGCTCCTCTGCGCCACTCAGTTGGCTTTCAACG CCGTCTTCTCCTTCTTCATCAACAAGCAGAAATTCACCATGTTCATCCTCAACTCGCTGGTGCTCCTCACACTCTCCGCCTCCCTCCTCGCCGTCAATTC CGAATCCGATTCCGATTCGGGAGGACGGTCCTCCAAGTACGCAATCGGATTCCTCACCACCATCGGCGCCTCCGCCGGCTACTCCCTCTACCTTTCCCTA CTCCAGCTCACCTTCGATCGATTGTCGAAGAAATCGGGAGCGATAGAGGGAAAGGATGCGGATCCGTTGTTCGCGGCGGTGGTGGAGATGCAGTTCTATC CGTCGGCGGTGGCCACGGCGGGATGTGTGGTGGGGTTATTCGCGAGCGGGGAGTGGAAGGGTTTGGAAGATGAGATGAAAGGTTACAGGCAGGGGAAAGC GGCGTACCTGTTGAATCTGATTTGGACCGCGATTGGGTGGCAGGTTTCGTCGTTGGGGCTTTTGGGGTTGGTTTACGAGGTGTCGTCGTTGTTTTCGAAT GTGATTAGTACTCTGGCTCTGCCGGCGGTTCCGATTCTGGCGGTGGTGATTTTCGGCGATAAGATGGATGGGGTGAAGGCGGTGGCGATGGTGCTGGCCT TTTGGGGGTTTGTTTCTTATATTTATCAGCACTATTTAGATGATCGATCTAATGTGATTTCGGCGGAGGTGGTTGATGGTGGTGGTGGTGGTGGTGGTGG TGGTGATGGTGTGGAAGGTCAGAGAAGAGCTGATCAACGGGTGGAGATGTGTTAA
AA sequence Show only first row Show all	>Lus10040118 pacid=23173836 polypeptide=Lus10040118 locus=Lus10040118.g ID=Lus10040118.BGIv1.0 annot-version=v1.0 MEQLQRRRLPSLIHYKWWIRITYYIFSLLCGQSAATLLGRLYYDKGGNSKWLATFVQSAGFPLLFPLLFFLPSLPPQHSAVNYKPKPPFLLFPLIYLGFG LLLTADNLMYSYGLLYLPVSTYSLLCATQLAFNAVFSFFINKQKFTMFILNSLVLLTLSASLLAVNSESDSDSGGRSSKYAIGFLTTIGASAGYSLYLSL LQLTFDRLSKKSGAIEGKDADPLFAAVVEMQFYPSAVATAGCVVGLFASGEWKGLEDEMKGYRQGKAAYLLNLIWTAIGWQVSSLGLLGLVYEVSSLFSN VISTLALPAVPILAVVIFGDKMDGVKAVAMVLAFWGFVSYIYQHYLDDRSNVISAEVVDGGGGGGGGGDGVEGQRRADQRVEMC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G18210		ATPUP10	purine permease 10 (.1)		Lus10040118 [exp]	0	1
AT1G60500		DRP4C	Dynamin related protein 4C (.1...		Lus10025903 [exp]	2.4	0.9639
AT5G08460			GDSL-like Lipase/Acylhydrolase...		Lus10028685 [exp]	3.2	0.9425
AT5G36930			Disease resistance protein (TI...		Lus10029921 [exp]	3.6	0.9653
					Lus10041745 [exp]	6.3	0.9365
AT4G01250	WRKY	ATWRKY22, WRKY2...	WRKY family transcription fact...		Lus10032303 [exp]	7.1	0.9517
AT2G05920			Subtilase family protein (.1)		Lus10006689 [exp]	7.3	0.9414
AT2G43590			Chitinase family protein (.1)		Lus10003587 [exp]	11.1	0.9463
AT3G50470		MLA10, HR3	INTRACELLULAR MILDEW A 10, hom...		Lus10009328 [exp]	15.6	0.9181
AT1G16160		WAKL5	wall associated kinase-like 5 ...		Lus10013143 [exp]	16.2	0.9111
AT1G20870			HSP20-like chaperones superfam...		Lus10007642 [exp]	16.4	0.9235

Compare expression of checked genes

Lus10040118 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.