Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	KUP7.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G09400 1082 / 0 KUP7 K+ uptake permease 7, K+ uptake permease 7 (.1) AT4G33530 1026 / 0 KUP5 K+ uptake permease 5, K+ uptake permease 5 (.1) AT1G60160 780 / 0 Potassium transporter family protein (.1) AT4G13420 524 / 1e-174 HAK5, ATHAK5 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) AT4G19960 518 / 8e-172 KT9, HAK9, ATKUP9 K+ uptake permease 9, K+ uptake permease 9 (.1), K+ uptake permease 9 (.2) AT1G31120 506 / 2e-167 KUP10 K+ uptake permease 10, K+ uptake permease 10 (.1) AT2G35060 500 / 4e-165 KUP11 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) AT2G40540 476 / 5e-156 ATKUP2, ATKT2, TRK2, SHY3, KT2 potassium transporter 2 (.1.2) AT5G14880 468 / 5e-153 Potassium transporter family protein (.1) AT3G02050 459 / 3e-149 ATKT4, ATKUP3, KUP3 K+ uptake transporter 3, ARABIDOPSIS THALIANA POTASSIUM TRANSPORTER 4, K+ uptake transporter 3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G023900 [exp] 1248 / 0 AT5G09400 1120 / 0.0 K+ uptake permease 7, K+ uptake permease 7 (.1) Potri.010G094400 [exp] 793 / 0 AT1G60160 1209 / 0.0 Potassium transporter family protein (.1) Potri.001G069650 [exp] 551 / 0 AT4G13420 951 / 0.0 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) Potri.001G045200 [exp] 546 / 0 AT4G13420 978 / 0.0 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) Potri.014G132500 [exp] 523 / 3e-174 AT4G13420 852 / 0.0 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) Potri.003G109700 [exp] 521 / 2e-173 AT2G35060 1155 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) Potri.001G123800 [exp] 518 / 5e-172 AT2G35060 1149 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) Potri.014G144900 [exp] 510 / 4e-169 AT3G02050 1175 / 0.0 K+ uptake transporter 3, ARABIDOPSIS THALIANA POTASSIUM TRANSPORTER 4, K+ uptake transporter 3 (.1) Potri.001G123700 [exp] 495 / 2e-163 AT2G35060 1047 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003402 [exp] 1140 / 0 AT5G09400 1296 / 0.0 K+ uptake permease 7, K+ uptake permease 7 (.1) Lus10036160 [exp] 1093 / 0 AT5G09400 1204 / 0.0 K+ uptake permease 7, K+ uptake permease 7 (.1) Lus10012993 [exp] 763 / 0 AT1G60160 1237 / 0.0 Potassium transporter family protein (.1) Lus10027004 [exp] 533 / 2e-178 AT4G13420 828 / 0.0 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) Lus10025493 [exp] 531 / 3e-177 AT4G13420 826 / 0.0 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) Lus10013304 [exp] 515 / 5e-170 AT4G13420 950 / 0.0 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) Lus10018324 [exp] 501 / 2e-165 AT2G35060 1212 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) Lus10030857 [exp] 497 / 4e-164 AT1G70300 1249 / 0.0 K+ uptake permease 6, K+ uptake permease 6 (.1) Lus10038361 [exp] 488 / 8e-161 AT2G35060 1164 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) Lus10012992 [exp] 484 / 3e-159 AT1G70300 1188 / 0.0 K+ uptake permease 6, K+ uptake permease 6 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0062 [poplar] [flax] APC PF02705 [poplar] [flax] K_trans K+ potassium transporter
Representative CDS sequence Show only first row Show all	>Potri.001G205500.1 pacid=42788885 polypeptide=Potri.001G205500.1.p locus=Potri.001G205500 ID=Potri.001G205500.1.v4.1 annot-version=v4.1 ATGGCAGAGGAGAATGGCGTTGGCAGATCCGAGATAAACGGTAGATTTGCTTCGAATGACTCGATGGAGTTACGGTGGGTGTTCCAAGACGACGACGACG ACGACGATGATGATTCAGTGATGGACGACGACAACGGCAACGACAATAGTAGACAGCGGCACGGCGGTGGATTAGAATCTGACGAGGAAGATGAAGAGGA CACAGGTGAGCAACGGCTGTTTCGAACTGGCCCCCTCATCGACTCCTTCGATGTGGAAGCCCTGGAGATCCCGAGCGCCCACCGCAACGATAATTACTAC GAGGAGTTGGGTGTGGGAAGGAGAATAATACTTGCATTTCAAACACTGGGAGTTGTATTTGGTGATGTTGGAACCAGTCCTTTGTATACTTTTGGTGTTA TGTTTACAAAGGCGCCTATCAATGGAGAAGAAGATGTTGTTGGTGCATTGTCTTTGGTTTTGTACACTTTAATCTTGATTCCACTTCTCAAGTATGTTCT TGTTGTTCTTTGGGCTAATGACGACGGCGAAGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTCGACATGCTAAGGTCAATCTTCTCCCTAATCAGCTT CCTTCCGATGCTCGTATATCTAGCTTCAGGCTTAAGGTGCCCTCCCCAGAACTTGAGAGATCTTTGAAAATCAAGGAGAGACTTGAGACTTCGGTTACTC TCAAAAGATTGCTTCTCATGTTAGTGCTTGCTGGTACCTCTATGTTAATTGCTGATGGGGTTGTTACTCCTGCTATGTCAGTAATGTCAGCTGTTGGTGG TCTGAAGGTTGGAGTAGCTGCAATTGAGCAAGAGCATGTGGTGATGATTTCAGTTGCCTTTCTTGTAATTTTGTTCAGTGTACAGAAGTTTGGGACCAGT AAAGTCGGACTTGTTGTAGGCCCTGCTTTATTCTTGTGGTTTTGTTCTCTTGCAGCCATTGGGATTTATAACCTTGTTAAATATGATAGCAGTGTCTTAA GGGCATTTAATCCTGTTCATATTTATTACTTCTTCAAGAGGAACTCAACTAAGGCCTGGCGTGCACTTGGAGGCTGCTTGCTATGTGCAACAGGATCTGA GGCAATGTTTGCAGATCTGTGCTACTTTTCTGTGAGATCTGTGCAGCTTACCTTTGTATTTCTCGTTTTGCCTTGCCTTTTGTTGGGTTATTTGGGCCAA GCTGCATACCTTGTGGAACATCACACTGAAAATATGGCTGAGCTAGCTTTCTTTTCTTCGGTTCCAAGTGGTGTTTTCTGGCCTGTCTTCCTCATTGCTA ACTTAGCTGCATTAATTGCTAGTCGGACTATGACTACTGCTACGTTTTCGTGTATAAAACAATCAACAGCACTTGGTTGCTTCCCCCGTCTTAAAATCAT TCATACCTCTCGGAAATTCATGGGTCAGATTTATATTCCTGTCATAAACTGGTTTTTGCTGGTAGTTTGCTTGGTGTTTGTCTGCTCTATCTCAAGCATC ACTGAGATGGGAAATGCATATGGAATTGCTGAGCTGGGGGTGATGATGATGACAGTGATTTTAGTAACTATTGTTATGCTTCTTATATGGCAGATAAACA TCATTATTGTCCTGAGTTTTTTGGTTATTTTCCTTGGAATAGAGTTGGCCTTTTTCTCATCAGTTCTAGGGGGCATGGGAGATGGAAGTTGGATAATACT GGTTTTTGCTGTAGTTATGTTTCTTATAATGTTAGTCTGGAACTATGGGAGCAAGCTCAAGTATGAAACTGAAGTTAAGCAAAAGCTTTCCATGGATTTG ATGCGTGAATTGGGACCCAATCTTGGAACAATCAGAGCCCCGGGCATTGGTTTGCTTTATAATGAACTGGTGAAAGGAATACCTGCAATTTTTGGCCATT TTCTTACTACTCTCCCTGCTATCCATTCAATGATTATATTTGTGAGTGTAAAGTATGTTCCAGTTCCAGTAGTGCCTCAGGGTGAAAGATTCCTTTTCCG ACGAGTCTGCCCAAAAGGCTACCACATATTCCGTTGTATTGCGAGGTATGGCTACAAGGATGCTCGGAAAGAGAATCAGCAGGCATTTGAACAGCTGTTA ATTGAGAGCCTTGAGAAGTTCATTCGTCGGGAAGCCCAGGAACGTTTGTTAGAGAGTGATGGGGATGATGATACAGACTATGAGGATGACTCCTCTAGTA CAAGAGTCTTAATAGCTCCCAATGGAAGTGTCTACTCACTTGGTGTGCCCCTACTAGCCGAGTACAGCAACACAAGCAAGCCCATTTCTGAAGCAAGCAC ATCTGAGGCGGCAAAGCCAGGGACGCCTGGAGACCCTACAGGTTCTGATGCAGAACAGAGTCTTGAAAGGGAATTGTCTTTTGTTCGCAAGGCTAAAGAA TCTGGGGTTGTATATCTTCTTGGGCATGGAAACATTAGGGCAAGGAAGGATTCCTGGTTTATCAAGAAGCTGGTCGTAAACTACTTCTATGCTTTTCTGA GAAAGAACTGTAGAAGAGGGATTGCGAATATGAGTGTACCCCACTCACATCTCATGCAGGTTGGCATGACTTACATGGTTTGA
AA sequence Show only first row Show all	>Potri.001G205500.1 pacid=42788885 polypeptide=Potri.001G205500.1.p locus=Potri.001G205500 ID=Potri.001G205500.1.v4.1 annot-version=v4.1 MAEENGVGRSEINGRFASNDSMELRWVFQDDDDDDDDDSVMDDDNGNDNSRQRHGGGLESDEEDEEDTGEQRLFRTGPLIDSFDVEALEIPSAHRNDNYY EELGVGRRIILAFQTLGVVFGDVGTSPLYTFGVMFTKAPINGEEDVVGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRHAKVNLLPNQL PSDARISSFRLKVPSPELERSLKIKERLETSVTLKRLLLMLVLAGTSMLIADGVVTPAMSVMSAVGGLKVGVAAIEQEHVVMISVAFLVILFSVQKFGTS KVGLVVGPALFLWFCSLAAIGIYNLVKYDSSVLRAFNPVHIYYFFKRNSTKAWRALGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQ AAYLVEHHTENMAELAFFSSVPSGVFWPVFLIANLAALIASRTMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVVCLVFVCSISSI TEMGNAYGIAELGVMMMTVILVTIVMLLIWQINIIIVLSFLVIFLGIELAFFSSVLGGMGDGSWIILVFAVVMFLIMLVWNYGSKLKYETEVKQKLSMDL MRELGPNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVSVKYVPVPVVPQGERFLFRRVCPKGYHIFRCIARYGYKDARKENQQAFEQLL IESLEKFIRREAQERLLESDGDDDTDYEDDSSSTRVLIAPNGSVYSLGVPLLAEYSNTSKPISEASTSEAAKPGTPGDPTGSDAEQSLERELSFVRKAKE SGVVYLLGHGNIRARKDSWFIKKLVVNYFYAFLRKNCRRGIANMSVPHSHLMQVGMTYMV

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G09400		KUP7	K+ uptake permease 7, K+ uptak...		Potri.001G205500 [exp]	0	1	KUP7.1
AT5G47490			RGPR-related (.1)		Potri.001G157800 [exp]	3.00	0.7887
AT5G62440			Protein of unknown function (D...		Potri.013G021800 [exp]	4.89	0.7625
AT4G02680		EOL1	ETO1-like 1 (.1)		Potri.005G214400 [exp]	6.00	0.7832
AT1G69420			DHHC-type zinc finger family p...		Potri.010G163200 [exp]	6.48	0.7745
AT3G14720		ATMPK19	ARABIDOPSIS THALIANA MAP KINAS...		Potri.011G102500 [exp]	6.92	0.7988	Pt-TDY1.1
AT1G48360			zinc ion binding;nucleic acid ...		Potri.002G233800 [exp]	7.34	0.7583
AT1G74960		ATKAS2, KAS2, F...	ARABIDOPSIS BETA-KETOACYL-ACP ...		Potri.018G062900 [exp]	14.86	0.7452
AT1G22730			MA3 domain-containing protein ...		Potri.005G199200 [exp]	15.32	0.7761
AT1G54920			unknown protein		Potri.005G034100 [exp]	21.00	0.6743
AT2G38080		ATLMCO4, IRX12,...	LACCASE 4, IRREGULAR XYLEM 12,...		Potri.008G064000 [exp]	27.20	0.7527	LAC2.1,LAC2

Compare expression of checked genes

Potri.001G205500 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.