Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ADR1.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G33300 902 / 0 ADR1-L1 ADR1-like 1 (.1.2) AT5G04720 857 / 0 PHX21, ADR1-L2 PHOENIX 21, ADR1-like 2 (.1) AT1G33560 758 / 0 ADR1 ACTIVATED DISEASE RESISTANCE 1, Disease resistance protein (CC-NBS-LRR class) family (.1) AT5G47280 673 / 0 ADR1-L3 ADR1-like 3 (.1) AT5G66910 360 / 1e-111 Disease resistance protein (CC-NBS-LRR class) family (.1) AT5G66900 353 / 2e-109 Disease resistance protein (CC-NBS-LRR class) family (.1) AT5G66890 245 / 4e-73 Leucine-rich repeat (LRR) family protein (.1) AT3G26470 119 / 4e-30 Powdery mildew resistance protein, RPW8 domain (.1) AT5G17680 126 / 2e-29 disease resistance protein (TIR-NBS-LRR class), putative (.1) AT5G38850 120 / 1e-27 Disease resistance protein (TIR-NBS-LRR class) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G035700 [exp] 1442 / 0 AT4G33300 889 / 0.0 ADR1-like 1 (.1.2) Potri.007G039100 [exp] 380 / 1e-119 AT5G66900 474 / 3e-156 Disease resistance protein (CC-NBS-LRR class) family (.1) Potri.007G039300 [exp] 379 / 5e-119 AT5G66900 540 / 0.0 Disease resistance protein (CC-NBS-LRR class) family (.1) Potri.007G038700 [exp] 363 / 7e-113 AT5G66900 481 / 3e-158 Disease resistance protein (CC-NBS-LRR class) family (.1) Potri.007G038900 [exp] 293 / 3e-91 AT5G66900 336 / 4e-108 Disease resistance protein (CC-NBS-LRR class) family (.1) Potri.007G039000 [exp] 257 / 6e-75 AT5G66900 343 / 2e-107 Disease resistance protein (CC-NBS-LRR class) family (.1) Potri.005G007001 [exp] 141 / 4e-34 AT3G14470 647 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.005G031101 [exp] 125 / 5e-29 AT5G17680 557 / 8e-178 disease resistance protein (TIR-NBS-LRR class), putative (.1) Potri.003G200800 [exp] 125 / 5e-29 AT3G14460 509 / 7e-157 LRR and NB-ARC domains-containing disease resistance protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021769 [exp] 757 / 0 AT4G33300 583 / 0.0 ADR1-like 1 (.1.2) Lus10032759 [exp] 690 / 0 AT1G33560 543 / 0.0 ACTIVATED DISEASE RESISTANCE 1, Disease resistance protein (CC-NBS-LRR class) family (.1) Lus10022464 [exp] 374 / 9e-117 AT5G66900 531 / 2e-177 Disease resistance protein (CC-NBS-LRR class) family (.1) Lus10007359 [exp] 322 / 6e-97 AT5G66900 473 / 3e-154 Disease resistance protein (CC-NBS-LRR class) family (.1) Lus10020779 [exp] 281 / 1e-82 AT5G66900 434 / 5e-141 Disease resistance protein (CC-NBS-LRR class) family (.1) Lus10016770 [exp] 145 / 1e-35 AT5G66920 837 / 0.0 SKU5 similar 17 (.1) Lus10034761 [exp] 126 / 2e-30 AT5G66900 197 / 1e-54 Disease resistance protein (CC-NBS-LRR class) family (.1) Lus10005218 [exp] 117 / 2e-26 AT3G14470 379 / 2e-113 NB-ARC domain-containing disease resistance protein (.1) Lus10039509 [exp] 114 / 1e-25 AT3G14460 613 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10002945 [exp] 109 / 3e-24 AT3G07040 580 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00931 [poplar] [flax] NB-ARC NB-ARC domain CL0023 [poplar] [flax] PF05659 [poplar] [flax] RPW8 Arabidopsis broad-spectrum mildew resistance protein RPW8
Representative CDS sequence Show only first row Show all	>Potri.002G129300.1 pacid=42778781 polypeptide=Potri.002G129300.1.p locus=Potri.002G129300 ID=Potri.002G129300.1.v4.1 annot-version=v4.1 ATGGTGGTCACAGACCTCTTTTTAGGGGAGATAGCCACCGAGCTCCTCAAACAGCTACTAGCAATATCAAAAAAAGCCAGCCTATGCAAATCAAGTGCAG AATCTTTAATGGCAGGCATAAACGAACTCATCCCTATGATTCAAGAAATCAAATTATCCGGTGTTGAACTCCCTTCGAACCGCCAATTCCAACTCGACCA TCTCTCTCGCACGCTCCATGAAGGCCTCGAGCTCTCCAAGAAAGTCCTCAAATCAAACCGCTGGAACGTCTACAAAAACCTCCAGTTAGCAAGAAAGATG GAAAAGATTGAAAAGAAAATATACATGTTTATCAATGGACCTTTACAGGTTCATTTATTAGCTGACGTGCATCACATGAGGTTTGAAACAACAGAGAGGT TTGATAAGTTGGAGTGGTCAGCCAAGAAGTTAGAGGAGAGTATAGGGAATTTGAAGATCGGGGTGGGAGGTGGTGGTGGTGGTGGCTGGATGGAGGAAGC GGTGAAGAGATTGGAGGACGAAGAGATGAAGTGGGAGGGTAGTTTTGGGAATAATTTTTATTCGGGGTTAGGTATTGAAGAAGGGAAGAGGAAGGTGAAA GAAATGGTCATCGAGAGTAAGAATTTAAATGTTGTTGGGATTTGTGGCATTGGTGGGTCTGGAAAAACTACTTTGGCTAATGAAATCTGTAGAGATGATC AAGTTAGATGTCACTTTGAGAACAGGATTTTTTTCTTGACAGTATCACAGTCTCCGAATGTGGAGAACCTGAGGGCAAAAATCTGGGGATTTATTACAGG GAATGATGGAATGGGTGGTATGGGCTATGATTTGGTCCCAAAATGGAATTTGCAATTTGAATGGAGAATCGTAGCCCCAATGTTGATTGTTCTTGATGAT GTGTGGTCGCTCCCGGTGCTTGATCAGCTCATTTTTAAAGTAGCTGGATGCAAAACTCTAGTGGTTTCTCGTTTCAAATTCCCGAAAGTTTGTAATGCTA CTTACAACGTAGAATTATTGAGGAGAGAAGAAGCAATCTCATTGTTCTGCCACTCTGCTTTTGGAAAGACATCTATTCCTCCTGCTGCTGATTCAAATTT GGTCAAGCAGATTGTCGATGAGTGTAAAGGCCTGCCCTTGGCTCTCAAAGTGATTGGAGCTTCGTTAAGGGACCAACCTGAAATGTACTGGGAAAGTGCG AGGAAGAGGCTGTCAAGAGGGGAGCCTATTTGCGAGTCTCATGAAAGCAAGTTGCTTGATAGGATGGCAATTAGTACCCAGTTCTTGTCTAAAAACGTCA GGGAATGTTTCTTGGATCTGGGATCCTTCCCCGAAGACAAGAAGATCCCTCTTGATGTTCTCATCAACATGTGGGTTGAGATTCATGATATCGACCCGGA AGAAGCATTTGCTATCCTTGTTGAGCTTTCGGATAAGAATCTTCTCACTCTGGTGAAGGATGCACGAGCTGGGGATTTGTATAGCAGTTACTATGAGATT TGTATTATGCAACATGATGTGTTGCGGGACCTTGCTATTCATTTGAGCAGTTGTGGAGACATAAATGAGCGCAAGCGATTACTTATGCCAAGAAGAGAAG CACAGCTTCCAAAAGAATGGGAGAGAAATGCGGACCGGCCATTCAATGCTCAAATTGTTTCGATCCATACAGGTGAAATGAAAGAAATGGATTGGTTCCG CATGGATTTTCCCAAGGCTGAAGTGCTCATCCTGAACTTCTCGGCAAATGACTTCTTCTTGCCTCCCTTCATCGATGACATGCCAAAGCTCAGGGCATTG GTCATGATAAATTACAGTACAAGCAATGCAACCATTGGCAACTTCTCCATTTTTTCAAGTTTGGCTAATTTGAGGAGCCTTTGGCTCGAGAAAGTATCCA TCGGTAGATTATCTGAATCTACTGTCCCCTTAAAAAATTTGCGAAAAATATCTCTAATCCTGTGCAAGATAAACAAGAGCCTTGATGAGTCTGTCATAGA CTTATCCCACATCTTCCCATCTCTCTCAGAGCTTACAATCGATCACTGTGAAGATTTAATCCAGTTGCCTTCCAGCATTTGTAGGATTCACTCGCTCCAG AGTCTGAGCATCACCAATTGCCACAACCTAGAGAAATTACCTCCCAATCTGGGCAACTTAAAATCTCTACAAATTCTAAGGTTGTATGCTTGTCCAACAC TGAAAATGCTTCCACCATGTGTATGTGACCTAATTTGGTTGAAGTTCTTAGACATCTCGCAATGTGTCAATCTGAAAGGTCTTCCTGAGTGGATTGGTAA GCTATCGAGGTTAGAGAAGATTGACATGAGAGAGTGCTCGCTAGTGAAGCTGCCAAATTCTGTTGCATCATTGGAGTCTCTGCGTAAAGTAATCTGCGAA GAAGATGTTTCTTGGTTGTGGAAGGAGATGAAGAAAGTGAATCTTGATGTCCAAGTTGCAGAAAAATGCTACAGTCTGGACTGGCTTGATGATTATTAA
AA sequence Show only first row Show all	>Potri.002G129300.1 pacid=42778781 polypeptide=Potri.002G129300.1.p locus=Potri.002G129300 ID=Potri.002G129300.1.v4.1 annot-version=v4.1 MVVTDLFLGEIATELLKQLLAISKKASLCKSSAESLMAGINELIPMIQEIKLSGVELPSNRQFQLDHLSRTLHEGLELSKKVLKSNRWNVYKNLQLARKM EKIEKKIYMFINGPLQVHLLADVHHMRFETTERFDKLEWSAKKLEESIGNLKIGVGGGGGGGWMEEAVKRLEDEEMKWEGSFGNNFYSGLGIEEGKRKVK EMVIESKNLNVVGICGIGGSGKTTLANEICRDDQVRCHFENRIFFLTVSQSPNVENLRAKIWGFITGNDGMGGMGYDLVPKWNLQFEWRIVAPMLIVLDD VWSLPVLDQLIFKVAGCKTLVVSRFKFPKVCNATYNVELLRREEAISLFCHSAFGKTSIPPAADSNLVKQIVDECKGLPLALKVIGASLRDQPEMYWESA RKRLSRGEPICESHESKLLDRMAISTQFLSKNVRECFLDLGSFPEDKKIPLDVLINMWVEIHDIDPEEAFAILVELSDKNLLTLVKDARAGDLYSSYYEI CIMQHDVLRDLAIHLSSCGDINERKRLLMPRREAQLPKEWERNADRPFNAQIVSIHTGEMKEMDWFRMDFPKAEVLILNFSANDFFLPPFIDDMPKLRAL VMINYSTSNATIGNFSIFSSLANLRSLWLEKVSIGRLSESTVPLKNLRKISLILCKINKSLDESVIDLSHIFPSLSELTIDHCEDLIQLPSSICRIHSLQ SLSITNCHNLEKLPPNLGNLKSLQILRLYACPTLKMLPPCVCDLIWLKFLDISQCVNLKGLPEWIGKLSRLEKIDMRECSLVKLPNSVASLESLRKVICE EDVSWLWKEMKKVNLDVQVAEKCYSLDWLDDY

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G33300		ADR1-L1	ADR1-like 1 (.1.2)		Potri.002G129300 [exp]	0	1	ADR1.1
AT1G17020		ATSRG1, SRG1	senescence-related gene 1 (.1)		Potri.001G355100 [exp]	2.44	0.7460
AT5G52430			hydroxyproline-rich glycoprote...		Potri.001G102200 [exp]	2.44	0.7652
AT1G14780			MAC/Perforin domain-containing...		Potri.002G234700 [exp]	3.46	0.7441
AT3G48530		KING1	SNF1-related protein kinase re...		Potri.015G094700 [exp]	5.47	0.7414
AT3G14470			NB-ARC domain-containing disea...		Potri.004G169800 [exp]	7.21	0.7548
AT1G11950			Transcription factor jumonji (...		Potri.004G006200 [exp]	8.48	0.7053
AT1G22930			T-complex protein 11 (.1.2)		Potri.004G217800 [exp]	12.48	0.6979
AT3G48530		KING1	SNF1-related protein kinase re...		Potri.012G097000 [exp]	12.72	0.7267
AT5G36930			Disease resistance protein (TI...		Potri.010G231200 [exp]	15.19	0.6987
AT1G70950			TPX2 (targeting protein for Xk...		Potri.010G113000 [exp]	16.73	0.6940

Compare expression of checked genes

Potri.002G129300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.