Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	KUP10.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G35060 1155 / 0 KUP11 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) AT1G31120 1138 / 0 KUP10 K+ uptake permease 10, K+ uptake permease 10 (.1) AT4G19960 994 / 0 KT9, HAK9, ATKUP9 K+ uptake permease 9, K+ uptake permease 9 (.1), K+ uptake permease 9 (.2) AT3G02050 622 / 0 ATKT4, ATKUP3, KUP3 K+ uptake transporter 3, ARABIDOPSIS THALIANA POTASSIUM TRANSPORTER 4, K+ uptake transporter 3 (.1) AT1G60160 619 / 0 Potassium transporter family protein (.1) AT2G40540 612 / 0 ATKUP2, ATKT2, TRK2, SHY3, KT2 potassium transporter 2 (.1.2) AT5G14880 610 / 0 Potassium transporter family protein (.1) AT4G13420 606 / 0 HAK5, ATHAK5 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) AT1G70300 602 / 0 KUP6 K+ uptake permease 6, K+ uptake permease 6 (.1) AT4G33530 584 / 0 KUP5 K+ uptake permease 5, K+ uptake permease 5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G123800 [exp] 1378 / 0 AT2G35060 1149 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) Potri.001G123700 [exp] 1123 / 0 AT2G35060 1047 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) Potri.003G109800 [exp] 1035 / 0 AT2G35060 985 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) Potri.014G144900 [exp] 681 / 0 AT3G02050 1175 / 0.0 K+ uptake transporter 3, ARABIDOPSIS THALIANA POTASSIUM TRANSPORTER 4, K+ uptake transporter 3 (.1) Potri.002G237500 [exp] 661 / 0 AT3G02050 1179 / 0.0 K+ uptake transporter 3, ARABIDOPSIS THALIANA POTASSIUM TRANSPORTER 4, K+ uptake transporter 3 (.1) Potri.010G094400 [exp] 626 / 0 AT1G60160 1209 / 0.0 Potassium transporter family protein (.1) Potri.001G045200 [exp] 617 / 0 AT4G13420 978 / 0.0 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) Potri.010G094300 [exp] 614 / 0 AT1G70300 1228 / 0.0 K+ uptake permease 6, K+ uptake permease 6 (.1) Potri.001G069650 [exp] 611 / 0 AT4G13420 951 / 0.0 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036221 [exp] 1170 / 0 AT2G35060 1173 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) Lus10038361 [exp] 1159 / 0 AT2G35060 1164 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) Lus10018324 [exp] 1150 / 0 AT2G35060 1212 / 0.0 K+ uptake permease 11, K+ uptake permease 11 (.1), K+ uptake permease 11 (.2) Lus10030857 [exp] 622 / 0 AT1G70300 1249 / 0.0 K+ uptake permease 6, K+ uptake permease 6 (.1) Lus10030632 [exp] 612 / 0 AT1G70300 1238 / 0.0 K+ uptake permease 6, K+ uptake permease 6 (.1) Lus10012993 [exp] 608 / 0 AT1G60160 1237 / 0.0 Potassium transporter family protein (.1) Lus10030539 [exp] 602 / 0 AT2G40540 1245 / 0.0 potassium transporter 2 (.1.2) Lus10027004 [exp] 593 / 0 AT4G13420 828 / 0.0 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) Lus10025493 [exp] 584 / 0 AT4G13420 826 / 0.0 high affinity K+ transporter 5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, high affinity K+ transporter 5 (.1) Lus10036160 [exp] 576 / 0 AT5G09400 1204 / 0.0 K+ uptake permease 7, K+ uptake permease 7 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0062 [poplar] [flax] APC PF02705 [poplar] [flax] K_trans K+ potassium transporter
Representative CDS sequence Show only first row Show all	>Potri.003G109700.1 pacid=42785544 polypeptide=Potri.003G109700.1.p locus=Potri.003G109700 ID=Potri.003G109700.1.v4.1 annot-version=v4.1 ATGGAATTGAGTATGGAAATGACTCCAAGAGTAGAGGTTGAGGAAGACAGCGACAACAATAAAGGAAGTATGTGGGATTTGGATCAGAAACTTGATCAGC CCATGGATGAGGAAGCTGGAAGGCTCAGAAATATGTACAGAGAAAAGAAGTTCTCAGCCCTTTTGCTTCTGCGGCTTGCCTTCCAGAGTCTTGGAGTGGT TTATGGAGACTTGGGCACCTCTCCCTTGTACGTGTTCTACAATACGTTCCCTCGTGGAATCAATGATTCTGAGGATGTGATTGGAGCTCTTTCATTGATC ATATACTCGCTCACTCTTATCCCACTCCTTAAGTATGTCTTCATCGTGTGTAAAGCAAATGACAATGGCCAAGGTGGAACATTTGCCCTCTATTCGTTAC TTTGTCGGCATGCTAATGTTAGAACTATTCCAAATCAACATCGGACAGATGAAGAGCTGACAACATATAGCCGTTCCACTTTCAATGAGCAATCATTTGC TGCTACAACTAAGCGATGGTTGGAGAGAAATGCATTCAGAAGGAATGCACTTCTTATTCTTGTCCTTGTTGGCACTTGTATGTTGATTGGTGATGGGATT CTCACTCCAGCAATATCTGTTCTTTCAGCTTCTGGCGGGATCAAGGTAAACCACCCCAAACTGAGTAGCGATGTAGTCATAGTTGTTGCAGTTGTAATAT TGGTGGGTTTGTTTAGCATGCAACACTATGGGACAGATAAAGTCAGCTGGCTCTTTGCCCCAATTGTGCTGCTTTGGTTTCTCTTAATTGGGGGTATCGG CGTGTTCAACATCTGGAAATATGATACTGGTGTTCTGAAAGCTTTTTCACCTGTACATATTTATCGGTATTTTAGAAGGGGAGGTAGAGATAGCTGGACT TCCCTGGGAGGGATTATGCTCAGTATAACTGGTACGGAGGCACTTTTTGCTGATCTAGGCCATTTTCCAGTTTCAGCTGTACAGATTGCTTTTACTGTAG TTGTTTTCCCTTGTCTTCTTTTAGCATATTCTGGACAAGCCGCTTATCTTATGCAAAACAAGGAACATGTGGTTGATGCATTCTATCGTTCTATTCCAGA TAGAATATATTGGCCAGTGTTCATTGTCGCAACTGCAGCTGCTGTAGTTGCGAGTCAGGCTACCATAACTGCAACTTTTTCAATAATCAAGCAGGCTCTT GCACTTGGATGTTTTCCAAGAGTCAAAGTTGTACATACATCAAAAAAGTTCCTAGGCCAGATATATATTCCCGATATAAATTGGATCCTTATGATCCTTT GCATCTGCGTCACTGCTGGTTTCAAGAACCAAAGTCAAATCGGTAATGCTTATGGGACAGCTGTTGTGATAGTCATGCTGGTAACCACTTTGCTTATGAT TCTAATCATGTTATTGGTGTGGCGCTGCCATTGGATTCTTGTCTTGCTGTTCACTGGCTTATCACTGGTTGTGGAATGCACCTACTTCTCTGCTGTACTC TTCAAGATTGGCCAAGGTGGGTGGGTGCCGCTTGTGATTGCAGCTGCCTTTCTTGTCATCATGTATGTCTGGCATTATGGTACATTGAAACGTTACGAGT TTGAGATGCACAGTAAGGTTTCTATGGCATGGATTGTAGGGCTTGGCCCCAGTTTAGGACTGGTGAGAGTCCCAGGGATTGGGCTTGTGTACACCGAGCT GGCAAGAGGGGTTCCCCGCATCTTTTCTCACTTCATTACAAATCTACCTGCCATACATTCTGTTGTTGTTTTTGTCTGTGTGAAGTACCTCCCTGTCTAC ACGGTCCCTGAAGAAGAGAGATTCCTTGTCAAGCGGATTGGACCAAAGAATTTTCACATGTTTCGTTGTGTTGCAAGGTATGGATATAAAGACCTTCACA AGAAGGATGAAGATTTTGAGAAAAAACTCTTTGATAGCCTATTCTTGTTTGTCCGGCTCGAGACTATGATGGAAGGATGTTCAGATTCAGACGACTATAG TTTATATGGGCCGCAAACTGAGCGGTCGAGAGAAGCCCTTTTAAATGATAATGTAAACACTGCTTCCTCGCTTGCTGATCCCACTATTTCATCCATCGAC TCGATCGTGCAGATCAAGTCTCCATCACATGCAAATTTTACCAGTAGGTCGTCCGACCGAACTAGCAGCCAGGCGGAGGTTGACCAGACAGAATTTTTGA ATAATTGTAGGGATGCTGGGGTGGTGCACATAATGGGGAATACGGTGGTGAGAGCTAGGAGGGATTCAAGATTCTACAAGAAGATAGCTGTTGATTATAT ATATGCATTTCTTAGAAAAATTTGTAGGGAAAACAGTGTGATTTTTAATGTTCCTCATGAGAGTCTCTTGAACGTCGGACAGATATTCTATGTATAA
AA sequence Show only first row Show all	>Potri.003G109700.1 pacid=42785544 polypeptide=Potri.003G109700.1.p locus=Potri.003G109700 ID=Potri.003G109700.1.v4.1 annot-version=v4.1 MELSMEMTPRVEVEEDSDNNKGSMWDLDQKLDQPMDEEAGRLRNMYREKKFSALLLLRLAFQSLGVVYGDLGTSPLYVFYNTFPRGINDSEDVIGALSLI IYSLTLIPLLKYVFIVCKANDNGQGGTFALYSLLCRHANVRTIPNQHRTDEELTTYSRSTFNEQSFAATTKRWLERNAFRRNALLILVLVGTCMLIGDGI LTPAISVLSASGGIKVNHPKLSSDVVIVVAVVILVGLFSMQHYGTDKVSWLFAPIVLLWFLLIGGIGVFNIWKYDTGVLKAFSPVHIYRYFRRGGRDSWT SLGGIMLSITGTEALFADLGHFPVSAVQIAFTVVVFPCLLLAYSGQAAYLMQNKEHVVDAFYRSIPDRIYWPVFIVATAAAVVASQATITATFSIIKQAL ALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCICVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMILIMLLVWRCHWILVLLFTGLSLVVECTYFSAVL FKIGQGGWVPLVIAAAFLVIMYVWHYGTLKRYEFEMHSKVSMAWIVGLGPSLGLVRVPGIGLVYTELARGVPRIFSHFITNLPAIHSVVVFVCVKYLPVY TVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDEDFEKKLFDSLFLFVRLETMMEGCSDSDDYSLYGPQTERSREALLNDNVNTASSLADPTISSID SIVQIKSPSHANFTSRSSDRTSSQAEVDQTEFLNNCRDAGVVHIMGNTVVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G35060		KUP11	K+ uptake permease 11, K+ upta...		Potri.003G109700 [exp]	0	1	KUP10.2
AT5G33280			Voltage-gated chloride channel...		Potri.018G124100 [exp]	16.49	0.7036
AT3G49180		RID3	ROOT INITIATION DEFECTIVE 3, T...		Potri.001G384200 [exp]	36.87	0.6601
AT3G07820			Pectin lyase-like superfamily ...		Potri.019G067166 [exp]	39.06	0.6521
AT3G07820			Pectin lyase-like superfamily ...		Potri.019G067200 [exp]	56.14	0.6375
AT5G15240			Transmembrane amino acid trans...		Potri.017G083500 [exp]	144.98	0.6098
AT5G01210			HXXXD-type acyl-transferase fa...		Potri.006G097500 [exp]	159.27	0.6057
AT2G36960	MYB	TKI1	TSL-kinase interacting protein...		Potri.006G125400 [exp]	168.33	0.5607	Pt-TKI1.2
AT4G31980			unknown protein		Potri.003G206901 [exp]	260.84	0.4861

Compare expression of checked genes

Potri.003G109700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.