Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G27220 230 / 2e-61 NB-ARC domain-containing disease resistance protein (.1) AT4G27190 227 / 2e-60 NB-ARC domain-containing disease resistance protein (.1) AT4G26090 167 / 3e-41 RPS2 RESISTANT TO P. SYRINGAE 2, NB-ARC domain-containing disease resistance protein (.1) AT1G12280 165 / 8e-41 LRR and NB-ARC domains-containing disease resistance protein (.1) AT1G12220 162 / 7e-40 RPS5 RESISTANT TO P. SYRINGAE 5, Disease resistance protein (CC-NBS-LRR class) family (.1), Disease resistance protein (CC-NBS-LRR class) family (.2) AT1G61190 160 / 4e-39 LRR and NB-ARC domains-containing disease resistance protein (.1) AT5G63020 157 / 3e-38 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G61180 155 / 1e-37 LRR and NB-ARC domains-containing disease resistance protein (.1.2) AT1G61310 150 / 3e-36 LRR and NB-ARC domains-containing disease resistance protein (.1) AT1G51480 149 / 8e-36 Disease resistance protein (CC-NBS-LRR class) family (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G062130 [exp] 4766 / 0 AT4G27220 256 / 5e-70 NB-ARC domain-containing disease resistance protein (.1) Potri.013G027300 [exp] 2625 / 0 AT4G27190 244 / 8e-66 NB-ARC domain-containing disease resistance protein (.1) Potri.019G036875 [exp] 1682 / 0 AT4G27190 178 / 9e-45 NB-ARC domain-containing disease resistance protein (.1) Potri.013G015700 [exp] 1164 / 0 AT4G27190 257 / 2e-70 NB-ARC domain-containing disease resistance protein (.1) Potri.005G042900 [exp] 1159 / 0 AT4G27190 240 / 7e-65 NB-ARC domain-containing disease resistance protein (.1) Potri.005G041101 [exp] 1150 / 0 AT4G27220 229 / 2e-61 NB-ARC domain-containing disease resistance protein (.1) Potri.005G042400 [exp] 1149 / 0 AT4G27220 234 / 4e-63 NB-ARC domain-containing disease resistance protein (.1) Potri.013G015900 [exp] 1110 / 0 AT4G27190 268 / 5e-74 NB-ARC domain-containing disease resistance protein (.1) Potri.001G422800 [exp] 452 / 2e-129 AT4G27190 282 / 2e-78 NB-ARC domain-containing disease resistance protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039540 [exp] 114 / 1e-24 AT3G14470 727 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Lus10039509 [exp] 108 / 5e-23 AT3G14460 613 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10024173 [exp] 102 / 3e-21 AT3G14460 681 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10007261 [exp] 96 / 3e-19 AT3G14460 654 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10026132 [exp] 87 / 3e-16 AT3G14460 594 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10041243 [exp] 85 / 6e-16 AT3G07040 526 / 1e-172 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10022351 [exp] 84 / 2e-15 AT3G14470 369 / 1e-108 NB-ARC domain-containing disease resistance protein (.1) Lus10018937 [exp] 83 / 2e-15 AT3G07040 587 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10020016 [exp] 81 / 1e-14 AT3G07040 563 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10026109 [exp] 79 / 6e-14 AT3G14470 598 / 0.0 NB-ARC domain-containing disease resistance protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00931 [poplar] [flax] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Potri.005G061860.1 pacid=42802554 polypeptide=Potri.005G061860.1.p locus=Potri.005G061860 ID=Potri.005G061860.1.v4.1 annot-version=v4.1 ATGGTTCTGGAAAGCATTATTTCCACCATCGGCGTTGTTTCCCAGCACACCGTTGTTCCAATTGCACGTGAGATCAATCATTGTTTGAAATACAATCACA ACTTTGAAAATCTGAAGAGGGAAGTCAAGAAGTTGAAAAGTGCCCAGCTGAGGGTGCAGCATTTAGTTGACGATGCCAGAAACAATGGGGAAGCAATTCT TGAGGATGTTATAAAGTGGCTATCTCTTGTGGAAGAAGCTTCAGAAAAAGTGGAAAGGGAGATTTTGGAAGATGAAGATAGAGCGAGAAAGAAGTGCTTC ATCGGATTGTGTCCGGATCTCAAGGCACGATACCAGTGTAGCAAGAAAGCAAAGGCGGAAACACGCTTTGTTGCCAGCCTCCTGGATGAAAGAGATGGTT TCAGCACAGTTTCCCATCGAGCTGCTCCAAAAGGGATGGAAGCTATATCTATCAGAAGTTATGACGCCATGCCATCAAGAACACCCGTTTTGAAGGAAAT TATGAATGCCTTAACAACTGCTGATGTGAACATGGTTGGGGTGTATGGAATGGGTGGTATGGGGAAGACAACGCTGGTAAAAGAGGCTGCTAGACAAGCC ATTCAGGAGAAATTATTTAACCAGGTAGTGTTTGCCACTATAACCCAAACCCAAGACATCAAGAAAATTCAAGGGCAGATTGCAGACCAGCTTTCTCTAA AATTTGATGAGGAAAGTGAATGTGGAAGAGCTGGTCGATTGCGCCAGAGGTTGAAACAAGAGCAGAAAATTCTTATTATTCTAGACGATTTGTGGAAGAG TCTTGATTTAGAAGCAGTTGGGATTCCACTCAAGGATGAACACGAAGGATGCAAGATGCTGGTGACATCGAGGGAATTTGATGTTTTATCTTGTGGAATG GATATTCAAAAGAACTTTCCCATCAATGCTTTATCTGAAGAAGAAACGTGGGAGTTGTTCAAAAAGATGGCAGGAGATCACGTTGAACATCCAGATTTGC AATCCTTGGCAATTGAGGTGGCCAAAATGTGTGCAGGTTTACCGGTGGCCATTGTAACTGTTGCAAGAGCTCTGAAGAACAAGAACTTGTCCCAGTGGAA GAATGCATTACGGGAACTAAAGAGACCATCTCCAAGAAACTTCGCAGGAGTGCAGGAAGATGTTTATGCGGCTATAGAACTAAGTTATAATCATCTTGAA AGTAAGGAGTTGAAATCAACTTTTCTTCTTTGTAGTCGAATGGGTTATAATGCATCCACTCGCGACTTGTTGAAATATGGTATGGGTTTGGGCTTGTTTT CTGGCTTTGTTACAGTTGAAGAAGCACAAGACAGAGTGCATTCGTTGGTTCATAAACTCAAGGCCTCTGGATTGTTGCTAGAAAATCATAGCGATTGGCA ATTTTCTATGCATGATGCTGTGCGTGATGTTGCTATATCAATTGCTTTTAGAGACTGCCACGTATTTGTTGGGGGTGATGAGGTTGAACCAAAATGGTCT GCTAAGAATATGTTAAAGAAGTATAAAGAAATTTGGTTAAGTTCTAATATCGAGCTTCTTAGAGAGATGGAGTACCCACAACTTAAATTTTTACATGTAA GGAGTGAGGATCCTTCTCTAGAAATAAGTAGCAACATATGTAGAGGAATGCACAAACTGAAAGTCTTAGTATTGACTAACATTTCTCTTGTGTCTTTGCC TTCACCTCTTCATTTCCTAAAAAACCTTCGAACTTTGTGTCTTCATCAATCTTCATTGGGAGAGATAGCTGACATTGGGGAGCTGAAGAAATTGGAAATT CTCAGCTTTGCCAAATCTAATATTAAGCATTTGCCAATTCAAATAGGGCAGTTGACTAAGCTGAGAATGTTGGATTTGAGTGATTGTTTTGAACTTGACG TAATTCCACCAAATATCTTCTCAAACTTGTCCATGCTAGAAGAATTGTGTATGGGAAACAGCTTCCATCATTGGGCTACTGAAGGGGAGGACAATGCCAG TCTTGTTGAATTGGATCATTTGCCTCACTTGACAAATGTGGACATACATGTTCTAGATTCTCATGTTATGTCAAAAGGCATGCTCTCTAAAAGATTAGAA AGATTCAGAATATTTATTGGAGATGTCTGGGATTGGGATGGTGTTTATCAGAGCTTGAGAACATTGAAGCTCAGGCTCAACACATGCGCCAGTCATTTGG AGCATGGTGTTCTAATGTTGTTGAAGAGAACTCAAGATTTGTATTTACTTGAACTAAAGGGTGTTAATAATGTCGTCTCTGAACTAGACACGGAAGGATT TCTACAACTGCGGCACCTCCATCTCCACAATAGTTCTGATACTCAATATATTATTAACACTAGCAGCGAGGTTCCTTCTCATGTCTTCCCTGTGTTGGAG TCTTTGTTTCTCTACAATTTGGTATCCTTGGAGAAACTTTGCCATGGCATTCTCACAGCAGAGTCTTTCAGGAAACTAACAATCATAGAAGTGGGGAACT GTGTTAAATTGAAGCATCTCTTCCCATTCTCCATTGCACGAGGACTTTCGCAACTTCAAACCATCAATATTTCGTTTTGCCTAACCATGGAAGAGATTGT TGCTGAGGAAGGTGATGAATTTGAAGACTCTTGTACAGAAATTGATGTGATGGAGTTCAATCAATTGAGCTCACTATCGCTTCGGTGTTTGCCGCATCTC AAAAACTTTTGCTCCAGAGAGAAGACATCTCGACTCTGTCAAGCTCAACTGAATCCAGTGGCAACTAGCGTGGGATTGCAATCTAAAGAAATTTCAGAGG ATGAGCCGAGAAATCCTCTCCAGCTTTTCTGTGAAAAGATTCTTATCCCGAAACTGAAGAAGTTGGAATTGGTCTCTATCAACGTTGAAAAGATATGGCA TGGCCAGCTTCATCGGGAAAATACATTTCCTGTTCAAAATTTACAGACATTATATGTGGATGATTGCCACAGCCTGAAATATCTGTTTTCTCCTTCCATG GTTAAAAGTCTTGTGCAACTCAAGTATCTTACTGTACGTAATTGCAAGTCCATGGAAGAGATAATATCTGTAGAAGGAGTGGAAGAAGGAGAAATGATGA GCGAGATGTGCTTTGATAAACTGGAAGATGTTGAGCTCTCTGATCTTCCAAGACTCACATGGTTCTGTGCTGGCTCGCTGATCAAGTGTAAAGTGTTGAA ACAACTGTACATTTGTTATTGCCCTGAATTTAAGACATTCATCTCCTGTCCCGATAGCGCGAACATGACAGTTGACATTGAACCTGGAGAATTGCATTCA AGGGAGAGTGACCACAATGCCGTTCAGCCTCTCTTTGATGAAAAGGTTGCATTCCCTAGCCTAGCTGAAATCAAAATTTCCCACATAGAGAACTTGGAAA AGATGTGGCACAACCAACTAGCTGAAGATTCCTTTTGTCAACTACAATCAGTAACAATTTCTAGCTGTAAAAGGCTAGTGAGGGTTTTCCCATCAATTTT GCTAGAAACATTCCGGATGGTAGAGATGTTGGATATCCGTCATTGTCCTTTCTTAGAAGAGATCTTTGACCTTCAAGAAACTGGTGCATCTGGTTCCCTT CAGTTAAGAGACTTGTCCTTGATTGGACTAGGCAAACTGAAGCATATATGGAATAAAGATCCTCAAGGAATACTCAGCTTCCAAAATCTACATGCATTAA AGGTTTCTGATTGTAATGTATTGAAGAATCTGTTTCCCTTCTCTATAGCTAGAGAACTTGTGCAACTCGAAAAACTCAAGATAGAGCATTGTGGGAAACT GGAGGAAATTATTGTGAAGGTGGACAATGGTGAAGCAGCCCATTGTTTTGTGTTTCCGCTGCTAACCTCATTGAAACTTCAAGAATTACCAGAATTCAGG AACTTATATCCAGGGAAACATACTTGGAAATCTCCCATGTTAAAAAGGTTGGCGGTGTCTGATTGCTGCAATGTAGCATTATTCGGCTCCAAATTTCTTA AATCTCAAGAAACTCAAGGGGAAGTCCAACTTGGTATCCCGGCTCAACAACCTCTCTTCTTCGTCGAAAAGGTGATCTCCAACCTGGAGGAATTGTCATT AGGTGGCAAGAACACAACTGCTTCAATCATTTGGCATCACCAACTTCCAATAGAGTGCTATTCCTCATTGAAAGTTCTAAAGTTACACGATTTTGGTGTT AAATCAGATCCTATCTCATTCGGTTTCCTGCAAAGATTACGGAATCTTGAAACACTATCCGTGACACATAGTTCTTTCAAAAAGCTATTCCTGTACAAAG GGCATAGTTCATTCAAAAAGCTACCATCGATCAGAGAAGTTGTTGGTGAAGAGAGACGTGCACTTGCACGATTAAAAAATTTAACAATACATGCAGTTCA TGATATAAAACATATATGGAAGCAAGACCACCTGCTAGCTCCCATTCTTCACAATCTTAAGACTCTCAAAGTAGAGGATTGTCACAGTTTGGTCAGTTTA GCACCATCTTATGTGTGTTTTCAAAATTTAACAACTCTGGATATACAGTCGTGCCTTGGATTATTGAACTTGTTTACATCATCAACGGCTAAAAGTCTTG TGCAACTTGTTAAGTTGACCATAGCTCATTGCAAAAAAGTGACAGTAGTGGTGGCAAGACAGGGAGGAGATGAAGCAGATGATGAGATCATTTTCAGCAA ACTAGAATATTTGGAACTTCTAGATTTACAGAATCTCACAAGCTTCTGCTTTGGAAATTATGCCTTCAGATTTCCATCATTGAAAGAAATGGTTGTCGAA GAATGTCCTAATATGAGAATTTTCTCTCCAGGAGTGTTAAGCACGCCAAAGCTGCTGGGAGTACACTGGAAAAAGTATTCTAAGAATAGAGTGCATTGGC ATGGTAATCTTGATATTACCATACAACACTTATACACAGAAATGGTTGGATTTGATGGTGTAAAGAGGCTAAAGGTATCTGACTTTCCTCAATTGAAAGA GAGATGGCAATGCCAACTTCCTTTCAACTTCTTCAGAAATTTAACAAACCTCACGGTGGATGAATACTGTTATTCGCTCGATGCTTTACCTTCCACTCTG CTACAGTTTATGAACGATTTGCAGGAACTGCAAGTGAGAAACTGTGATTTACTAGAAGGGGTATTTGATTTGAAAGGTATTAGTCCAGAGGAAGGGAGGG TTTGGTTACCCCTTTTATATGAATTGAACTTGATTGGTTTATCAAGGTTGAGACATATATGTAACACAGATCCTCAAGGAATTCTGGAATTCAGAAACCT TAATTTTCTAGAAGTTCATGACTGTAGCAGCTTGAGAAATATATTTACACCATCGATGGCATTGAGCCTTGTGCATCTCCAGAAAATTGTAATAAGAAAC TGTGACAAGATGGAAGAAATCATCACCAAGGAGAGAGCAGGGGAAGAAGAAGCAATGGATAAAATCATATTTCCTGTACTAAAAGTGATCATTCTCGAGT CTTTACCTGAGTTAAGCAATATCTACTCAGGAAGTGGTGTTCTGAATCTTACATCGTTAGAAGAGATTTGCATAGATGATTGTCCAAATATGAAGATCTT CATCTCCTCCCTTATAGAGGAACCGGAGCCTAATTCAGTTGATAAAGGAAAAGAGCAGAGGCAAGGTCAGGGAGACAATTATAATTTCACTGCACTTCTC ACCTATAAGGTTGCATTTCCAGAATTGAAGAAATTGAGAGTGGATTGGAATGCTATCATGGAGGTGACACAGTGTGGCCAATTTCGGACCGAGTTCTTCT GCCGACTAAAGGTTCTTGAACTCGTCCACTTTCCCATTGATTGTGTTGATTTTCCATCCTGGTTCCTTCAGAGATTCAACATTTTAGAGAGCCTTGTTGT GTGTGATGCTTCTTTCGAAGAAATAGTCCGGCTTGAAGAGATGAGTAGCAGGCCGAACCAGGTCTTTGCTCAGCTAAGAGTATTGGAGCTGTCTAAGCTG CCGGAACTCATGCATCTGTCGAAAGAAAGCTCGCAGGCATGTCAAATTTTCCAAAATCTAGAAATTCTTCGAGTATCTGAATGTGGCACACTGAAAACTT TAATTCCAATGTCGGTATCTTTCCGATGCCTGATGACTTTGGAAGTCTCAAAATGTAATGGGCTAGCAAGTTTGATGTCTTCCTCAACAGCTAAAAATCT TGTGCAACTCACTAGCATGAGTGTAGTCGAATGTGAAACGATTGAAGTAGTAGTTGCAGACGACGAAAATGAAGCAGAAAATGAGATCGTTTTTCATAAG TTGGAAAATTTGGCATTTCACTGCTTACCAAGCCTCACAAGCTTCTACATGCAAAACTGTGCATTGATGTTTCCTTCATTGGAGAGAGTATTCATAGATC AGTGCCCGAAGATGGAATTGTTTTCCCGGGGAGTCATAAACACCCCAAAGCTAGAGAGAGTACAATTAACAGAAGGAGACAGCACAGGATTCTGGAAGGA TGACCTTAATTTGACTATACATAACTTGTTCGTGAAGAAGTCCAAATTGCCAAGCTCATCTAGGCAGCCCAGCTTAGCCCGTGAGACAACTGCAGCACAT AAAAATCAAATGTATGCTGTCTCTGAAGGACCAGCTTCTGAGAATTTGCACGTGAATGAGAATCCAGATGCTGGAAAAGATTCCCATCCTGTCATCGAAA CAAGCACTAATCTTGTTATCAAAGAACAGGCCATGAGAAATGGATTGATGAAACCAGGCCCTCAAGTGACCTCAATATACCAAGATTCCCAGGCAACTTT GAATGATAAGGAGGATCGTGAACAAGGTCAGAGTCCCCTAGCTCCCATTGACATTGAAGCTCCCATCTCTCAGCAAGTTCAAAATGATTCTCAAGCAACT GACGAGAAGGAATTCCCGCAAGACCAATTTATGACTGCTTCTTCAAGTCAGCAAAAAAGCATTGTTCTTGTATCTCCTCCCAGTGCTGGAGAACAATCTC TTGCATCAACTTCTGCATCTTCAACCAATGAAACCTCCACTCAGAAGCTCGCATCTCACACTTCCTCGAGACGAACTTCAGAAACAATTACAGAAATCGA GTCTCTATTTGCTACCATGGAACAATTGGTCAGACCATGTCCTGTGTCTTCTTCGCAGCCTGAATCAAGTGCAAATACACATACTGAATCTTATGAGTCT GATGTTGGGAGCCCCGAGAGTCATGTCTACTCTATGGGTTTGATAAAGAAAATCTTATTGAAACCCCTGACGGAAGTAGCAAGATCACCTGATGGCCTCC TGTTGCTAGCTACAATGAAGAATCTAAAGAAAAGTGATCTCCTAAATTCTCAGCAGTTAGAAATCATTCAAGCTTACATTGACAATTTTCATAGTCTAGT GTCCAACTACCCATTGTACGAGCACCAAATTGATAGGACAAGTGCACTGAAATGTTCCATTGAAGATAAGAAAAAAGGAATTTCTGACCTCAAGAACCAT TATGGAGATCTTATCAACAATGCAAGCAGTCTTGCTGCAGAGAGGGAAGCATTGAAAAAGAGACTTGATGAGATTGCAGAAGAAGAAATTCACATCCGAG AAGATGCAGACGATCTCCGTACACAGCTGATCAGTTGGAAAGCTGAACTAGAAACGCACATGAAAGCTCTTCCAGAAGCTTTGAGACAACAAAATGAAGC TGAGAATAGAACCAACAATTCCAATGATTATTGGGGTAAGATTCGAAGCTTATTTGCTTGA
AA sequence Show only first row Show all	>Potri.005G061860.1 pacid=42802554 polypeptide=Potri.005G061860.1.p locus=Potri.005G061860 ID=Potri.005G061860.1.v4.1 annot-version=v4.1 MVLESIISTIGVVSQHTVVPIAREINHCLKYNHNFENLKREVKKLKSAQLRVQHLVDDARNNGEAILEDVIKWLSLVEEASEKVEREILEDEDRARKKCF IGLCPDLKARYQCSKKAKAETRFVASLLDERDGFSTVSHRAAPKGMEAISIRSYDAMPSRTPVLKEIMNALTTADVNMVGVYGMGGMGKTTLVKEAARQA IQEKLFNQVVFATITQTQDIKKIQGQIADQLSLKFDEESECGRAGRLRQRLKQEQKILIILDDLWKSLDLEAVGIPLKDEHEGCKMLVTSREFDVLSCGM DIQKNFPINALSEEETWELFKKMAGDHVEHPDLQSLAIEVAKMCAGLPVAIVTVARALKNKNLSQWKNALRELKRPSPRNFAGVQEDVYAAIELSYNHLE SKELKSTFLLCSRMGYNASTRDLLKYGMGLGLFSGFVTVEEAQDRVHSLVHKLKASGLLLENHSDWQFSMHDAVRDVAISIAFRDCHVFVGGDEVEPKWS AKNMLKKYKEIWLSSNIELLREMEYPQLKFLHVRSEDPSLEISSNICRGMHKLKVLVLTNISLVSLPSPLHFLKNLRTLCLHQSSLGEIADIGELKKLEI LSFAKSNIKHLPIQIGQLTKLRMLDLSDCFELDVIPPNIFSNLSMLEELCMGNSFHHWATEGEDNASLVELDHLPHLTNVDIHVLDSHVMSKGMLSKRLE RFRIFIGDVWDWDGVYQSLRTLKLRLNTCASHLEHGVLMLLKRTQDLYLLELKGVNNVVSELDTEGFLQLRHLHLHNSSDTQYIINTSSEVPSHVFPVLE SLFLYNLVSLEKLCHGILTAESFRKLTIIEVGNCVKLKHLFPFSIARGLSQLQTINISFCLTMEEIVAEEGDEFEDSCTEIDVMEFNQLSSLSLRCLPHL KNFCSREKTSRLCQAQLNPVATSVGLQSKEISEDEPRNPLQLFCEKILIPKLKKLELVSINVEKIWHGQLHRENTFPVQNLQTLYVDDCHSLKYLFSPSM VKSLVQLKYLTVRNCKSMEEIISVEGVEEGEMMSEMCFDKLEDVELSDLPRLTWFCAGSLIKCKVLKQLYICYCPEFKTFISCPDSANMTVDIEPGELHS RESDHNAVQPLFDEKVAFPSLAEIKISHIENLEKMWHNQLAEDSFCQLQSVTISSCKRLVRVFPSILLETFRMVEMLDIRHCPFLEEIFDLQETGASGSL QLRDLSLIGLGKLKHIWNKDPQGILSFQNLHALKVSDCNVLKNLFPFSIARELVQLEKLKIEHCGKLEEIIVKVDNGEAAHCFVFPLLTSLKLQELPEFR NLYPGKHTWKSPMLKRLAVSDCCNVALFGSKFLKSQETQGEVQLGIPAQQPLFFVEKVISNLEELSLGGKNTTASIIWHHQLPIECYSSLKVLKLHDFGV KSDPISFGFLQRLRNLETLSVTHSSFKKLFLYKGHSSFKKLPSIREVVGEERRALARLKNLTIHAVHDIKHIWKQDHLLAPILHNLKTLKVEDCHSLVSL APSYVCFQNLTTLDIQSCLGLLNLFTSSTAKSLVQLVKLTIAHCKKVTVVVARQGGDEADDEIIFSKLEYLELLDLQNLTSFCFGNYAFRFPSLKEMVVE ECPNMRIFSPGVLSTPKLLGVHWKKYSKNRVHWHGNLDITIQHLYTEMVGFDGVKRLKVSDFPQLKERWQCQLPFNFFRNLTNLTVDEYCYSLDALPSTL LQFMNDLQELQVRNCDLLEGVFDLKGISPEEGRVWLPLLYELNLIGLSRLRHICNTDPQGILEFRNLNFLEVHDCSSLRNIFTPSMALSLVHLQKIVIRN CDKMEEIITKERAGEEEAMDKIIFPVLKVIILESLPELSNIYSGSGVLNLTSLEEICIDDCPNMKIFISSLIEEPEPNSVDKGKEQRQGQGDNYNFTALL TYKVAFPELKKLRVDWNAIMEVTQCGQFRTEFFCRLKVLELVHFPIDCVDFPSWFLQRFNILESLVVCDASFEEIVRLEEMSSRPNQVFAQLRVLELSKL PELMHLSKESSQACQIFQNLEILRVSECGTLKTLIPMSVSFRCLMTLEVSKCNGLASLMSSSTAKNLVQLTSMSVVECETIEVVVADDENEAENEIVFHK LENLAFHCLPSLTSFYMQNCALMFPSLERVFIDQCPKMELFSRGVINTPKLERVQLTEGDSTGFWKDDLNLTIHNLFVKKSKLPSSSRQPSLARETTAAH KNQMYAVSEGPASENLHVNENPDAGKDSHPVIETSTNLVIKEQAMRNGLMKPGPQVTSIYQDSQATLNDKEDREQGQSPLAPIDIEAPISQQVQNDSQAT DEKEFPQDQFMTASSSQQKSIVLVSPPSAGEQSLASTSASSTNETSTQKLASHTSSRRTSETITEIESLFATMEQLVRPCPVSSSQPESSANTHTESYES DVGSPESHVYSMGLIKKILLKPLTEVARSPDGLLLLATMKNLKKSDLLNSQQLEIIQAYIDNFHSLVSNYPLYEHQIDRTSALKCSIEDKKKGISDLKNH YGDLINNASSLAAEREALKKRLDEIAEEEIHIREDADDLRTQLISWKAELETHMKALPEALRQQNEAENRTNNSNDYWGKIRSLFA

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G27220			NB-ARC domain-containing disea...		Potri.005G061860 [exp]	0	1
AT4G27220			NB-ARC domain-containing disea...		Potri.005G062130 [exp]	3.46	0.8565
AT2G16990			Major facilitator superfamily ...		Potri.009G138900 [exp]	4.47	0.8375
AT2G29970			Double Clp-N motif-containing ...		Potri.008G069100 [exp]	8.36	0.8157
AT5G09970		CYP78A7	"cytochrome P450, family 78, s...		Potri.005G200400 [exp]	11.22	0.7844
AT2G28350	ARF	ARF10	auxin response factor 10 (.1)		Potri.009G014800 [exp]	14.42	0.7550	ARF10.1
AT1G31490			HXXXD-type acyl-transferase fa...		Potri.001G128100 [exp]	16.43	0.8099
AT1G09420		G6PD4	glucose-6-phosphate dehydrogen...		Potri.005G005866 [exp]	17.20	0.7333
AT1G07200			Double Clp-N motif-containing ...		Potri.010G188200 [exp]	18.76	0.7776
					Potri.010G147200 [exp]	19.23	0.8020
AT3G47570			Leucine-rich repeat protein ki...		Potri.005G031300 [exp]	20.44	0.7906

Compare expression of checked genes

Potri.005G061860 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.