Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G27190 244 / 8e-66 NB-ARC domain-containing disease resistance protein (.1) AT4G27220 231 / 7e-62 NB-ARC domain-containing disease resistance protein (.1) AT1G63350 205 / 1e-53 Disease resistance protein (CC-NBS-LRR class) family (.1) AT4G26090 191 / 7e-49 RPS2 RESISTANT TO P. SYRINGAE 2, NB-ARC domain-containing disease resistance protein (.1) AT1G12280 190 / 7e-49 LRR and NB-ARC domains-containing disease resistance protein (.1) AT5G05400 185 / 4e-47 LRR and NB-ARC domains-containing disease resistance protein (.1) AT1G12220 182 / 2e-46 RPS5 RESISTANT TO P. SYRINGAE 5, Disease resistance protein (CC-NBS-LRR class) family (.1), Disease resistance protein (CC-NBS-LRR class) family (.2) AT1G61180 181 / 7e-46 LRR and NB-ARC domains-containing disease resistance protein (.1.2) AT1G12210 179 / 2e-45 RFL1 RPS5-like 1 (.1) AT1G61310 177 / 1e-44 LRR and NB-ARC domains-containing disease resistance protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G061860 [exp] 2578 / 0 AT4G27220 230 / 1e-61 NB-ARC domain-containing disease resistance protein (.1) Potri.005G062130 [exp] 2556 / 0 AT4G27220 256 / 5e-70 NB-ARC domain-containing disease resistance protein (.1) Potri.019G036875 [exp] 1757 / 0 AT4G27190 178 / 9e-45 NB-ARC domain-containing disease resistance protein (.1) Potri.013G015700 [exp] 1228 / 0 AT4G27190 257 / 2e-70 NB-ARC domain-containing disease resistance protein (.1) Potri.005G042900 [exp] 1179 / 0 AT4G27190 240 / 7e-65 NB-ARC domain-containing disease resistance protein (.1) Potri.013G015900 [exp] 1177 / 0 AT4G27190 268 / 5e-74 NB-ARC domain-containing disease resistance protein (.1) Potri.005G041101 [exp] 1165 / 0 AT4G27220 229 / 2e-61 NB-ARC domain-containing disease resistance protein (.1) Potri.005G042400 [exp] 1164 / 0 AT4G27220 234 / 4e-63 NB-ARC domain-containing disease resistance protein (.1) Potri.001G444050 [exp] 464 / 3e-134 AT4G27220 261 / 4e-72 NB-ARC domain-containing disease resistance protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10018937 [exp] 101 / 7e-21 AT3G07040 587 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10039509 [exp] 100 / 3e-20 AT3G14460 613 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10041243 [exp] 93 / 2e-18 AT3G07040 526 / 1e-172 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10024173 [exp] 93 / 3e-18 AT3G14460 681 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10005588 [exp] 89 / 5e-17 AT5G17680 499 / 2e-156 disease resistance protein (TIR-NBS-LRR class), putative (.1) Lus10039540 [exp] 88 / 8e-17 AT3G14470 727 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Lus10007261 [exp] 87 / 2e-16 AT3G14460 654 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10004719 [exp] 85 / 7e-16 AT5G36930 384 / 3e-113 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10026961 [exp] 84 / 1e-15 AT5G36930 420 / 2e-126 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10019530 [exp] 84 / 1e-15 AT3G07040 311 / 4e-95 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00931 [poplar] [flax] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Potri.013G027300.2 pacid=42810922 polypeptide=Potri.013G027300.2.p locus=Potri.013G027300 ID=Potri.013G027300.2.v4.1 annot-version=v4.1 ATGGCTGTGGATATCATTCTTTCTGTTGTATCACCTATTGTTGAGCTTGCAATTGGTTCCTTTAAAATACACATTTCTAATGCATTTTATTGCAAGAGCA ACCTCCGACATCTGAAGGAGGAAGTTGATAAGTTGAAAAATGCGCGAGAAAGGTTGCAACACTTGGTTGACGAGGATAGAAGAAAAGGGAAGGTGATCCA AGACGATGTTGCGAAGTGGCTACTTGAGGTGGACGGGATCACTGAAAAGGTGGAAAGGGAACTTGCTCAAGATGAGGGCGGAGTAAAGAAGAAATGCTTC ATGGGATTGTGTCCAAATTTTAAAACAAGGTACCAGTTTGGAAAGAAAGCAGAGGAGAAATTAGCAACAGTTAAAGCTAAACTAGAGGAACAACGCAGCT TTGGTTCGATTTCCTACCATGCTGCACCGTCAGGGGTGGAGGCCATGTCTGGAAAAGGCTATCAGGCCATGCAATCAAGAATACCAGTGTTTAATGAAAT CATGAATGCCTTAAAAGCTGCTGATGTGAACATAGTTGGGGTGTATGGAATGGGTGGTGTGGGAAAGACCACACTGGTGAAAGAGGTCTCCAAACAAGCC ATAGAGGATAAATTATTTGACAAGATGGTTATTGCCAGTGTAACTCGAAACCCAGACATCATGAAAATTCAAGGGCAAATTGCAGACCAGCTTGGCCTAA CATTCAACGAGGAAAGTGAATGGGGAAGAGCAGGTCGATTGCGTGAGAGGTTGAAGCAAGAGAAGAAGATTCTTGTTGTCCTAGATGATCTATGGAAGAG GCTTGATTTAGAAGCAATTGGGATTTCATTTAAGGATGAACAAAATGAATGCAAAATGCTGCTGACATCGAGAGAATTTGATGTTTTATCAAGTGAAATG GAAGTTGAGAAAAACTTCTCAATTAGTGGTTTAAAGGAAGATGAAGCTTGGGAGTTGTTCAAGAAAACGGCAGGTGGTAATGTTGAAAGTCCAGATGTCC AATCCATAGCATTGAAGATCGCAACAAAGTGTGCAGGTTTGCCCCTGGCCATTGTAACTGTTGCAAAGGCTTTAAAGGATAAGAGGCTGTCCGAGTGGAA GGATGCATTGCGAGAGCTGAAAAGACCGTCCCCTAGGAATTTCACAGGAGTGCAGGCAGAAGTGTATAGCGCTATAGAACTAAGCTACAAGCATCTTGGA AGTGAAGAGCTGAAGGCGATTTTTCTTCTTTCCAGTCGAATGGGCTACAACGCCTCCATTCAAGACTTGTTGAAATACAGCATGGGCTCAGGTTTGTTTT CTGATGTTGCTACCATAGAAGAAGTCCGAGATAAAGTGAATTCTTTGCTTCATAAACTCAAAACCTCCAGTTTGTTGCTCGATGGTGATACTAGTAAGCA GTTTTCTATTCATGATGTTGTTCGTGATGTTGCCATATCAATTGCTTTTAGAGATCACAATGTGTTTTTGAGGAGTGATGAGGTTGAATTGAAATGGCAG TATAAGGATTCACTGGAGAGTCATGCAGAGATTTGGTTACATGGTAATAGCTTTGGGTTTCCTGAAGATTTGCAATATCCACTACTCAAAGTTTTGAATA TGAATAGTGAAGATTCTTCTTTGGAAGTACCTGAAAACATATTTAGGGGCACGCAAAAACTCAAAGTCTTAGGCCTGACCAATCTATCTTTTCCAGCCCC GCATTCATCTCTTCATTTCCTAAAGAACCTCCGTTCATTGTGCCTTCATCAATCTTCACTTGGAGAGATAGCTATTATTGGGGAGCTAAAAAAATTAGAA ATCCTTAGTTTTGTTAAATCTAATATTAAGCATCTGCCGAAAGAAATAGGGCAATTGACCAAGTTAAAGTTATTAGATTTAAGTGATTGTTCTGAACTTG AAGTGATTTCACCAAATGTTATTTCAAATTTATCACTTTTAGAAGAATTGTTTGTAGGCAACAGCTTTCATCATTGGGATATTGAAGGACACAATAATGC TAGTCTTATCGAGCTAGAACACTTGTCCCACTTGACTAATTTAGACGTACATATGCTAGATTCCCGTGTTATGTCCACAGACTTGTTTTCTACAAAATTA GAAAGATTTAGAATATTCATAGGAGATGTTTGGGATTGGGACGGGGCCTATGAAACCTTAAGAACATTGAAGTTGAAGCTCAATGAAAGCACTGATCATT TGAAGCATGGAGTTCTGATGCTGCTAAAGAGAACTGAAGATTTGTATTTACTTGAAATGAAGGGTATTAAGAATGTCATTTGTGAACTGGATAGTGAAGG TTTTCCACAGCTGAAGTACCTCCATCTGCACAATAGTCCAGACATTCAATATATCATTGATACAATGAAAGGGGTTCCTGCGAACATCCTTCCATTTCCC ATGTTGGAGTCTTTGTTTCTATACAATTTGGTATCTTTAGAGAAGATTTATCATGGCACACTCAAGACACCATCTTTCGGCAAACTACAAAAGCTAGAAG TGAAACATTGTAATAAATTGAAGAACCTCTTCTCATTCTCCATTGCACGGGGTCTTTTGCTACTTCAAAGCATCAATATTACCTGCTGCCGGAACCTGGA AGAGATTGTTGTTGAAGAAAGTGAAGAATTTGACAACAAGAATGAAGAAATCAACTTGATGGAGTTCACTCAAGTACGCTCCTTGTCCTTAAAATATTTA CCGAATCTCAGAAACTTCTGCTCGAAAGAGAAGGCATCATGTTTATATCAAACACAATCAAAGTCAAGAACAACTGGCATGGATTTTGGAGAAATCATTT TGGAGGATGAGCCACATGCTCCAATGCAACTTTTTGATGAAAAGTTTGTGTTTCCGAACTTGGAGGATTTGAAATTGCATTCTATCAACATCGAAAGGCT ATGGGATGGCCAACTTCCAGCAATTACAGTTTCCATTCAAAATTTACAAAGACTGGTTGTGAAAAAATGTGGCAGTTTGAAATATATATTTTCCTCTTCT ATGGTTAAAAGTCTTGTACAACTCAAGCATCTTGCAATACATGATTGCATGTCAGTGGAAGAGATAATAGTAACAGAAGAATTAGATGAAGAAGAAAGGA CGAGTAAGATGGTATTCCTGAAACTAGAACACATTGAACTCTTGAGTCTTCCGAAACTGAAACACTTTTGTATTGGTTCTCATATTGAATGTCCATTGTT GAAAAGATTGGTGATAGACTGGTGTCATGACTTTCAGACATTCGTTTCCGAGTTTAGCAGCACAAACCTGACAACTAGAAATGGCGCCCGGGAAGTGAAC CTGGAGGAGAACTTCTACAATGCCATGCAACCTCTCTTTGATGACAAGGTTGTATTCCCTTGCTTAGCTGAAATCCAAATCTCACACATAGATAAGATAT GGCACAATCAACTTGCTGCCGGTTCTTTTTGTGAGCTGAGATCAATGAGTATTTCTGATTGTGATAAGCTGGTGAATATTTTTCCATCAATCTTGCTAAC AAGATTCCAAAGACTAGAGATGCTAGAAATTAGTCATTGTCATTCCTTAGAAACTATATTTGAGCTTCAAGGACTCGGCGGTGAAGAAATCCAAGCATTT AATGTCTTCCAGTTACAAGACCTGGATTTGTATAATCTACCCAAATTGAAGCATATATGGAATAAGGATCCGCAAGGAAGACTCATTTTCCAGAATCTGC ATTCTGTAAGGGTAGGGAAATGTAGTGCTCTGAAGAATCTCTTTCCAGTCTCCATTGCTAGAGACCTTCCACAACTTGAAAAGCTTGAGATAAAGGAGTG TGGGGTGGAGGAAATTGTTGCAAACGCAGAAGGTGATGAAACAGCCCCCTGTTTTGATTTTCCTCATCTAACCTCATTGACACTTGAAAAAATACCAGAA TTTAGGAACTTTTATCCAGGGAAACATTCTTGGGAATGTCCTATCTTAAAAAGTTTAGAGGTGTCGGGCTGTGGCAATGTGAAGTTATTTGGATCAGAAT CTCATACATCCCAAGAAATTCAAAGGGGAAGCCAACAGGACCAAATTCAGCAACCCCTCTTTTTTGTTGAAAAGGTGATCTCGACCTTGGAGGAATTGTC ATTAAGTGGTGAAAACCCCACAACGTCAATTATTTGGCGCTGCCAACTTCCAGAGAAGTACTATTCTGCGGTGAAACTTCTAAGGCTGCACTATTTTCAG GAAGAATCGGATACTATTCCATTTGGTTTCATACAAATATTGTGCAATCTGGAAACACTCTATGTGACACGTAGTTCTTTCAAAAGGCTATTCTCATATG AAGGGCTTACTGATGTGAATCAGAGACAAAGGATGCTTGGACGATTAAGGAATTTCAAAATAATAAGTTCAGTTGGCGATATGAGGCATATGTGGAAGGA TAATGACCAACTGGTTCAATTTCTTCAAAATCTTGGCACTCTAGAAGTAATTTCTTGTCACAGTTTGGTCAATCTAGCACCATCATCTGCTTCATTTGAA AATTTAACAATTTTAGATGTGCGGTGTTGCTTTGGATTATTGAACTTAATAACATCCTCAACTGCGAAAAGTCTAGTGCAGCTTGTAAAGTTGACCGTTC GTTCTTGCAAAAAGGTGATGGAAATAGTAGCAAAAGAGAGAGATGAAACAGAAGATGAGATCATTTTCAGCAAACTAGAATATTTGGAACTTGTCAAGTT AGAAAGCCTCACCAGCTTCTGCCCAGGAAATCACACCTTCAAATTCCCATCATTAAAGGAAATTGTTGTGAGACAATGCCCCAAGATGAGGATTTTCTCT CCCAGAGTTGTAAGCACGCCTAAGCTACAGGGAGTATGTTTTGCCAAGAATAAAGTGTGTTGGCAGGGAAATCTTAATAACACCATACAACAGCTGTACA CAGAAATGGTTGGATTTGGTAATATATGGGAGTTAAAGCTCTCTGATTTTCCCCAATTAAAAGAGAGATGGCACGACCAACTTCCCTTCAACTTTTGTAG AATTTTGGCAAACCTCACGGTGGATGACTGCGCATTTGTCTCCAATGCTATACCATCCAATCTACTACAGTTCATGAATAACTTGAGACATCTGTATGTG AGAAACTGTGATTCTCTTGAAGAAGTATTTGATTTGGAGGGGCTCAATGCTGAGGAAGGGCATGCTCAGCTGTTGCCCAATTTAAAGGAATTGCAGTTGA TTGATCTGCCAAGGCTGAGGGATATATGCAGCAGGGATCCTCAAGGAATTTTGGACTTCAAAAACCTGAAATCGCTGAAAGTTCATAATTGTAGCAGTTT GAGAGATTTATTTACACCATCCACGGCATCTGGCCTTGTGCAACTCAACAAGATAGAAATAAGAAACTGTGCCATGATGGAAAAGATCATCACAGAAGAG AGAGTAGAGGAAGCAGCAACATATAGAATCATATTCCCTGTACTGAAAGTGATAGTTCTCGAGTCCTTACATAGCATGACCAGTATCTATTCAGGAACTG GTATTCTGGGAATTCCATCCTTAGAGGAGATTGGCATAGACAATTGTCCAAATTTGAAGACATTTATTTCCTCATTTTTGAGTGAGCATGTACCGATTTC AGTCAATAAGGGACAAGGATATAGACTATATGAGCGAGACCATGATATTTCCACTGCACCATCTCTCAATCATAAGGTTGCATTTCCAAACATGAAAAAG TTGAGAGTGGAATGGAATGATGTGATGGAGGTTATACAGAATGGCCAATTCCGAGTTGAGTACTTCTACAAACTGGAAGGTCTTACACTCATGCGCTTCC CCTGTGACAATGTTGATTTTCCATCCCATTTTCTTCAAAGATTCATCAATTTAAAAAATCTTGTTGTAAGAGATGCCTCTTTCGAAGAAATAGTATTGTA TGAAGGGAAAGATGATGAAGAAAATCATATCAGGGTTTTAGCACAATTAAAAAAACTGGAGCTGTCTAAACTGCCGAAACTCATGCATCTGTCAAAGGAA GGTTCTCAGACATGCAAGATTTTTCAGAATTTGGAAAGTTTGAGAGTATTGGAATGTGGCATGCTGAAAATTCTAATTCCATCAGCATTGTCTTTCCAGT GTTTAACGACCCTGGAAGTGTCAAACTGTCATGGATTGATAAATTTGATGACGTCTTCAACAGCCAAATATCTGGTGCAGCTCACGTCTCTGAGTGTAAC TGAATGCAAAATGATTGAAGAAATTATAGTGAGCGAGGAGAATGAGGTAGCAAATGAGATCATTTTTCAGAAATTAGAGCATTTGAGACTTCGAAGCTTG CCAAGCCTCACAAGTTTCCACTCAGGGAAATGTGCGTTCACTTTTCCATCTTTGGAAGAAGTGTTCTTGATAGAATGCCCCAAGATGAAATTTTTTTCTG AAGGAATCATAAGCACACCAGAGCTGGAGACTGTCCTGTTAACAGAAGAGGACGATGAAGGGTACTGGGAGGAGGACCTTAATTCCACTGTACAAAAATT GTTTGTGGAGATGGGTGATGGAGCAGCGCAATCCGAACTGCTAAGCATACCCAAACAGCCAACATTAGCCCGTGAGGCTAAAGCAGATGGAAATGCACCA AGTGCTGTCTCTGAGAGACGAGCTTCTGAGGATTTGCATTTAACTGGGACCTCAGAAGCCAGAAAAGATATCTCTCCCGTTTTTGAAACATTGCTGAGAA ACAAACAAAATAGGATCAAAGGTGTTTTGCTAGAACCCAAGATTGCTCAATTAGCTTCAAGATACCAAGATTTTCATGCAGCTTCAAATGATAAGGATTC TAGACAAGGTCAAAGTTCCTCAACTCCCATGGATTCTAAAGCTCAGATCTCTCTACAAGAGCAGACAGATTCCCAAGCAACTGATAATGGTGAGACCTCA CTGGCCAATGCTATTCCTACTATTTCAGTTCAGCAGAGCTACAGAGTTCTTGTATCTCCTGCCACCTCTGTTGAACAAGTCTCTATGTTGACTTCTACAT CCTTAACCAACAGAACTTCCTCTCAAGAGCTCACATTCAGCACCGCTTCAAGCTCTAATGCTCCTTCTGGATCTCTCAAGTCCTGTGGTGTGAGCTTTGA GATATACAGGTGTTCTATAGATTTGTTGAAGGAGCTCTTAATGAAATCCCCTGCAGAAGTAGCCACATCAGCTGACCGCCTATTGCTGCTGTCCGGTTTG AAGAATTTAAAGAACTGTCCGTTTCTGAATTATCAGCAACAAAAAATCATTCAACTATACGTTGAAAATTTTGACACTTTGGTCACAAGCCACCCATTTG ATGAGCAAAAAATCGACTGGACTAGTTCTATCAAGTCCTCTATTGAAGATCACAAAAGGAGACTTGCCGAGCTGGATATTTCTGATGAAGATATTACCAG CAAGATTAGCAGGCTTAAAGCAGAAAAGGATGCCCTTAACAAGCGACTTCAGGAAATTCAGGAAGAAGAAGATCATATCCGAAGAAACAAGGAAAGTCTC CATGCCCAGAGAATCATTAGAAATGGAAGACTAGAAATACAGATTGGTGCTTTGTTGGAAGCTCAGAGGCATAAAAGAGAAACTGAGGGTAGGGCTAGCC ATGTTAATGAGAATTGGGCTGAGTTCAGGAGCTTGTTTGCTTAA
AA sequence Show only first row Show all	>Potri.013G027300.2 pacid=42810922 polypeptide=Potri.013G027300.2.p locus=Potri.013G027300 ID=Potri.013G027300.2.v4.1 annot-version=v4.1 MAVDIILSVVSPIVELAIGSFKIHISNAFYCKSNLRHLKEEVDKLKNARERLQHLVDEDRRKGKVIQDDVAKWLLEVDGITEKVERELAQDEGGVKKKCF MGLCPNFKTRYQFGKKAEEKLATVKAKLEEQRSFGSISYHAAPSGVEAMSGKGYQAMQSRIPVFNEIMNALKAADVNIVGVYGMGGVGKTTLVKEVSKQA IEDKLFDKMVIASVTRNPDIMKIQGQIADQLGLTFNEESEWGRAGRLRERLKQEKKILVVLDDLWKRLDLEAIGISFKDEQNECKMLLTSREFDVLSSEM EVEKNFSISGLKEDEAWELFKKTAGGNVESPDVQSIALKIATKCAGLPLAIVTVAKALKDKRLSEWKDALRELKRPSPRNFTGVQAEVYSAIELSYKHLG SEELKAIFLLSSRMGYNASIQDLLKYSMGSGLFSDVATIEEVRDKVNSLLHKLKTSSLLLDGDTSKQFSIHDVVRDVAISIAFRDHNVFLRSDEVELKWQ YKDSLESHAEIWLHGNSFGFPEDLQYPLLKVLNMNSEDSSLEVPENIFRGTQKLKVLGLTNLSFPAPHSSLHFLKNLRSLCLHQSSLGEIAIIGELKKLE ILSFVKSNIKHLPKEIGQLTKLKLLDLSDCSELEVISPNVISNLSLLEELFVGNSFHHWDIEGHNNASLIELEHLSHLTNLDVHMLDSRVMSTDLFSTKL ERFRIFIGDVWDWDGAYETLRTLKLKLNESTDHLKHGVLMLLKRTEDLYLLEMKGIKNVICELDSEGFPQLKYLHLHNSPDIQYIIDTMKGVPANILPFP MLESLFLYNLVSLEKIYHGTLKTPSFGKLQKLEVKHCNKLKNLFSFSIARGLLLLQSINITCCRNLEEIVVEESEEFDNKNEEINLMEFTQVRSLSLKYL PNLRNFCSKEKASCLYQTQSKSRTTGMDFGEIILEDEPHAPMQLFDEKFVFPNLEDLKLHSINIERLWDGQLPAITVSIQNLQRLVVKKCGSLKYIFSSS MVKSLVQLKHLAIHDCMSVEEIIVTEELDEEERTSKMVFLKLEHIELLSLPKLKHFCIGSHIECPLLKRLVIDWCHDFQTFVSEFSSTNLTTRNGAREVN LEENFYNAMQPLFDDKVVFPCLAEIQISHIDKIWHNQLAAGSFCELRSMSISDCDKLVNIFPSILLTRFQRLEMLEISHCHSLETIFELQGLGGEEIQAF NVFQLQDLDLYNLPKLKHIWNKDPQGRLIFQNLHSVRVGKCSALKNLFPVSIARDLPQLEKLEIKECGVEEIVANAEGDETAPCFDFPHLTSLTLEKIPE FRNFYPGKHSWECPILKSLEVSGCGNVKLFGSESHTSQEIQRGSQQDQIQQPLFFVEKVISTLEELSLSGENPTTSIIWRCQLPEKYYSAVKLLRLHYFQ EESDTIPFGFIQILCNLETLYVTRSSFKRLFSYEGLTDVNQRQRMLGRLRNFKIISSVGDMRHMWKDNDQLVQFLQNLGTLEVISCHSLVNLAPSSASFE NLTILDVRCCFGLLNLITSSTAKSLVQLVKLTVRSCKKVMEIVAKERDETEDEIIFSKLEYLELVKLESLTSFCPGNHTFKFPSLKEIVVRQCPKMRIFS PRVVSTPKLQGVCFAKNKVCWQGNLNNTIQQLYTEMVGFGNIWELKLSDFPQLKERWHDQLPFNFCRILANLTVDDCAFVSNAIPSNLLQFMNNLRHLYV RNCDSLEEVFDLEGLNAEEGHAQLLPNLKELQLIDLPRLRDICSRDPQGILDFKNLKSLKVHNCSSLRDLFTPSTASGLVQLNKIEIRNCAMMEKIITEE RVEEAATYRIIFPVLKVIVLESLHSMTSIYSGTGILGIPSLEEIGIDNCPNLKTFISSFLSEHVPISVNKGQGYRLYERDHDISTAPSLNHKVAFPNMKK LRVEWNDVMEVIQNGQFRVEYFYKLEGLTLMRFPCDNVDFPSHFLQRFINLKNLVVRDASFEEIVLYEGKDDEENHIRVLAQLKKLELSKLPKLMHLSKE GSQTCKIFQNLESLRVLECGMLKILIPSALSFQCLTTLEVSNCHGLINLMTSSTAKYLVQLTSLSVTECKMIEEIIVSEENEVANEIIFQKLEHLRLRSL PSLTSFHSGKCAFTFPSLEEVFLIECPKMKFFSEGIISTPELETVLLTEEDDEGYWEEDLNSTVQKLFVEMGDGAAQSELLSIPKQPTLAREAKADGNAP SAVSERRASEDLHLTGTSEARKDISPVFETLLRNKQNRIKGVLLEPKIAQLASRYQDFHAASNDKDSRQGQSSSTPMDSKAQISLQEQTDSQATDNGETS LANAIPTISVQQSYRVLVSPATSVEQVSMLTSTSLTNRTSSQELTFSTASSSNAPSGSLKSCGVSFEIYRCSIDLLKELLMKSPAEVATSADRLLLLSGL KNLKNCPFLNYQQQKIIQLYVENFDTLVTSHPFDEQKIDWTSSIKSSIEDHKRRLAELDISDEDITSKISRLKAEKDALNKRLQEIQEEEDHIRRNKESL HAQRIIRNGRLEIQIGALLEAQRHKRETEGRASHVNENWAEFRSLFA

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G27190			NB-ARC domain-containing disea...		Potri.013G027300 [exp]	0	1
AT2G11520		CRCK3	calmodulin-binding receptor-li...		Potri.006G064200 [exp]	6.63	0.7701	Pt-CRCK3.1
AT1G20670			DNA-binding bromodomain-contai...		Potri.004G206200 [exp]	7.93	0.8024
AT5G42950			GYF domain-containing protein ...		Potri.002G262300 [exp]	8.12	0.8138
AT3G19190		ATATG2	autophagy 2 (.1)		Potri.009G102900 [exp]	10.09	0.8128
AT4G19440			Tetratricopeptide repeat (TPR)...		Potri.003G105700 [exp]	14.28	0.8090
AT3G14470			NB-ARC domain-containing disea...		Potri.001G029300 [exp]	16.24	0.7985
AT4G20060		EMB1895	EMBRYO DEFECTIVE 1895, ARM rep...		Potri.018G118800 [exp]	19.49	0.8064
AT2G37340		RSZ33, ATRSZ33,...	arginine/serine-rich zinc knuc...		Potri.006G205800 [exp]	20.83	0.7879
AT3G17450			hAT dimerisation domain-contai...		Potri.014G114100 [exp]	22.18	0.8027
AT1G09730			Cysteine proteinases superfami...		Potri.002G105700 [exp]	25.69	0.7841

Compare expression of checked genes

Potri.013G027300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.