Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ADR1.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G33300 888 / 0 ADR1-L1 ADR1-like 1 (.1.2) AT5G04720 843 / 0 PHX21, ADR1-L2 PHOENIX 21, ADR1-like 2 (.1) AT1G33560 754 / 0 ADR1 ACTIVATED DISEASE RESISTANCE 1, Disease resistance protein (CC-NBS-LRR class) family (.1) AT5G47280 655 / 0 ADR1-L3 ADR1-like 3 (.1) AT5G66900 351 / 2e-108 Disease resistance protein (CC-NBS-LRR class) family (.1) AT5G66910 335 / 3e-102 Disease resistance protein (CC-NBS-LRR class) family (.1) AT5G66890 237 / 4e-70 Leucine-rich repeat (LRR) family protein (.1) AT3G26470 128 / 2e-33 Powdery mildew resistance protein, RPW8 domain (.1) AT3G50950 118 / 5e-27 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 (.1.2) AT5G17680 117 / 1e-26 disease resistance protein (TIR-NBS-LRR class), putative (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G129300 [exp] 1441 / 0 AT4G33300 902 / 0.0 ADR1-like 1 (.1.2) Potri.007G039300 [exp] 372 / 1e-116 AT5G66900 540 / 0.0 Disease resistance protein (CC-NBS-LRR class) family (.1) Potri.007G039100 [exp] 363 / 3e-113 AT5G66900 474 / 3e-156 Disease resistance protein (CC-NBS-LRR class) family (.1) Potri.007G038700 [exp] 360 / 8e-112 AT5G66900 481 / 3e-158 Disease resistance protein (CC-NBS-LRR class) family (.1) Potri.007G038900 [exp] 280 / 3e-86 AT5G66900 336 / 4e-108 Disease resistance protein (CC-NBS-LRR class) family (.1) Potri.007G039000 [exp] 245 / 2e-70 AT5G66900 343 / 2e-107 Disease resistance protein (CC-NBS-LRR class) family (.1) Potri.005G007001 [exp] 143 / 8e-35 AT3G14470 647 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Potri.005G031101 [exp] 129 / 3e-30 AT5G17680 557 / 8e-178 disease resistance protein (TIR-NBS-LRR class), putative (.1) Potri.003G200800 [exp] 126 / 2e-29 AT3G14460 509 / 7e-157 LRR and NB-ARC domains-containing disease resistance protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021769 [exp] 754 / 0 AT4G33300 583 / 0.0 ADR1-like 1 (.1.2) Lus10032759 [exp] 692 / 0 AT1G33560 543 / 0.0 ACTIVATED DISEASE RESISTANCE 1, Disease resistance protein (CC-NBS-LRR class) family (.1) Lus10022464 [exp] 367 / 2e-114 AT5G66900 531 / 2e-177 Disease resistance protein (CC-NBS-LRR class) family (.1) Lus10007359 [exp] 313 / 1e-93 AT5G66900 473 / 3e-154 Disease resistance protein (CC-NBS-LRR class) family (.1) Lus10020779 [exp] 282 / 5e-83 AT5G66900 434 / 5e-141 Disease resistance protein (CC-NBS-LRR class) family (.1) Lus10016770 [exp] 145 / 1e-35 AT5G66920 837 / 0.0 SKU5 similar 17 (.1) Lus10034761 [exp] 135 / 3e-33 AT5G66900 197 / 1e-54 Disease resistance protein (CC-NBS-LRR class) family (.1) Lus10005218 [exp] 123 / 2e-28 AT3G14470 379 / 2e-113 NB-ARC domain-containing disease resistance protein (.1) Lus10039509 [exp] 112 / 7e-25 AT3G14460 613 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10019654 [exp] 110 / 2e-24 AT4G12010 376 / 2e-110 Disease resistance protein (TIR-NBS-LRR class) family (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00931 [poplar] [flax] NB-ARC NB-ARC domain CL0023 [poplar] [flax] PF05659 [poplar] [flax] RPW8 Arabidopsis broad-spectrum mildew resistance protein RPW8
Representative CDS sequence Show only first row Show all	>Potri.014G035700.1 pacid=42763304 polypeptide=Potri.014G035700.1.p locus=Potri.014G035700 ID=Potri.014G035700.1.v4.1 annot-version=v4.1 ATGGCGGTCACAGACCTCTTTGCAGGGGAGATAGCCACCGAACTCCTCAAATTGCTATTTTCAATATCAAGAAAATCCCGCCCATGTAAATCAAGTGCAG AATCTTTAATGGCAAGCGTAAACGAACTCGTGCCTATAATTCAAGAGATCAAGTACTCCGGTGTTGAACTCCCTTCCAACCGCCAATTCCAACTCGACAG TCTCTCTCGCACTCTCACTGAAGGCCTTGAGCTCTCCCGCAAAGTCTTAGCTTCAAACCGCTGGAACGTCTACAAAAACCTTCAGCTAGCAAGAAAGATG GAAAAGATGGAAAAGAAAATATCCACGTTTATCAACGGACCTTTACAGGCACATATATTAGCTGACGTGCATCACATGAGGTTTGAAACTACAGAGAGGT TCGATAAGTTGGACTGGTCAGCCAAGAGGCTAGAGGAGAGGATAGGGAACTTGAAGATCGGGTTGGGAGGTGGTGGTGGTGGTGGTGTTGGTGGCTGGAT GGACGAAGCGGTGAAGAGAGTGGAGGAGGAGAGGAAGTGGGATGGGAGTTTTGGGCAAAATTTTTATCTGGGGTTGGGGATTGAAGAAGGGAAGAGGAAG GTGAAAGAAATGGTTTTTGAGAGAGAGATTTTCAATGTTGTTGGAATTTGTGGGATTGGTGGGTCAGGCAAAACTACTTTGGCTAATGAAATTTGTAGAG ATGATCAAGTTAGACGTCACTTTGAGAACAGGATTTTGTTCTTGACAGTATCACAGTCTCCGAACGTGGAGCAATTGAGGGCGAAAATTTTGGGGTTTAT TACAGGGGCTGATGGAATGGGTGGTATGGGCAATGATTTGGTCCAAAAATCTAGTTTTCAATTTGAATGGAGAATTGGAGCCCCAGCGTTGATTGTTCTT GATGATGTGTGGTCAGTCAAGGTGCTTGAGCAGCTCATTTATAAAGTTGCTGGATGTAAAACACTTGTGGTTTCGCGTTTCAAATTCCCGACAGTTTTTG ATGCTACTTACAATGTCGAATTGTTGAGAGGAGATGAAGCAATCTCCTTGTTTTGCCACTCTGCTTTTGGAAAGACATCTATTCCACCTGCTGCTGATTC AAATTTGGTCAAGCAGATCGTTGATGAGTGTAAAGGCCTGCCCTTGGCTCTCAAAGTGATTGGAGCTTCGCTAAGGGACCAACCTGAAATGTATTGGGCA AGTGCCAAAAAGAGGCTGTCAAGAGGTGAACCTATTTGTGAGTCTCATGAAAGCAAGTTGCATGATAGGATGGCCATTAGTACCCAGTTCTTATCTAAAA AGGTCAGGGAATGTTTCTTGGATTTGGGATCCTTCCCTGAAGATAAGAAGATCCCTCTTGATGTTCTCATCAATGTGTGGGTCGAGATACACGACCTTGA TGATGAAGAAGCATTTGCAATTCTTGTTGAGCTATCTGACAAGAATCTTCTCACCCTGGTGAGGGATGCACGAGCTGGAGACAAGTATAGCAGCTACTAT GAGATTTGTGTGGTGCAACATGATGTGTTGCGGGACCTTGCTATTCATTTGAGCTCGTGTGGAGATGTAAATGAGTGCAAGCGATTACTTATGCCAAGAA GAGAAGCGCAGCTTCCAAAGGAATGGGAGAGAAATGCGGACCGACCATTCAATGCTCAAATTGTTTCAATTCATACTGGTGAAATGAATGAAATGGATTG GTTCCGCATGGATTTTCCCAAGGCTGAAGTGCTCATCCTGAACTTCTCTGCAAATGAGTTCTTATTGCCTCCTTTCATTGATGACATGCCAAAGCTCAGG GCATTGGTAATGATAAATTACAGTACAAGCAACGCAATCGTTGGCAACTTCTCCGTTTTTTCTAATTTAGCTAATTTGAAGAGCCTTTGGCTTGAGAAAG TATCCCTTGCTCGATTATCTGAATTTACTGTCCCTTTAAAAAAATTACGAAAAATATCTCTAATCCTGTGCAAGATAAACAACAGCCTTGATGATTCTGT CATAGACTTATCCCACATATTCCCTTGTCTCTTAGAGATTACAATCGATCACTGTGAAGATTTAATCCGGTTGCCCTCCAGCATTTCTAGGATGCAATCA CTCAAGAGTCTGAGTATCACCAATTGCCACAACCTAGAGAAACTGCCTCCCAATCTGGGCAACTTAAAATCTCTACAAATTCTAAGGCTGTATGCTTGTC CAACCCTGAAAATGCTTCCCCCAAGTATATCTGACCTAGTTTGCTTGAAGTTCTTAGACATCTCTCAATGTGTCAATTTGAAAGCTCTTCCTGAAGGGAT TGGTAAACTATCAAGGTTGGAGAAGATTGACATGAGAGAGTGCTCACTGATGAAGCTGCCATATTCTGTTGCATCATTAGAGTCTTTACGTGTAGTAATC TGCGATGAAGATGTTTCTTGGTTATGGATGGATTTGAAGAAGGTTAATCTTGATGTCCAAGTTGCCGAAAAGTGCTTCAGTCTGGACTGGCTTGATGATT GTTAA
AA sequence Show only first row Show all	>Potri.014G035700.1 pacid=42763304 polypeptide=Potri.014G035700.1.p locus=Potri.014G035700 ID=Potri.014G035700.1.v4.1 annot-version=v4.1 MAVTDLFAGEIATELLKLLFSISRKSRPCKSSAESLMASVNELVPIIQEIKYSGVELPSNRQFQLDSLSRTLTEGLELSRKVLASNRWNVYKNLQLARKM EKMEKKISTFINGPLQAHILADVHHMRFETTERFDKLDWSAKRLEERIGNLKIGLGGGGGGGVGGWMDEAVKRVEEERKWDGSFGQNFYLGLGIEEGKRK VKEMVFEREIFNVVGICGIGGSGKTTLANEICRDDQVRRHFENRILFLTVSQSPNVEQLRAKILGFITGADGMGGMGNDLVQKSSFQFEWRIGAPALIVL DDVWSVKVLEQLIYKVAGCKTLVVSRFKFPTVFDATYNVELLRGDEAISLFCHSAFGKTSIPPAADSNLVKQIVDECKGLPLALKVIGASLRDQPEMYWA SAKKRLSRGEPICESHESKLHDRMAISTQFLSKKVRECFLDLGSFPEDKKIPLDVLINVWVEIHDLDDEEAFAILVELSDKNLLTLVRDARAGDKYSSYY EICVVQHDVLRDLAIHLSSCGDVNECKRLLMPRREAQLPKEWERNADRPFNAQIVSIHTGEMNEMDWFRMDFPKAEVLILNFSANEFLLPPFIDDMPKLR ALVMINYSTSNAIVGNFSVFSNLANLKSLWLEKVSLARLSEFTVPLKKLRKISLILCKINNSLDDSVIDLSHIFPCLLEITIDHCEDLIRLPSSISRMQS LKSLSITNCHNLEKLPPNLGNLKSLQILRLYACPTLKMLPPSISDLVCLKFLDISQCVNLKALPEGIGKLSRLEKIDMRECSLMKLPYSVASLESLRVVI CDEDVSWLWMDLKKVNLDVQVAEKCFSLDWLDDC

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G33300		ADR1-L1	ADR1-like 1 (.1.2)		Potri.014G035700 [exp]	0	1	ADR1.2
AT4G17900			PLATZ transcription factor fam...		Potri.001G141500 [exp]	2.23	0.8680
AT4G24240	WRKY	ATWRKY7, WRKY7	WRKY DNA-binding protein 7 (.1...		Potri.007G047400 [exp]	2.44	0.8773	WRKY15.1
AT1G53050			Protein kinase superfamily pro...		Potri.013G130000 [exp]	4.58	0.8845
AT5G66900			Disease resistance protein (CC...		Potri.007G039100 [exp]	8.12	0.8759
AT5G48380		BIR1	BAK1-interacting receptor-like...		Potri.008G078900 [exp]	9.94	0.8417
AT5G48380		BIR1	BAK1-interacting receptor-like...		Potri.002G240000 [exp]	10.00	0.8711
AT5G43470		HRT, RCY1, RPP8	RECOGNITION OF PERONOSPORA PAR...		Potri.003G149800 [exp]	12.72	0.8585
AT5G66900			Disease resistance protein (CC...		Potri.007G038900 [exp]	14.38	0.8527
AT1G03370			C2 calcium/lipid-binding and G...		Potri.006G003200 [exp]	14.96	0.8569
AT2G02800		Kin2, APK2B	protein kinase 2B (.1.2)		Potri.008G148000 [exp]	15.96	0.8304	APK2.2

Compare expression of checked genes

Potri.014G035700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.