Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G27190 178 / 6e-45 NB-ARC domain-containing disease resistance protein (.1) AT4G26090 147 / 2e-35 RPS2 RESISTANT TO P. SYRINGAE 2, NB-ARC domain-containing disease resistance protein (.1) AT4G27220 141 / 3e-33 NB-ARC domain-containing disease resistance protein (.1) AT1G61190 134 / 3e-31 LRR and NB-ARC domains-containing disease resistance protein (.1) AT1G61180 132 / 1e-30 LRR and NB-ARC domains-containing disease resistance protein (.1.2) AT1G63350 130 / 4e-30 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G61310 130 / 4e-30 LRR and NB-ARC domains-containing disease resistance protein (.1) AT4G10780 129 / 8e-30 LRR and NB-ARC domains-containing disease resistance protein (.1) AT1G12210 121 / 3e-27 RFL1 RPS5-like 1 (.1) AT5G63020 118 / 2e-26 Disease resistance protein (CC-NBS-LRR class) family (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G027300 [exp] 1728 / 0 AT4G27190 244 / 8e-66 NB-ARC domain-containing disease resistance protein (.1) Potri.005G062130 [exp] 1689 / 0 AT4G27220 256 / 5e-70 NB-ARC domain-containing disease resistance protein (.1) Potri.005G061860 [exp] 1666 / 0 AT4G27220 230 / 1e-61 NB-ARC domain-containing disease resistance protein (.1) Potri.013G015700 [exp] 1052 / 0 AT4G27190 257 / 2e-70 NB-ARC domain-containing disease resistance protein (.1) Potri.013G015900 [exp] 1038 / 0 AT4G27190 268 / 5e-74 NB-ARC domain-containing disease resistance protein (.1) Potri.005G042400 [exp] 1027 / 0 AT4G27220 234 / 4e-63 NB-ARC domain-containing disease resistance protein (.1) Potri.005G041101 [exp] 1019 / 0 AT4G27220 229 / 2e-61 NB-ARC domain-containing disease resistance protein (.1) Potri.005G042900 [exp] 1019 / 0 AT4G27190 240 / 7e-65 NB-ARC domain-containing disease resistance protein (.1) Potri.001G444500 [exp] 359 / 4e-100 AT4G27190 241 / 5e-65 NB-ARC domain-containing disease resistance protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002736 [exp] 68 / 5e-11 AT3G14470 317 / 1e-98 NB-ARC domain-containing disease resistance protein (.1) Lus10016316 [exp] 64 / 2e-09 AT3G14470 494 / 6e-156 NB-ARC domain-containing disease resistance protein (.1) Lus10039509 [exp] 61 / 1e-08 AT3G14460 613 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10019530 [exp] 58 / 1e-07 AT3G07040 311 / 4e-95 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10020016 [exp] 57 / 2e-07 AT3G07040 563 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10005218 [exp] 57 / 3e-07 AT3G14470 379 / 2e-113 NB-ARC domain-containing disease resistance protein (.1) Lus10018937 [exp] 56 / 6e-07 AT3G07040 587 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10007813 [exp] 56 / 6e-07 AT5G36930 368 / 1e-107 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10002247 [exp] 54 / 2e-06 AT5G36930 363 / 1e-108 Disease resistance protein (TIR-NBS-LRR class) family (.1), Disease resistance protein (TIR-NBS-LRR class) family (.2) Lus10028639 [exp] 54 / 2e-06 AT3G07040 579 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00931 [poplar] [flax] NB-ARC NB-ARC domain
Representative CDS sequence Show only first row Show all	>Potri.019G036875.1 pacid=42774222 polypeptide=Potri.019G036875.1.p locus=Potri.019G036875 ID=Potri.019G036875.1.v4.1 annot-version=v4.1 ATGGAAGCCCTTTTATCCTCTATTATCGATGTCAGTATTACCCACCTCATACGTCATATTAGCTACCCTCTCGAGTACAAGAAAAATGCCGAGAAACTAA CCCATCAAATTGACAAGTTAAAAGCAATGCGAGACAGAGTGCGGGGCGCAGTTGAGGAAGCTGAGCTTAATGGAGAAATGATAACAATTGATGTCAAATG TTGGCTGCAAGATGTGAATAAGATTATTGAAGAAGTGGACCTTGTGCTCAGTGTTGAAAATGAAAGAGCAAGGAGGTTTCCTTTTGGATCGTGTCTAAGC ATCAAGTCACACTACCAGGTTGGCAGGAAAGCCAAGAAGCTAGCCTATGAAGTTTCTGAACTACAGATGAGTGGTAAATTTGATGCAATTACCTCCCACT CTGCTCCACCTTGGATGTTTGACGGTGATCACGAGTCCTTACCATCAAGACTGTTGCTTTGTAAAGCAATCATGGATGCTTTGAAAGATGATGATATCAA CATGGTTGGTGTGTATGGGATAGGTGGCGTGGGTAAGACCACCCTGGTGAAACAGGTTGCCGTACAAGCAAAGGAGCAGAAGCTTTTTGATGTGGTGCTT ATGGTTGTTGTATCTGAGGCTTTGAATATTAGGAGAATTCAAGAACAGATTGCAGACATGTTGGGCTTACACCTAGATGCAGATACTGACGAGGGAAGAT CATGTCAGTTATATGAGAAATTGAAGCATGAGAACAACATTCTTTTGATCCTGGATGATTTGTGGGAGAGACTCGATTTGGAGAGAATTGGGATTCCATC CAAGGATGAACACAGTGGGTGCAAGATATTGTTTGTTTCTAGAATTCCTGATGTTCTGTCAAATCAAATGGGTTGTCAAAGGACCTTTGAAGTTTTGAGT TTGTCTGACGAAGAAGCCTGGGAGTTATTTAAGAATACTATCGGTGATGATCTTGTAAATCCTTTTATGCGGTCGTTTGCTGTTGAGATAGCCAAGAAGT GTTCAGGTTTGCCGGTTGTCATTGTATCAGTTGCAAGATATTTGAAGAAGAAGAAGAGTTTAACTGAGTTTAAGAAGGTCTTGAAAGAACTAAGAAGTTC TTCCCTAACAAGCTCAACAACATCACAAAATATAAATGCTGTTTTAGAAATGAGATATAACTGTTTAGAAAGTGACCAGCTCAAGTCAGCTTTCCTTCTT TATGGTCTAATGGGTGATAATGCTTCCATACGCAATCTGCTCAGATATGGTCTTGGTTTGGGCTTGTTTCCTGATGCTGTTTCATTGGAAGAAGCACAGT ACATTGCACAGTCAATGGTACGAAAACTAGGGGACTCTTCTTTGTTGTTTGATCATAATGTTGGTGAGCAATTTGCCCAGGCTGTTCATGATGCTGCTGT ATCAATAGCTGATAGGTACCACCATGTCTTGACAACAGATAATGAAATTCAAGTGAAGCAGCTTGATAACGATGCACAAAGGCAGCTCAGACAAATCTGG TTACATGGCAATATTAGTGAGCTTCCAGCAGACTTGGAATGCCCCCAGCTTGACCTTTTTCAAATATTTAATGATAATCATTATCTGAAAATAGCTGATA ACTTTTTTTCAAGAATGCACAAACTCAGAGTCTTAGGTTTGAGTAATTTGTCTTTATCATCCCTACCTTCTTCTGTTTCTTTGTTGGAGAATCTTCAAAC ATTGTGTCTGGATCGTTCCACATTGGACGACATATCTGCTATCGGGGATCTAAAGAGATTAGAAATCCTAAGTTTCTTTCAATCTAACATCAAACAGTTA CCCAGGGAAATAGCGCAGCTGACAAAGTTGAGGTTATTAGATTTAAGTGATTGTTTTGAACTCGAAGTGATTCCACCAGATGTCTTCTCAAAGTTATCTA TGTTAGAAGAATTGTATATGAGAAACAGCTTTCATCAGTGGGATGCTGAAGGAAAGAACAATGCGAGTCTTGCAGAGTTGGAGAACTTGTCTCACCTAAC CAATGCAGAGATACATATTCAAGATTCCCAGGTTTTGCCATATGGCATAATCTTTGAAAGATTGAAAAAGTATAGAGTTTGTATAGGAGATGATTGGGAC TGGGACGGTGCATATGAAATGTTAAGAACAGCAAAGCTCAAGCTTAACACAAAAATTGATCATCGAAACTATGGAATCCGGATGTTGTTGAACAGAACTG AAGATCTTTATTTGTTTGAAATTGAAGGTGTCAACATCATTCAAGAACTGGATAGGGAAGGTTTTCCACATTTAAAGCACCTCCAATTGCGTAATAGCTT TGAGATTCAATATATAATCAGCACGATGGAAATGGTTTCTTCCAATGCCTTTCCTATTTTGGAGTCTTTAATTCTCTATGATTTGTCATCCTTGAAGAAG ATTTGCCATGGTGCACTCAGAGTAGAGTCTTTTGCTAAATTACGCATCATAGCAGTGGAACATTGCAATAAATTGACCAACCTCTTCTCTTTCTTTGTTG CACGAGGCCTCTCACAACTACAAAAGATCAAAATTGCTTTTTGTATGAAAATGGAAGAAGTTGTTGCTGAGGAAAGTGATGAACTTGGCGACCAGAATGA AGTAGTTGATGTGATTCAGTTCACTCAATTGTATTCCCTATCACTGCAGTATTTGCCACATCTCATGAACTTCTACTCCAAAGTGAAGCCATCTTCTTTA TCTCGAACACAACCAAAGCCGTCGATAACTGAAGCAAGATCTGAAGAAATCATTTCAGAGGATGAGCTGAGAACCCCTACACAACTTTTCAATGAAAAGA TTTTGTTCCCAAACTTGGAGGATTTGAACTTGTATGCAATTAACATTGACAAGCTATGGAATGACCAGCACCCATCAATTTCAGTTTCCATTCAAAATTT GCAAAGATTGGTTGTGAATCAATGTGGCAGCCTCAAATATCTATTTCCATCTTCTTTGGTGAATATTCTCGTGCAGCTCAAACATCTTTCTATAACCAAT TGTATGTCAGTGGAAGAAATAATTGCAATTGGAGGATTAAAGGAAGAAGAAACAACAAGTACAGTGTTCCCTAAACTAGAGTTCATGGAGCTCTCTGATC TTCCAAAACTCAGACGATTCTGTATTGGCTCTTCAATTGAGTGTCCTTTGCTGAAACGGATGAGAATATGTGCTTGTCCTGAATTTAAGACATTTGCTGC TGATTTTTCATGTGCAAATATCAATGATGGCAATGAACTTGAAGAAGTGAACTCGGAGGAGAACAACAACAATGTTATTCAATCTCTCTTTGGTGAAAAG GTAATATTCCCCAGCTTAGCTGAAATTGAGATCTCCCATATTGATAACTTGGAAAAGATATGGCATAATAATCTTGCTGCTGGTTCCTTTTGCGAACTAA GATCAATTAAAATTAGAGGTTGCAAAAAGATAGTGAATATTTTTCCATCAGTTTTGATACGGAGTTTCATGAGATTAGAGGTGTTGGAGATTGGGTTTTG TGATCTGTTAGAAGCCATATTTGACCTCAAAGGACCAAGTGTTGATGAAATTCAACCTTCCAGCGTTGTTCAGTTACGAGACTTGTCCTTGAACAGTCTT CCTAAATTGAAGCATATATGGAATAAAGATCCTCAAGGAAAGCACAAATTTCACAATCTACAAATTGTAAGGGCTTTTAGTTGTGGTGTTTTAAAGAATC TATTTCCATTCTCCATTGCTAGAGTTCTTCGACAACTTGAAAAGCTAGAGATAGTGCATTGTGGGGTGGAGCAAATTGTTGCCAAGGAAGAAGGTGGCGA AGCATTCCCTTATTTTATGTTTCCTAGGTTAACCTCCTTGGATCTTATTGAAATACGAAAATTCAGGAACTTCTATCCAGGGAAACATACATGGGAATGT CCAAGGTTAAAAAGTTTAGCAGTGTCGGGCTGTGGCAATATCAAGTACTTCGATTCAAAATTTCTTTACCTACAAGAAGTTCAAGGTGAAATTGATCCCA CTGTCCCAATACAGCAACCTCTCTTCTCTGATGAAGAGATAATCTCCAACTTGGAGGAATTGTCATTGAATGGGGAAGACCCAGCTACTTCAATTATTTG GTGTTGCCAATTTCCAGGGAAGTTCTATTCCAGGTTGAAAGTTATCAAGCTGAAAAACTTTTATGGAAAGCTAGATCCTATTCCTTTTGGTTTCCTACAA AGCATACGCAATCTAGAAACACTCTCTGTGTCATGTAGTTCTTTCGAAAAGATATTCTTGAATGAAGGATGTGTTGATAAAGATGAAGACATTCGGGGGC CTGTTGATTCAGATGAATATACTAGGATGCGTGCAAGGTTAAAAAATTTAGTTATAGATTCAGTTCAAGATATAACACACATATGGGAGCCAAAATACAG GCTGATTTCAGTTGTTCAGAATCTCGAGTCTCTAAAAATGCAGTCTTGTAACAGTTTGGTCAATTTAGCACCGTCAACTGTATTGTTTCATAATTTAGAA ACTCTTGATGTACACTCTTGCCATGGATTATCGAACCTATTAACATCCTCAACAGCCAAAAGTCTTGGGCAACTCGTGAAGTTGATCGTAGTTAATTGCA AATTGGTGACAGAAATTGTGGCAAAACAGGGGGGTGAAATAAATGATGATATCATATTCAGCAAACTAGAATATCTGGAACTTGTTCGATTAGAAAATCT CACAAGCTTCTGCCCTGGAAATTACAACTTCATATTCCCATCTTTGAAAGGAATGGTGGTTGAACAATGCCCAAAGATGAGAATTTTCTCTCAAGGAATA TCAAGCACACCAAAGCTACAGGGAGTATATTGGAAAAAGGATTCTATGAATGAAAAGTGTTGGCATGGCAACCTTAATGCCACCTTACAACAGTTGTACA CAAAAATGGTTGGATGCAATGGCATATGGAGTTTGAAGCTCTCTGACTTCCCCCAATTGAAAGATAGATGGCACGGACAACTTCCCTTCAACTGCTTTAG CAATTTAGGAAATCTCACAGTGGATAACTGTGCAATTGTGTCTACTGCTATTCCATCCAATATACTAAAGTTCATGAATAATTTGAAATATCTGCATGTG AAGAACTGTGAGTCTCTTGAAGGAGTATTTGATTTGGAAGGGCTCAGTGCCCAGGCGGGGTATGATAGGCTGTTGCCCAATTTACAAGAATTGCACTTGG TCGACCTACCTGAGTTGAGGCATATATGGAACAGGGATCTTCCTGGAATTTTGGACTTTAGAAACCTGAAAAGGTTGAAAGTTCATAATTGTAGCAGCTT GAGAAACATATTTTCACCATCCATGGCATCAGGTCTTGTGCAACTCGAGAGGATAGGGATAAGAAACTGTGCTTTGATGGACGAAATAGTAGTTAACAAG GGAACTGAAGCAGAAACTGAGGTTATGTTTCACAAATTGAAACATTTGGCACTTGTCTGTTTGCCACGCCTTGCAAGCTTTCATTTGGGTTATTGTGCAA TCAAGCTTCCATCTTTAGAGTGCGTGCTAGTGCAAGAGTGCCCCCAAATGAAAACTTTTTCTCAAGGAGTCGTAAGCACACCAAAGCTACGGAAAGTAGT ACAGAAAGAATTTGGAGATAGCGTACATTGGGCACACGACCTTAATGCCACCATACACAAGTTGTTCATAGAAATGAGTGATATAGTGGTACAGTCCAAA CTGCTGAGCTTACCCAACGAGCCTACACAAGATAAAAATGGACAGCATACTGGATCAGAGGGACAAGCTTCTGAGAATTTGCATGTCACTGAATATCCAG ATGGCACTAAAGAATACCCTCCAGTCCCTCAAAAAGCATTCAACACCAAAGAGCATGTCATCAAAAGTGAACCTGAGATCATTCAATTGACCTCTAGATA CCAAGAGTCTCTTACTGCTTCAAATGATGAGGAAGAGAGTTCCACGACTCCCACAGATTCTGAAGTCCAAATTAATCAATACGATGAAAAGCCTCCAGTA AATGATAATAATGAAGCCCCAGAGGACCAGGCTGATCCTATACAAGCTCAAGAATTGCCAGCTCACACGGGAATTGGATCTCAGATCTCTCAACAAGTTC AACAGGCTTCTCAAGAAACTGAGAAGTATGAGAACTCAGAGGACCGTGTTATGCCTACCTTTTCAATTCTGCAGAGAGACACCATTCCTTCATCTCCTGC CGCTCCTGTTGAACAAGTCCTTGTACTGACTTCTGCATCTTTAACCAACTCAACGTCTTCTCAAGAGCTCATGCTCACCACTGCTTCTCAACCAACTATA GAGATTCCATCAATTTCTGTCACCAAAACTCGGCCTGCTTTGAATTTTGAGTCTGTCTTTGCCAGCATGGAACAGTTGATAAACTCAAGTCCAGAGTCTT CTTCTCAGCTTGCGTCAAGCTCTAATTCTCATACTGAATCTCCCAAGTCCAGTAGTGTGAGCTTTGAGGAGACATACAGTTATTCAATGGCTTTGATAAA AAGGATCTTAAGAAAATCCCCAGTAGAAGTGGCCATATCTGCTGATCGCCTGTTGCTTCTGTCCAGTTTGAAGAATTTAAGGAACTGTCCTTTTCTGAAT TCTCAGCAACTAGAAATCATTCAATTCTACCTTGAGAATTTTGAGACCTTGGTGACAAGCCACCCATTTTATGAGCAGAAAATTGACTGGACTAAAGTAG TGAAGTTCTGTATTGAAGATGACAAAAGGGAAATTACTGAGTTGAAGACATCTTATGAAGAACTTACCAGAAAGATCAACATCCTTAGTGCTGAAAAGGA AGCATTAAGTAAAAAGCTTCGGGAAATTGAAGAAGAAGAAGATCACATCCGAGCAAACATGGAAGGTCTCTATGCCCAGCTCGTTAGCCAAAAAGGAAAA CTAGAAACAAATATGAATGCTCTTGCAGAAGCCGTGAGGCAAGAACGAGAGACAGCGGATAGAGCTTGCAATATTGATCGCTATTGGGCTAAGCTCCAGG GCTTATTTGCTGAAGTTTGA
AA sequence Show only first row Show all	>Potri.019G036875.1 pacid=42774222 polypeptide=Potri.019G036875.1.p locus=Potri.019G036875 ID=Potri.019G036875.1.v4.1 annot-version=v4.1 MEALLSSIIDVSITHLIRHISYPLEYKKNAEKLTHQIDKLKAMRDRVRGAVEEAELNGEMITIDVKCWLQDVNKIIEEVDLVLSVENERARRFPFGSCLS IKSHYQVGRKAKKLAYEVSELQMSGKFDAITSHSAPPWMFDGDHESLPSRLLLCKAIMDALKDDDINMVGVYGIGGVGKTTLVKQVAVQAKEQKLFDVVL MVVVSEALNIRRIQEQIADMLGLHLDADTDEGRSCQLYEKLKHENNILLILDDLWERLDLERIGIPSKDEHSGCKILFVSRIPDVLSNQMGCQRTFEVLS LSDEEAWELFKNTIGDDLVNPFMRSFAVEIAKKCSGLPVVIVSVARYLKKKKSLTEFKKVLKELRSSSLTSSTTSQNINAVLEMRYNCLESDQLKSAFLL YGLMGDNASIRNLLRYGLGLGLFPDAVSLEEAQYIAQSMVRKLGDSSLLFDHNVGEQFAQAVHDAAVSIADRYHHVLTTDNEIQVKQLDNDAQRQLRQIW LHGNISELPADLECPQLDLFQIFNDNHYLKIADNFFSRMHKLRVLGLSNLSLSSLPSSVSLLENLQTLCLDRSTLDDISAIGDLKRLEILSFFQSNIKQL PREIAQLTKLRLLDLSDCFELEVIPPDVFSKLSMLEELYMRNSFHQWDAEGKNNASLAELENLSHLTNAEIHIQDSQVLPYGIIFERLKKYRVCIGDDWD WDGAYEMLRTAKLKLNTKIDHRNYGIRMLLNRTEDLYLFEIEGVNIIQELDREGFPHLKHLQLRNSFEIQYIISTMEMVSSNAFPILESLILYDLSSLKK ICHGALRVESFAKLRIIAVEHCNKLTNLFSFFVARGLSQLQKIKIAFCMKMEEVVAEESDELGDQNEVVDVIQFTQLYSLSLQYLPHLMNFYSKVKPSSL SRTQPKPSITEARSEEIISEDELRTPTQLFNEKILFPNLEDLNLYAINIDKLWNDQHPSISVSIQNLQRLVVNQCGSLKYLFPSSLVNILVQLKHLSITN CMSVEEIIAIGGLKEEETTSTVFPKLEFMELSDLPKLRRFCIGSSIECPLLKRMRICACPEFKTFAADFSCANINDGNELEEVNSEENNNNVIQSLFGEK VIFPSLAEIEISHIDNLEKIWHNNLAAGSFCELRSIKIRGCKKIVNIFPSVLIRSFMRLEVLEIGFCDLLEAIFDLKGPSVDEIQPSSVVQLRDLSLNSL PKLKHIWNKDPQGKHKFHNLQIVRAFSCGVLKNLFPFSIARVLRQLEKLEIVHCGVEQIVAKEEGGEAFPYFMFPRLTSLDLIEIRKFRNFYPGKHTWEC PRLKSLAVSGCGNIKYFDSKFLYLQEVQGEIDPTVPIQQPLFSDEEIISNLEELSLNGEDPATSIIWCCQFPGKFYSRLKVIKLKNFYGKLDPIPFGFLQ SIRNLETLSVSCSSFEKIFLNEGCVDKDEDIRGPVDSDEYTRMRARLKNLVIDSVQDITHIWEPKYRLISVVQNLESLKMQSCNSLVNLAPSTVLFHNLE TLDVHSCHGLSNLLTSSTAKSLGQLVKLIVVNCKLVTEIVAKQGGEINDDIIFSKLEYLELVRLENLTSFCPGNYNFIFPSLKGMVVEQCPKMRIFSQGI SSTPKLQGVYWKKDSMNEKCWHGNLNATLQQLYTKMVGCNGIWSLKLSDFPQLKDRWHGQLPFNCFSNLGNLTVDNCAIVSTAIPSNILKFMNNLKYLHV KNCESLEGVFDLEGLSAQAGYDRLLPNLQELHLVDLPELRHIWNRDLPGILDFRNLKRLKVHNCSSLRNIFSPSMASGLVQLERIGIRNCALMDEIVVNK GTEAETEVMFHKLKHLALVCLPRLASFHLGYCAIKLPSLECVLVQECPQMKTFSQGVVSTPKLRKVVQKEFGDSVHWAHDLNATIHKLFIEMSDIVVQSK LLSLPNEPTQDKNGQHTGSEGQASENLHVTEYPDGTKEYPPVPQKAFNTKEHVIKSEPEIIQLTSRYQESLTASNDEEESSTTPTDSEVQINQYDEKPPV NDNNEAPEDQADPIQAQELPAHTGIGSQISQQVQQASQETEKYENSEDRVMPTFSILQRDTIPSSPAAPVEQVLVLTSASLTNSTSSQELMLTTASQPTI EIPSISVTKTRPALNFESVFASMEQLINSSPESSSQLASSSNSHTESPKSSSVSFEETYSYSMALIKRILRKSPVEVAISADRLLLLSSLKNLRNCPFLN SQQLEIIQFYLENFETLVTSHPFYEQKIDWTKVVKFCIEDDKREITELKTSYEELTRKINILSAEKEALSKKLREIEEEEDHIRANMEGLYAQLVSQKGK LETNMNALAEAVRQERETADRACNIDRYWAKLQGLFAEV

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G27190			NB-ARC domain-containing disea...		Potri.019G036875 [exp]	0	1
AT5G01720			RNI-like superfamily protein (...		Potri.006G105400 [exp]	1.00	0.9046
AT3G13050		AtNiaP	nicotinate transporter, Major ...		Potri.018G150700 [exp]	1.41	0.8986
AT1G78060			Glycosyl hydrolase family prot...		Potri.005G168400 [exp]	2.44	0.8838
AT1G19640		JMT	jasmonic acid carboxyl methylt...		Potri.014G168232 [exp]	4.00	0.8622
AT2G33770		ATUBC24, UBC24,...	UBIQUITIN-CONJUGATING ENZYME 2...		Potri.011G052600 [exp]	5.00	0.8714
AT5G04870		AK1, ATCPK1, CP...	calcium dependent protein kina...		Potri.008G014700 [exp]	5.38	0.8407	Pt-CPK2.2
AT1G76680		OPR1, ATOPR1	ARABIDOPSIS 12-OXOPHYTODIENOAT...		Potri.003G004600 [exp]	5.47	0.8565
AT5G26600			Pyridoxal phosphate (PLP)-depe...		Potri.013G002400 [exp]	5.91	0.8664
AT4G27190			NB-ARC domain-containing disea...		Potri.018G145532 [exp]	8.94	0.8554
AT2G35050			Protein kinase superfamily pro...		Potri.001G123500 [exp]	9.00	0.8621

Compare expression of checked genes

Potri.019G036875 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.